RNA–Protein interactions for RNA: ENST00000466215.5

SSUH2-210, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 3

Gene SSUH2, Length 492 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-210ENST00000466215 NISCHQ9Y2I1 1504 aa27.97■■■□□ 2.07
SSUH2-210ENST00000466215 ABCC9O60706 1549 aa25.28■■□□□ 1.64
SSUH2-210ENST00000466215 CCDC180Q9P1Z9 1646 aa25.23■■□□□ 1.63
SSUH2-210ENST00000466215 RB1CC1Q8TDY2 1594 aa24.1■■□□□ 1.45
SSUH2-210ENST00000466215 NACADO15069 1562 aa23.9■■□□□ 1.42
SSUH2-210ENST00000466215 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
SSUH2-210ENST00000466215 DCAF8L2P0C7V8 631 aa23.75■■□□□ 1.39
SSUH2-210ENST00000466215 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
SSUH2-210ENST00000466215 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
SSUH2-210ENST00000466215 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
SSUH2-210ENST00000466215 BICRAQ9NZM4 1560 aa23.33■■□□□ 1.33
SSUH2-210ENST00000466215 ZCCHC6Q5VYS8 1495 aaKnown RBP23.21■■□□□ 1.31
SSUH2-210ENST00000466215 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
SSUH2-210ENST00000466215 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
SSUH2-210ENST00000466215 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
SSUH2-210ENST00000466215 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
SSUH2-210ENST00000466215 CECR2Q9BXF3 1484 aa22.82■■□□□ 1.24
SSUH2-210ENST00000466215 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
SSUH2-210ENST00000466215 DNAJC5Q9H3Z4 198 aa22.4■■□□□ 1.18
SSUH2-210ENST00000466215 NCAPD3P42695 1498 aa22.02■■□□□ 1.12
SSUH2-210ENST00000466215 CUX2O14529 1486 aa21.93■■□□□ 1.1
SSUH2-210ENST00000466215 ERCC6Q03468 1493 aa21.92■■□□□ 1.1
SSUH2-210ENST00000466215 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
SSUH2-210ENST00000466215 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
SSUH2-210ENST00000466215 SMARCA4P51532 1647 aa21.85■■□□□ 1.09
SSUH2-210ENST00000466215 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
SSUH2-210ENST00000466215 BAZ1AQ9NRL2 1556 aaPredicted RBP21.77■■□□□ 1.08
SSUH2-210ENST00000466215 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
SSUH2-210ENST00000466215 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
SSUH2-210ENST00000466215 NESP48681 1621 aa21.65■■□□□ 1.06
SSUH2-210ENST00000466215 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
SSUH2-210ENST00000466215 LAMC3Q9Y6N6 1575 aa21.59■■□□□ 1.05
SSUH2-210ENST00000466215 PDS5BQ9NTI5 1447 aa21.49■■□□□ 1.03
SSUH2-210ENST00000466215 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
SSUH2-210ENST00000466215 KIF21AQ7Z4S6 1674 aa21.42■■□□□ 1.02
SSUH2-210ENST00000466215 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
SSUH2-210ENST00000466215 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
SSUH2-210ENST00000466215 WIZO95785 1651 aa21.31■■□□□ 1
SSUH2-210ENST00000466215 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
SSUH2-210ENST00000466215 WDR62O43379 1518 aa21.18■□□□□ 0.98
SSUH2-210ENST00000466215 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
SSUH2-210ENST00000466215 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
SSUH2-210ENST00000466215 FANCD2Q9BXW9 1451 aa21.09■□□□□ 0.97
SSUH2-210ENST00000466215 CFTRP13569 1480 aa21.05■□□□□ 0.96
SSUH2-210ENST00000466215 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
SSUH2-210ENST00000466215 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
SSUH2-210ENST00000466215 PRDM2Q13029 1718 aa20.92■□□□□ 0.94
SSUH2-210ENST00000466215 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
SSUH2-210ENST00000466215 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
SSUH2-210ENST00000466215 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
SSUH2-210ENST00000466215 ABCC8Q09428 1581 aa20.74■□□□□ 0.91
SSUH2-210ENST00000466215 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
SSUH2-210ENST00000466215 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.9
SSUH2-210ENST00000466215 DNMBPQ6XZF7 1577 aa20.6■□□□□ 0.89
SSUH2-210ENST00000466215 RIMBP3CA6NJZ7 1639 aa20.6■□□□□ 0.89
SSUH2-210ENST00000466215 RIMBP3BA6NNM3 1639 aa20.6■□□□□ 0.89
SSUH2-210ENST00000466215 RIMBP3Q9UFD9 1639 aa20.6■□□□□ 0.89
SSUH2-210ENST00000466215 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
SSUH2-210ENST00000466215 ARHGEF11O15085 1522 aa20.51■□□□□ 0.87
SSUH2-210ENST00000466215 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
SSUH2-210ENST00000466215 CHD1O14646 1710 aa20.46■□□□□ 0.87
SSUH2-210ENST00000466215 AQRO60306 1485 aaKnown RBP eCLIP20.45■□□□□ 0.86
SSUH2-210ENST00000466215 FBLN2P98095 1184 aa20.44■□□□□ 0.86
SSUH2-210ENST00000466215 POLA1P09884 1462 aaPredicted RBP20.43■□□□□ 0.86
SSUH2-210ENST00000466215 CYB5RLQ6IPT4 315 aa20.42■□□□□ 0.86
SSUH2-210ENST00000466215 SOGA1O94964 1423 aa20.39■□□□□ 0.85
SSUH2-210ENST00000466215 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
SSUH2-210ENST00000466215 TRHP20396 242 aaPredicted RBP20.35■□□□□ 0.85
SSUH2-210ENST00000466215 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
SSUH2-210ENST00000466215 TDRD9Q8NDG6 1382 aaKnown RBP20.33■□□□□ 0.84
SSUH2-210ENST00000466215 CUX1P39880 1505 aa20.29■□□□□ 0.84
SSUH2-210ENST00000466215 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
SSUH2-210ENST00000466215 FGD5Q6ZNL6 1462 aa20.29■□□□□ 0.84
SSUH2-210ENST00000466215 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
SSUH2-210ENST00000466215 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
SSUH2-210ENST00000466215 SNAPC4Q5SXM2 1469 aa20.25■□□□□ 0.83
SSUH2-210ENST00000466215 MAGI1Q96QZ7 1491 aaPredicted RBP20.25■□□□□ 0.83
SSUH2-210ENST00000466215 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
SSUH2-210ENST00000466215 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
SSUH2-210ENST00000466215 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
SSUH2-210ENST00000466215 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
SSUH2-210ENST00000466215 PBRM1Q86U86 1689 aa20.14■□□□□ 0.81
SSUH2-210ENST00000466215 GAPVD1Q14C86 1478 aa20.13■□□□□ 0.81
SSUH2-210ENST00000466215 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
SSUH2-210ENST00000466215 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
SSUH2-210ENST00000466215 SUPT5HO00267 1087 aaKnown RBP20.04■□□□□ 0.8
SSUH2-210ENST00000466215 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
SSUH2-210ENST00000466215 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
SSUH2-210ENST00000466215 BIVM-ERCC5R4GMW8 1640 aa19.93■□□□□ 0.78
SSUH2-210ENST00000466215 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
SSUH2-210ENST00000466215 ADAMTS12P58397 1594 aa19.89■□□□□ 0.77
SSUH2-210ENST00000466215 FHAD1B1AJZ9 1412 aa19.88■□□□□ 0.77
SSUH2-210ENST00000466215 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
SSUH2-210ENST00000466215 NUP160Q12769 1436 aa19.86■□□□□ 0.77
SSUH2-210ENST00000466215 CEP170Q5SW79 1584 aa19.86■□□□□ 0.77
SSUH2-210ENST00000466215 ERICH3Q5RHP9 1530 aa19.85■□□□□ 0.77
SSUH2-210ENST00000466215 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
SSUH2-210ENST00000466215 JPH4Q96JJ6 628 aa19.73■□□□□ 0.75
SSUH2-210ENST00000466215 PRG4Q92954 1404 aaPredicted RBP19.71■□□□□ 0.75
SSUH2-210ENST00000466215 NPM1P06748 294 aaKnown RBP eCLIP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms