RNA–Protein interactions for RNA: ENST00000562204.1

ACSF3-216, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 3

Gene ACSF3, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-216ENST00000562204 NISCHQ9Y2I1 1504 aa31.71■■■□□ 2.67
ACSF3-216ENST00000562204 ABCC9O60706 1549 aa29.23■■■□□ 2.27
ACSF3-216ENST00000562204 CCDC180Q9P1Z9 1646 aa28.8■■■□□ 2.2
ACSF3-216ENST00000562204 DNAJC5BQ9UF47 199 aa27.79■■■□□ 2.04
ACSF3-216ENST00000562204 RB1CC1Q8TDY2 1594 aa27.63■■■□□ 2.01
ACSF3-216ENST00000562204 NACADO15069 1562 aa27.29■■□□□ 1.96
ACSF3-216ENST00000562204 UNC13AQ9UPW8 1703 aa27.05■■□□□ 1.92
ACSF3-216ENST00000562204 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
ACSF3-216ENST00000562204 DCAF8L2P0C7V8 631 aa26.86■■□□□ 1.89
ACSF3-216ENST00000562204 BICRAQ9NZM4 1560 aa26.83■■□□□ 1.89
ACSF3-216ENST00000562204 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
ACSF3-216ENST00000562204 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
ACSF3-216ENST00000562204 CC2D2AQ9P2K1 1620 aa26.41■■□□□ 1.82
ACSF3-216ENST00000562204 CECR2Q9BXF3 1484 aa26.39■■□□□ 1.82
ACSF3-216ENST00000562204 EIF4G1Q04637 1599 aaKnown RBP26.22■■□□□ 1.79
ACSF3-216ENST00000562204 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
ACSF3-216ENST00000562204 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
ACSF3-216ENST00000562204 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
ACSF3-216ENST00000562204 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
ACSF3-216ENST00000562204 CUX2O14529 1486 aa25.45■■□□□ 1.66
ACSF3-216ENST00000562204 ERCC6Q03468 1493 aa25.3■■□□□ 1.64
ACSF3-216ENST00000562204 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
ACSF3-216ENST00000562204 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
ACSF3-216ENST00000562204 HMGXB3Q12766 1538 aa25■■□□□ 1.59
ACSF3-216ENST00000562204 SMARCA2P51531 1590 aa24.96■■□□□ 1.59
ACSF3-216ENST00000562204 NESP48681 1621 aa24.95■■□□□ 1.58
ACSF3-216ENST00000562204 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
ACSF3-216ENST00000562204 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.58
ACSF3-216ENST00000562204 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
ACSF3-216ENST00000562204 LAMC3Q9Y6N6 1575 aa24.73■■□□□ 1.55
ACSF3-216ENST00000562204 KIF21AQ7Z4S6 1674 aa24.69■■□□□ 1.54
ACSF3-216ENST00000562204 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
ACSF3-216ENST00000562204 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
ACSF3-216ENST00000562204 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
ACSF3-216ENST00000562204 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
ACSF3-216ENST00000562204 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
ACSF3-216ENST00000562204 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
ACSF3-216ENST00000562204 WDR62O43379 1518 aa24.4■■□□□ 1.5
ACSF3-216ENST00000562204 CADPSQ9ULU8 1353 aa24.34■■□□□ 1.49
ACSF3-216ENST00000562204 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
ACSF3-216ENST00000562204 WIZO95785 1651 aa24.13■■□□□ 1.45
ACSF3-216ENST00000562204 FANCD2Q9BXW9 1451 aa24.12■■□□□ 1.45
ACSF3-216ENST00000562204 OSCARQ8IYS5 282 aa24.07■■□□□ 1.44
ACSF3-216ENST00000562204 CFTRP13569 1480 aa23.98■■□□□ 1.43
ACSF3-216ENST00000562204 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
ACSF3-216ENST00000562204 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
ACSF3-216ENST00000562204 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
ACSF3-216ENST00000562204 URB2Q14146 1524 aaKnown RBP23.96■■□□□ 1.43
ACSF3-216ENST00000562204 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
