RNA–Protein interactions for RNA: ENST00000483845.1

SSUH2-213, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 3

Gene SSUH2, Length 482 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-213ENST00000483845 NISCHQ9Y2I1 1504 aa30.11■■■□□ 2.41
SSUH2-213ENST00000483845 CCDC180Q9P1Z9 1646 aa27.13■■□□□ 1.93
SSUH2-213ENST00000483845 ABCC9O60706 1549 aa27.1■■□□□ 1.93
SSUH2-213ENST00000483845 RB1CC1Q8TDY2 1594 aa25.82■■□□□ 1.72
SSUH2-213ENST00000483845 NACADO15069 1562 aa25.61■■□□□ 1.69
SSUH2-213ENST00000483845 DNAJC5BQ9UF47 199 aa25.4■■□□□ 1.66
SSUH2-213ENST00000483845 DCAF8L2P0C7V8 631 aa25.34■■□□□ 1.65
SSUH2-213ENST00000483845 UNC13AQ9UPW8 1703 aa25.29■■□□□ 1.64
SSUH2-213ENST00000483845 MYO15BQ96JP2 1530 aa25.23■■□□□ 1.63
SSUH2-213ENST00000483845 PABPN1Q86U42 306 aaKnown RBP eCLIP25.16■■□□□ 1.62
SSUH2-213ENST00000483845 BICRAQ9NZM4 1560 aa25.05■■□□□ 1.6
SSUH2-213ENST00000483845 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
SSUH2-213ENST00000483845 DCAF1Q9Y4B6 1507 aa24.88■■□□□ 1.57
SSUH2-213ENST00000483845 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
SSUH2-213ENST00000483845 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
SSUH2-213ENST00000483845 CC2D2AQ9P2K1 1620 aa24.52■■□□□ 1.52
SSUH2-213ENST00000483845 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
SSUH2-213ENST00000483845 CECR2Q9BXF3 1484 aa24.43■■□□□ 1.5
SSUH2-213ENST00000483845 NCAPD3P42695 1498 aa23.6■■□□□ 1.37
SSUH2-213ENST00000483845 SMARCA4P51532 1647 aa23.54■■□□□ 1.36
SSUH2-213ENST00000483845 ATAD2BQ9ULI0 1458 aa23.53■■□□□ 1.36
SSUH2-213ENST00000483845 SMARCA2P51531 1590 aa23.5■■□□□ 1.35
SSUH2-213ENST00000483845 HMGXB3Q12766 1538 aa23.48■■□□□ 1.35
SSUH2-213ENST00000483845 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
SSUH2-213ENST00000483845 CUX2O14529 1486 aa23.42■■□□□ 1.34
SSUH2-213ENST00000483845 DNAJC5Q9H3Z4 198 aa23.4■■□□□ 1.34
SSUH2-213ENST00000483845 BAZ1AQ9NRL2 1556 aaPredicted RBP23.4■■□□□ 1.34
SSUH2-213ENST00000483845 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
SSUH2-213ENST00000483845 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
SSUH2-213ENST00000483845 NESP48681 1621 aa23.26■■□□□ 1.31
SSUH2-213ENST00000483845 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
SSUH2-213ENST00000483845 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
SSUH2-213ENST00000483845 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.29
SSUH2-213ENST00000483845 THOC2Q8NI27 1593 aaKnown RBP23.1■■□□□ 1.29
SSUH2-213ENST00000483845 KIF21AQ7Z4S6 1674 aa23.03■■□□□ 1.28
SSUH2-213ENST00000483845 PDS5BQ9NTI5 1447 aa22.96■■□□□ 1.27
SSUH2-213ENST00000483845 WIZO95785 1651 aa22.93■■□□□ 1.26
SSUH2-213ENST00000483845 CADPSQ9ULU8 1353 aa22.87■■□□□ 1.25
SSUH2-213ENST00000483845 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
SSUH2-213ENST00000483845 WDR62O43379 1518 aa22.75■■□□□ 1.23
SSUH2-213ENST00000483845 CEP164Q9UPV0 1460 aa22.69■■□□□ 1.22
SSUH2-213ENST00000483845 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
SSUH2-213ENST00000483845 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
SSUH2-213ENST00000483845 FANCD2Q9BXW9 1451 aa22.64■■□□□ 1.21
SSUH2-213ENST00000483845 CFTRP13569 1480 aa22.61■■□□□ 1.21
SSUH2-213ENST00000483845 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
SSUH2-213ENST00000483845 URB2Q14146 1524 aaKnown RBP22.46■■□□□ 1.19
SSUH2-213ENST00000483845 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
SSUH2-213ENST00000483845 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
SSUH2-213ENST00000483845 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
SSUH2-213ENST00000483845 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
SSUH2-213ENST00000483845 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
SSUH2-213ENST00000483845 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
SSUH2-213ENST00000483845 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
SSUH2-213ENST00000483845 DNMBPQ6XZF7 1577 aa22.15■■□□□ 1.14
SSUH2-213ENST00000483845 CHIC1Q5VXU3 224 aa22.14■■□□□ 1.13
SSUH2-213ENST00000483845 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
SSUH2-213ENST00000483845 RIMBP3CA6NJZ7 1639 aa22.07■■□□□ 1.12
SSUH2-213ENST00000483845 RIMBP3BA6NNM3 1639 aa22.07■■□□□ 1.12
SSUH2-213ENST00000483845 RIMBP3Q9UFD9 1639 aa22.07■■□□□ 1.12
SSUH2-213ENST00000483845 TARBP1Q13395 1621 aaKnown RBP22.04■■□□□ 1.12
SSUH2-213ENST00000483845 CHD1O14646 1710 aa21.99■■□□□ 1.11
SSUH2-213ENST00000483845 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
SSUH2-213ENST00000483845 ARHGEF11O15085 1522 aa21.97■■□□□ 1.11
SSUH2-213ENST00000483845 AQRO60306 1485 aaKnown RBP eCLIP21.96■■□□□ 1.11
SSUH2-213ENST00000483845 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
SSUH2-213ENST00000483845 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
SSUH2-213ENST00000483845 SOGA1O94964 1423 aa21.84■■□□□ 1.09
SSUH2-213ENST00000483845 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.08
SSUH2-213ENST00000483845 CUX1P39880 1505 aa21.8■■□□□ 1.08
SSUH2-213ENST00000483845 FBLN2P98095 1184 aa21.8■■□□□ 1.08
SSUH2-213ENST00000483845 TDRD9Q8NDG6 1382 aaKnown RBP21.79■■□□□ 1.08
SSUH2-213ENST00000483845 SNAPC4Q5SXM2 1469 aa21.77■■□□□ 1.08
SSUH2-213ENST00000483845 CYB5RLQ6IPT4 315 aa21.74■■□□□ 1.07
SSUH2-213ENST00000483845 ARAP1Q96P48 1450 aa21.74■■□□□ 1.07
SSUH2-213ENST00000483845 MAGI1Q96QZ7 1491 aaPredicted RBP21.72■■□□□ 1.07
SSUH2-213ENST00000483845 CLASP1Q7Z460 1538 aa21.7■■□□□ 1.06
SSUH2-213ENST00000483845 GRIN2BQ13224 1484 aa21.69■■□□□ 1.06
SSUH2-213ENST00000483845 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
SSUH2-213ENST00000483845 PBRM1Q86U86 1689 aa21.69■■□□□ 1.06
SSUH2-213ENST00000483845 SYNJ2O15056 1496 aa21.64■■□□□ 1.05
SSUH2-213ENST00000483845 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
SSUH2-213ENST00000483845 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
SSUH2-213ENST00000483845 ABCA5Q8WWZ7 1642 aa21.6■■□□□ 1.05
SSUH2-213ENST00000483845 ABCA10Q8WWZ4 1543 aa21.58■■□□□ 1.04
SSUH2-213ENST00000483845 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
SSUH2-213ENST00000483845 TRHP20396 242 aaPredicted RBP21.53■■□□□ 1.04
SSUH2-213ENST00000483845 BIVM-ERCC5R4GMW8 1640 aa21.48■■□□□ 1.03
SSUH2-213ENST00000483845 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
SSUH2-213ENST00000483845 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
SSUH2-213ENST00000483845 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
SSUH2-213ENST00000483845 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
SSUH2-213ENST00000483845 CEP170Q5SW79 1584 aa21.36■■□□□ 1.01
SSUH2-213ENST00000483845 NUP160Q12769 1436 aa21.34■■□□□ 1.01
SSUH2-213ENST00000483845 ERCC6L2Q5T890 1561 aa21.33■■□□□ 1.01
SSUH2-213ENST00000483845 ERICH3Q5RHP9 1530 aa21.33■■□□□ 1
SSUH2-213ENST00000483845 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
SSUH2-213ENST00000483845 SHROOM2Q13796 1616 aa21.3■■□□□ 1
SSUH2-213ENST00000483845 RUSC2Q8N2Y8 1516 aa21.15■□□□□ 0.98
SSUH2-213ENST00000483845 PRG4Q92954 1404 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 393 ms