Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.131e-12■■□□□ 12.1
MATR3P43243 ACSF3-216ENST00000562204 581 ntTSL 313.85□□□□□ -0.191e-12■■□□□ 12.1
MATR3P43243 ACSF3-210ENST00000538340 434 ntTSL 512.2□□□□□ -0.461e-12■■□□□ 12.1
MATR3P43243 ACSF3-209ENST00000537895 550 ntTSL 48.86□□□□□ -0.991e-12■■□□□ 12.1
MATR3P43243 XXYLT1-206ENST00000455281 557 ntTSL 420.99■□□□□ 0.952e-6■■□□□ 12.1
MATR3P43243 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.762e-6■■□□□ 12.1
MATR3P43243 PSMC2-204ENST00000457587 682 ntTSL 311.39□□□□□ -0.593e-6■■□□□ 12
MATR3P43243 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.913e-6■■□□□ 12
MATR3P43243 PSMC2-202ENST00000425206 656 ntTSL 38.81□□□□□ -13e-6■■□□□ 12
MATR3P43243 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.033e-6■■□□□ 12
MATR3P43243 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.315e-6■■□□□ 12
MATR3P43243 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.315e-6■■□□□ 12
MATR3P43243 PIK3CB-202ENST00000461451 667 ntTSL 226.08■■□□□ 1.779e-6■■□□□ 12
MATR3P43243 PIK3CB-210ENST00000483968 721 ntTSL 324.56■■□□□ 1.529e-6■■□□□ 12
MATR3P43243 TOP3B-205ENST00000434517 736 ntTSL 523.49■■□□□ 1.359e-6■■□□□ 12
MATR3P43243 ATF1-202ENST00000549612 568 ntTSL 521.3■■□□□ 19e-6■■□□□ 12
MATR3P43243 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.74■□□□□ 0.439e-6■■□□□ 12
MATR3P43243 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.377e-12■■□□□ 12
MATR3P43243 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.377e-12■■□□□ 12
MATR3P43243 TOP3B-211ENST00000449704 543 ntTSL 317.23■□□□□ 0.359e-6■■□□□ 12
MATR3P43243 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.339e-6■■□□□ 12
MATR3P43243 TOP3B-204ENST00000430142 582 ntTSL 216.39■□□□□ 0.219e-6■■□□□ 12
MATR3P43243 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.199e-6■■□□□ 12
MATR3P43243 VPS33B-205ENST00000556096 1731 ntTSL 215.9■□□□□ 0.149e-6■■□□□ 12
MATR3P43243 FCHO2-204ENST00000507345 726 ntTSL 515.68■□□□□ 0.19e-6■■□□□ 12
MATR3P43243 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.28■□□□□ 0.049e-6■■□□□ 12
MATR3P43243 VPS33B-208ENST00000574755 2356 ntTSL 215.23■□□□□ 0.039e-6■■□□□ 12
MATR3P43243 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.025e-9■■□□□ 12
MATR3P43243 TOP3B-213ENST00000457179 3061 ntTSL 515.01□□□□□ -0.019e-6■■□□□ 12
MATR3P43243 PPME1-208ENST00000543525 1928 ntTSL 1 (best)14.82□□□□□ -0.049e-6■■□□□ 12
MATR3P43243 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC14.54□□□□□ -0.089e-6■■□□□ 12
MATR3P43243 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.19e-6■■□□□ 12
MATR3P43243 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC14.1□□□□□ -0.155e-9■■□□□ 12
MATR3P43243 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.169e-6■■□□□ 12
MATR3P43243 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.219e-6■■□□□ 12
MATR3P43243 TOP3B-207ENST00000437103 571 ntTSL 413.47□□□□□ -0.259e-6■■□□□ 12
MATR3P43243 PPME1-202ENST00000398427 2496 ntTSL 1 (best) BASIC12.45□□□□□ -0.429e-6■■□□□ 12
MATR3P43243 CCT6P3-202ENST00000426828 2238 ntTSL 1 (best) BASIC12.37□□□□□ -0.439e-6■■□□□ 12
MATR3P43243 ATF1-204ENST00000552487 745 ntTSL 512.2□□□□□ -0.469e-6■■□□□ 12
MATR3P43243 FCHO2-202ENST00000430046 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.489e-6■■□□□ 12
MATR3P43243 TOP3B-210ENST00000444502 4163 ntTSL 212.02□□□□□ -0.489e-6■■□□□ 12
MATR3P43243 TOP3B-203ENST00000424393 824 ntTSL 511.94□□□□□ -0.59e-6■■□□□ 12
MATR3P43243 TOP3B-212ENST00000456075 561 ntTSL 411.38□□□□□ -0.599e-6■■□□□ 12
MATR3P43243 EIF2B3-203ENST00000372183 1457 ntTSL 1 (best) BASIC11.37□□□□□ -0.599e-6■■□□□ 12
MATR3P43243 FCHO2-201ENST00000287761 1287 ntTSL 1 (best) BASIC10.25□□□□□ -0.779e-6■■□□□ 12
MATR3P43243 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.945e-9■■□□□ 12
MATR3P43243 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC9.15□□□□□ -0.945e-9■■□□□ 12
MATR3P43243 TOP3B-208ENST00000437929 550 ntTSL 47.43□□□□□ -1.229e-6■■□□□ 12
MATR3P43243 EIF2B3-204ENST00000439363 892 ntTSL 36.5□□□□□ -1.379e-6■■□□□ 12
MATR3P43243 VPS33B-203ENST00000554264 389 ntTSL 46.29□□□□□ -1.49e-6■■□□□ 12
MATR3P43243 STX3-202ENST00000528805 615 ntTSL 1 (best)5.59□□□□□ -1.519e-6■■□□□ 12
MATR3P43243 ATF1-205ENST00000552510 549 ntTSL 54.98□□□□□ -1.619e-6■■□□□ 12
MATR3P43243 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.7□□□□□ -1.669e-6■■□□□ 12
MATR3P43243 ATF1-203ENST00000551831 970 ntTSL 24.2□□□□□ -1.749e-6■■□□□ 12
MATR3P43243 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.079e-6■■□□□ 12
MATR3P43243 SORBS1-215ENST00000474353 2906 ntTSL 210.65□□□□□ -0.72e-6■■□□□ 12
MATR3P43243 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.712e-6■■□□□ 12
MATR3P43243 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.722e-6■■□□□ 12
MATR3P43243 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.992e-6■■□□□ 12
MATR3P43243 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.052e-6■■□□□ 12
MATR3P43243 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.12e-6■■□□□ 12
MATR3P43243 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.142e-6■■□□□ 12
MATR3P43243 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.93■■□□□ 1.589e-7■■□□□ 12
MATR3P43243 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.349e-7■■□□□ 12
MATR3P43243 TMEM165-205ENST00000508404 1657 ntTSL 223.28■■□□□ 1.329e-7■■□□□ 12
MATR3P43243 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.321e-6■■□□□ 12
MATR3P43243 ARID4B-204ENST00000418304 1759 ntTSL 519.11■□□□□ 0.653e-6■■□□□ 11.9
MATR3P43243 ARID4B-208ENST00000466653 2315 ntTSL 219.06■□□□□ 0.643e-6■■□□□ 11.9
MATR3P43243 SSUH2-214ENST00000484585 554 ntTSL 414.89□□□□□ -0.031e-9■■□□□ 11.9
MATR3P43243 SSUH2-206ENST00000427408 559 ntTSL 314.88□□□□□ -0.031e-9■■□□□ 11.9
MATR3P43243 SSUH2-213ENST00000483845 482 ntTSL 313□□□□□ -0.331e-9■■□□□ 11.9
MATR3P43243 SSUH2-210ENST00000466215 492 ntTSL 312.18□□□□□ -0.461e-9■■□□□ 11.9
MATR3P43243 SLC5A6-204ENST00000412471 917 ntTSL 531.92■■■□□ 2.74e-7■■□□□ 11.9
MATR3P43243 SLC5A6-206ENST00000426119 676 ntTSL 325.84■■□□□ 1.734e-7■■□□□ 11.9
MATR3P43243 SLC5A6-207ENST00000428518 570 ntTSL 418.14■□□□□ 0.494e-7■■□□□ 11.9
MATR3P43243 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.484e-7■■□□□ 11.9
MATR3P43243 SLC5A6-208ENST00000430186 599 ntTSL 417.82■□□□□ 0.444e-7■■□□□ 11.9
MATR3P43243 SLC5A6-205ENST00000414408 741 ntTSL 516.88■□□□□ 0.294e-7■■□□□ 11.9
MATR3P43243 SLC5A6-202ENST00000401463 732 ntTSL 315.14■□□□□ 0.014e-7■■□□□ 11.9
MATR3P43243 SLC5A6-210ENST00000442731 542 ntTSL 415.09■□□□□ 0.014e-7■■□□□ 11.9
MATR3P43243 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.314e-7■■□□□ 11.9
MATR3P43243 SLC5A6-217ENST00000488743 3174 ntTSL 213.08□□□□□ -0.324e-7■■□□□ 11.9
MATR3P43243 SLC5A6-211ENST00000445802 871 ntTSL 512.45□□□□□ -0.424e-7■■□□□ 11.9
MATR3P43243 SLC5A6-209ENST00000432106 725 ntTSL 311.62□□□□□ -0.554e-7■■□□□ 11.9
MATR3P43243 TSPAN9-204ENST00000444315 570 ntTSL 418.47■□□□□ 0.552e-6■■□□□ 11.9
MATR3P43243 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.212e-6■■□□□ 11.9
MATR3P43243 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.232e-6■■□□□ 11.9
MATR3P43243 SEPT9-227ENST00000590059 670 ntTSL 522.94■■□□□ 1.261e-10■■□□□ 11.9
MATR3P43243 SEPT9-245ENST00000592481 1291 ntTSL 522.74■■□□□ 1.231e-10■■□□□ 11.9
MATR3P43243 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.164e-8■■□□□ 11.9
MATR3P43243 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.861e-10■■□□□ 11.9
MATR3P43243 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.811e-10■■□□□ 11.9
MATR3P43243 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.38■□□□□ 0.691e-10■■□□□ 11.9
MATR3P43243 SEPT9-215ENST00000586521 601 ntTSL 419.13■□□□□ 0.651e-10■■□□□ 11.9
MATR3P43243 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.641e-10■■□□□ 11.9
MATR3P43243 SEPT9-221ENST00000588958 879 ntTSL 218■□□□□ 0.471e-10■■□□□ 11.9
MATR3P43243 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.311e-10■■□□□ 11.9
MATR3P43243 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.87■□□□□ 0.291e-10■■□□□ 11.9
MATR3P43243 SEPT9-210ENST00000585929 906 ntTSL 416.61■□□□□ 0.251e-10■■□□□ 11.9
MATR3P43243 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.15■□□□□ 0.181e-10■■□□□ 11.9
Retrieved 100 of 16,209 protein–RNA pairs in 439.6 ms