ACSF3-216ENST00000562204 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
ACSF3-216ENST00000562204 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
ACSF3-216ENST00000562204 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
ACSF3-216ENST00000562204 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
ACSF3-216ENST00000562204 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
ACSF3-216ENST00000562204 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
ACSF3-216ENST00000562204 TOPBP1Q92547 1522 aa23.6■■□□□ 1.37
ACSF3-216ENST00000562204 CHD1O14646 1710 aa23.59■■□□□ 1.37
ACSF3-216ENST00000562204 CYB5RLQ6IPT4 315 aa23.54■■□□□ 1.36
ACSF3-216ENST00000562204 ARAP1Q96P48 1450 aa23.54■■□□□ 1.36
ACSF3-216ENST00000562204 DNMBPQ6XZF7 1577 aa23.5■■□□□ 1.35
ACSF3-216ENST00000562204 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
ACSF3-216ENST00000562204 TRHP20396 242 aaPredicted RBP23.47■■□□□ 1.35
ACSF3-216ENST00000562204 CCDC88BA6NC98 1476 aa23.47■■□□□ 1.35
ACSF3-216ENST00000562204 TARBP1Q13395 1621 aaKnown RBP23.46■■□□□ 1.35
ACSF3-216ENST00000562204 AQRO60306 1485 aaKnown RBP eCLIP23.42■■□□□ 1.34
ACSF3-216ENST00000562204 POLA1P09884 1462 aaPredicted RBP23.33■■□□□ 1.33
ACSF3-216ENST00000562204 FBLN2P98095 1184 aa23.33■■□□□ 1.33
ACSF3-216ENST00000562204 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
ACSF3-216ENST00000562204 SNAPC4Q5SXM2 1469 aa23.22■■□□□ 1.31
ACSF3-216ENST00000562204 RAD54L2Q9Y4B4 1467 aa23.22■■□□□ 1.31
ACSF3-216ENST00000562204 WDR97A6NE52 1622 aa23.22■■□□□ 1.31
ACSF3-216ENST00000562204 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
ACSF3-216ENST00000562204 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
ACSF3-216ENST00000562204 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
ACSF3-216ENST00000562204 SOGA1O94964 1423 aa23.15■■□□□ 1.3
ACSF3-216ENST00000562204 MAGI1Q96QZ7 1491 aaPredicted RBP23.14■■□□□ 1.29
ACSF3-216ENST00000562204 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
ACSF3-216ENST00000562204 CHMP7Q8WUX9 453 aaPredicted RBP23.07■■□□□ 1.28
ACSF3-216ENST00000562204 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
ACSF3-216ENST00000562204 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
ACSF3-216ENST00000562204 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
ACSF3-216ENST00000562204 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
ACSF3-216ENST00000562204 CUX1P39880 1505 aa23■■□□□ 1.27
ACSF3-216ENST00000562204 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
ACSF3-216ENST00000562204 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
ACSF3-216ENST00000562204 ABCA10Q8WWZ4 1543 aa22.81■■□□□ 1.24
ACSF3-216ENST00000562204 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
ACSF3-216ENST00000562204 CEP170Q5SW79 1584 aa22.78■■□□□ 1.24
ACSF3-216ENST00000562204 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
ACSF3-216ENST00000562204 KIF13AQ9H1H9 1805 aa22.75■■□□□ 1.23
ACSF3-216ENST00000562204 SHROOM2Q13796 1616 aa22.73■■□□□ 1.23
ACSF3-216ENST00000562204 NUP160Q12769 1436 aa22.72■■□□□ 1.23
ACSF3-216ENST00000562204 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
ACSF3-216ENST00000562204 FHAD1B1AJZ9 1412 aa22.58■■□□□ 1.21
ACSF3-216ENST00000562204 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
ACSF3-216ENST00000562204 BIVM-ERCC5R4GMW8 1640 aa22.53■■□□□ 1.2
ACSF3-216ENST00000562204 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.2
ACSF3-216ENST00000562204 PRG4Q92954 1404 aaPredicted RBP22.51■■□□□ 1.19
ACSF3-216ENST00000562204 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
ACSF3-216ENST00000562204 ABCC10Q5T3U5 1492 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms