RNA–Protein interactions for RNA: ENST00000562204.1

ACSF3-216, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 3

Gene ACSF3, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-216ENST00000562204 NISCHQ9Y2I1 1504 aa31.71■■■□□ 2.67
ACSF3-216ENST00000562204 ABCC9O60706 1549 aa29.23■■■□□ 2.27
ACSF3-216ENST00000562204 CCDC180Q9P1Z9 1646 aa28.8■■■□□ 2.2
ACSF3-216ENST00000562204 DNAJC5BQ9UF47 199 aa27.79■■■□□ 2.04
ACSF3-216ENST00000562204 RB1CC1Q8TDY2 1594 aa27.63■■■□□ 2.01
ACSF3-216ENST00000562204 NACADO15069 1562 aa27.29■■□□□ 1.96
ACSF3-216ENST00000562204 UNC13AQ9UPW8 1703 aa27.05■■□□□ 1.92
ACSF3-216ENST00000562204 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
ACSF3-216ENST00000562204 DCAF8L2P0C7V8 631 aa26.86■■□□□ 1.89
ACSF3-216ENST00000562204 BICRAQ9NZM4 1560 aa26.83■■□□□ 1.89
ACSF3-216ENST00000562204 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
ACSF3-216ENST00000562204 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
ACSF3-216ENST00000562204 CC2D2AQ9P2K1 1620 aa26.41■■□□□ 1.82
ACSF3-216ENST00000562204 CECR2Q9BXF3 1484 aa26.39■■□□□ 1.82
ACSF3-216ENST00000562204 EIF4G1Q04637 1599 aaKnown RBP26.22■■□□□ 1.79
ACSF3-216ENST00000562204 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
ACSF3-216ENST00000562204 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
ACSF3-216ENST00000562204 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
ACSF3-216ENST00000562204 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
ACSF3-216ENST00000562204 CUX2O14529 1486 aa25.45■■□□□ 1.66
ACSF3-216ENST00000562204 ERCC6Q03468 1493 aa25.3■■□□□ 1.64
ACSF3-216ENST00000562204 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
ACSF3-216ENST00000562204 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
ACSF3-216ENST00000562204 HMGXB3Q12766 1538 aa25■■□□□ 1.59
ACSF3-216ENST00000562204 SMARCA2P51531 1590 aa24.96■■□□□ 1.59
ACSF3-216ENST00000562204 NESP48681 1621 aa24.95■■□□□ 1.58
ACSF3-216ENST00000562204 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
ACSF3-216ENST00000562204 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.58
ACSF3-216ENST00000562204 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
ACSF3-216ENST00000562204 LAMC3Q9Y6N6 1575 aa24.73■■□□□ 1.55
ACSF3-216ENST00000562204 KIF21AQ7Z4S6 1674 aa24.69■■□□□ 1.54
ACSF3-216ENST00000562204 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
ACSF3-216ENST00000562204 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
ACSF3-216ENST00000562204 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
ACSF3-216ENST00000562204 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
ACSF3-216ENST00000562204 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
ACSF3-216ENST00000562204 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
ACSF3-216ENST00000562204 WDR62O43379 1518 aa24.4■■□□□ 1.5
ACSF3-216ENST00000562204 CADPSQ9ULU8 1353 aa24.34■■□□□ 1.49
ACSF3-216ENST00000562204 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
ACSF3-216ENST00000562204 WIZO95785 1651 aa24.13■■□□□ 1.45
ACSF3-216ENST00000562204 FANCD2Q9BXW9 1451 aa24.12■■□□□ 1.45
ACSF3-216ENST00000562204 OSCARQ8IYS5 282 aa24.07■■□□□ 1.44
ACSF3-216ENST00000562204 CFTRP13569 1480 aa23.98■■□□□ 1.43
ACSF3-216ENST00000562204 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
ACSF3-216ENST00000562204 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
ACSF3-216ENST00000562204 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
ACSF3-216ENST00000562204 URB2Q14146 1524 aaKnown RBP23.96■■□□□ 1.43
ACSF3-216ENST00000562204 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
ACSF3-216ENST00000562204 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
ACSF3-216ENST00000562204 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
ACSF3-216ENST00000562204 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
ACSF3-216ENST00000562204 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
ACSF3-216ENST00000562204 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
ACSF3-216ENST00000562204 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
ACSF3-216ENST00000562204 TOPBP1Q92547 1522 aa23.6■■□□□ 1.37
ACSF3-216ENST00000562204 CHD1O14646 1710 aa23.59■■□□□ 1.37
ACSF3-216ENST00000562204 CYB5RLQ6IPT4 315 aa23.54■■□□□ 1.36
ACSF3-216ENST00000562204 ARAP1Q96P48 1450 aa23.54■■□□□ 1.36
ACSF3-216ENST00000562204 DNMBPQ6XZF7 1577 aa23.5■■□□□ 1.35
ACSF3-216ENST00000562204 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
ACSF3-216ENST00000562204 TRHP20396 242 aaPredicted RBP23.47■■□□□ 1.35
ACSF3-216ENST00000562204 CCDC88BA6NC98 1476 aa23.47■■□□□ 1.35
ACSF3-216ENST00000562204 TARBP1Q13395 1621 aaKnown RBP23.46■■□□□ 1.35
ACSF3-216ENST00000562204 AQRO60306 1485 aaKnown RBP eCLIP23.42■■□□□ 1.34
ACSF3-216ENST00000562204 POLA1P09884 1462 aaPredicted RBP23.33■■□□□ 1.33
ACSF3-216ENST00000562204 FBLN2P98095 1184 aa23.33■■□□□ 1.33
ACSF3-216ENST00000562204 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
ACSF3-216ENST00000562204 SNAPC4Q5SXM2 1469 aa23.22■■□□□ 1.31
ACSF3-216ENST00000562204 RAD54L2Q9Y4B4 1467 aa23.22■■□□□ 1.31
ACSF3-216ENST00000562204 WDR97A6NE52 1622 aa23.22■■□□□ 1.31
ACSF3-216ENST00000562204 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
ACSF3-216ENST00000562204 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
ACSF3-216ENST00000562204 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
ACSF3-216ENST00000562204 SOGA1O94964 1423 aa23.15■■□□□ 1.3
ACSF3-216ENST00000562204 MAGI1Q96QZ7 1491 aaPredicted RBP23.14■■□□□ 1.29
ACSF3-216ENST00000562204 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
ACSF3-216ENST00000562204 CHMP7Q8WUX9 453 aaPredicted RBP23.07■■□□□ 1.28
ACSF3-216ENST00000562204 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
ACSF3-216ENST00000562204 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
ACSF3-216ENST00000562204 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
ACSF3-216ENST00000562204 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
ACSF3-216ENST00000562204 CUX1P39880 1505 aa23■■□□□ 1.27
ACSF3-216ENST00000562204 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
ACSF3-216ENST00000562204 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
ACSF3-216ENST00000562204 ABCA10Q8WWZ4 1543 aa22.81■■□□□ 1.24
ACSF3-216ENST00000562204 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
ACSF3-216ENST00000562204 CEP170Q5SW79 1584 aa22.78■■□□□ 1.24
ACSF3-216ENST00000562204 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
ACSF3-216ENST00000562204 KIF13AQ9H1H9 1805 aa22.75■■□□□ 1.23
ACSF3-216ENST00000562204 SHROOM2Q13796 1616 aa22.73■■□□□ 1.23
ACSF3-216ENST00000562204 NUP160Q12769 1436 aa22.72■■□□□ 1.23
ACSF3-216ENST00000562204 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
ACSF3-216ENST00000562204 FHAD1B1AJZ9 1412 aa22.58■■□□□ 1.21
ACSF3-216ENST00000562204 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
ACSF3-216ENST00000562204 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
ACSF3-216ENST00000562204 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.2
ACSF3-216ENST00000562204 PRG4Q92954 1404 aaPredicted RBP22.51■■□□□ 1.19
ACSF3-216ENST00000562204 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
ACSF3-216ENST00000562204 ABCC10Q5T3U5 1492 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms