RNA–Protein interactions for RNA: ENST00000371249.6

SORBS1-212, Transcript of sorbin and SH3 domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SORBS1, Length 5,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS1-212ENST00000371249 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
SORBS1-212ENST00000371249 DCAF8L2P0C7V8 631 aa14.75□□□□□ -0.05
SORBS1-212ENST00000371249 CCDC180Q9P1Z9 1646 aa14.65□□□□□ -0.06
SORBS1-212ENST00000371249 SHROOM4Q9ULL8 1493 aa14.36□□□□□ -0.11
SORBS1-212ENST00000371249 ZCCHC6Q5VYS8 1495 aaKnown RBP14.22□□□□□ -0.13
SORBS1-212ENST00000371249 ABCC9O60706 1549 aa14.17□□□□□ -0.14
SORBS1-212ENST00000371249 SUPT5HO00267 1087 aaKnown RBP13.97□□□□□ -0.17
SORBS1-212ENST00000371249 DCAF1Q9Y4B6 1507 aa13.89□□□□□ -0.19
SORBS1-212ENST00000371249 NACADO15069 1562 aa13.77□□□□□ -0.2
SORBS1-212ENST00000371249 SCRIBQ14160 1630 aa13.74□□□□□ -0.21
SORBS1-212ENST00000371249 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
SORBS1-212ENST00000371249 MYO15BQ96JP2 1530 aa13.68□□□□□ -0.22
SORBS1-212ENST00000371249 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
SORBS1-212ENST00000371249 RSF1Q96T23 1441 aaPredicted RBP13.25□□□□□ -0.29
SORBS1-212ENST00000371249 CECR2Q9BXF3 1484 aa13.22□□□□□ -0.29
SORBS1-212ENST00000371249 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
SORBS1-212ENST00000371249 MROH2BQ7Z745 1585 aa13.12□□□□□ -0.31
SORBS1-212ENST00000371249 CHIC1Q5VXU3 224 aa13.11□□□□□ -0.31
SORBS1-212ENST00000371249 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
SORBS1-212ENST00000371249 UNC13AQ9UPW8 1703 aa13.09□□□□□ -0.31
SORBS1-212ENST00000371249 SMARCA4P51532 1647 aa13.02□□□□□ -0.32
SORBS1-212ENST00000371249 BICRAQ9NZM4 1560 aa13.02□□□□□ -0.32
SORBS1-212ENST00000371249 WIZO95785 1651 aa13.02□□□□□ -0.33
SORBS1-212ENST00000371249 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
SORBS1-212ENST00000371249 BAZ1BQ9UIG0 1483 aaKnown RBP12.94□□□□□ -0.34
SORBS1-212ENST00000371249 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
SORBS1-212ENST00000371249 TOP2AP11388 1531 aaKnown RBP12.91□□□□□ -0.34
SORBS1-212ENST00000371249 SMARCA2P51531 1590 aa12.91□□□□□ -0.34
SORBS1-212ENST00000371249 ATAD2BQ9ULI0 1458 aa12.85□□□□□ -0.35
SORBS1-212ENST00000371249 CCDC88BA6NC98 1476 aa12.83□□□□□ -0.36
SORBS1-212ENST00000371249 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
SORBS1-212ENST00000371249 LOC105371045A0A1W2PR82 267 aa12.73□□□□□ -0.37
SORBS1-212ENST00000371249 NCAPD3P42695 1498 aa12.69□□□□□ -0.38
SORBS1-212ENST00000371249 PEG3Q9GZU2 1588 aa12.69□□□□□ -0.38
SORBS1-212ENST00000371249 UBTFP17480 764 aaKnown RBP12.64□□□□□ -0.39
SORBS1-212ENST00000371249 HMGXB3Q12766 1538 aa12.64□□□□□ -0.39
SORBS1-212ENST00000371249 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
SORBS1-212ENST00000371249 WRNQ14191 1432 aaPredicted RBP eCLIP12.62□□□□□ -0.39
SORBS1-212ENST00000371249 ABCC8Q09428 1581 aa12.61□□□□□ -0.39
SORBS1-212ENST00000371249 RANGAP1P46060 587 aaPredicted RBP12.53□□□□□ -0.4
SORBS1-212ENST00000371249 CSRNP3Q8WYN3 585 aa12.53□□□□□ -0.4
SORBS1-212ENST00000371249 CADPSQ9ULU8 1353 aa12.52□□□□□ -0.41
SORBS1-212ENST00000371249 EEA1Q15075 1411 aa12.47□□□□□ -0.41
SORBS1-212ENST00000371249 APLP2Q06481 763 aa12.46□□□□□ -0.41
SORBS1-212ENST00000371249 CFTRP13569 1480 aa12.43□□□□□ -0.42
SORBS1-212ENST00000371249 SOGA1O94964 1423 aa12.42□□□□□ -0.42
SORBS1-212ENST00000371249 PDS5BQ9NTI5 1447 aa12.4□□□□□ -0.42
SORBS1-212ENST00000371249 PCGF6Q9BYE7 350 aa12.4□□□□□ -0.42
SORBS1-212ENST00000371249 FANCD2Q9BXW9 1451 aa12.39□□□□□ -0.43
SORBS1-212ENST00000371249 TTBK1Q5TCY1 1321 aaPredicted RBP12.38□□□□□ -0.43
SORBS1-212ENST00000371249 KIF27Q86VH2 1401 aa12.36□□□□□ -0.43
SORBS1-212ENST00000371249 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
SORBS1-212ENST00000371249 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
SORBS1-212ENST00000371249 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
SORBS1-212ENST00000371249 PPARGC1BQ86YN6 1023 aaKnown RBP12.32□□□□□ -0.44
SORBS1-212ENST00000371249 NESP48681 1621 aa12.32□□□□□ -0.44
SORBS1-212ENST00000371249 ERCC6Q03468 1493 aa12.32□□□□□ -0.44
SORBS1-212ENST00000371249 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
SORBS1-212ENST00000371249 CUX2O14529 1486 aa12.3□□□□□ -0.44
SORBS1-212ENST00000371249 RUSC2Q8N2Y8 1516 aa12.29□□□□□ -0.44
SORBS1-212ENST00000371249 TRIM26Q12899 539 aaPredicted RBP12.29□□□□□ -0.44
SORBS1-212ENST00000371249 DNAJC5BQ9UF47 199 aa12.28□□□□□ -0.44
SORBS1-212ENST00000371249 ATP1B4Q9UN42 357 aaPredicted RBP12.28□□□□□ -0.44
SORBS1-212ENST00000371249 LAMC3Q9Y6N6 1575 aa12.27□□□□□ -0.44
SORBS1-212ENST00000371249 CUX1P39880 1505 aa12.27□□□□□ -0.44
SORBS1-212ENST00000371249 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.45
SORBS1-212ENST00000371249 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
SORBS1-212ENST00000371249 CEP162Q5TB80 1403 aa12.24□□□□□ -0.45
SORBS1-212ENST00000371249 BIVM-ERCC5R4GMW8 1640 aa12.21□□□□□ -0.45
SORBS1-212ENST00000371249 CLIP1P30622 1438 aa12.2□□□□□ -0.46
SORBS1-212ENST00000371249 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
SORBS1-212ENST00000371249 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
SORBS1-212ENST00000371249 CARMIL1Q5VZK9 1371 aa12.18□□□□□ -0.46
SORBS1-212ENST00000371249 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
SORBS1-212ENST00000371249 FBLN2P98095 1184 aa12.16□□□□□ -0.46
SORBS1-212ENST00000371249 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
SORBS1-212ENST00000371249 RAPGEF2Q9Y4G8 1499 aa12.15□□□□□ -0.46
SORBS1-212ENST00000371249 TDRD9Q8NDG6 1382 aaKnown RBP12.15□□□□□ -0.47
SORBS1-212ENST00000371249 MRC2Q9UBG0 1479 aa12.14□□□□□ -0.47
SORBS1-212ENST00000371249 P3H3Q8IVL6 736 aa12.13□□□□□ -0.47
SORBS1-212ENST00000371249 KIF21BO75037 1637 aa12.12□□□□□ -0.47
SORBS1-212ENST00000371249 POLA1P09884 1462 aaPredicted RBP12.12□□□□□ -0.47
SORBS1-212ENST00000371249 IGF1RP08069 1367 aa12.09□□□□□ -0.47
SORBS1-212ENST00000371249 URB2Q14146 1524 aaKnown RBP12.09□□□□□ -0.47
SORBS1-212ENST00000371249 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
SORBS1-212ENST00000371249 GAPVD1Q14C86 1478 aa12.06□□□□□ -0.48
SORBS1-212ENST00000371249 ERICH3Q5RHP9 1530 aa12.06□□□□□ -0.48
SORBS1-212ENST00000371249 KIF21AQ7Z4S6 1674 aa12.05□□□□□ -0.48
SORBS1-212ENST00000371249 ABCA10Q8WWZ4 1543 aa12.05□□□□□ -0.48
SORBS1-212ENST00000371249 PRXQ9BXM0 1461 aa12.04□□□□□ -0.48
SORBS1-212ENST00000371249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
SORBS1-212ENST00000371249 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
SORBS1-212ENST00000371249 IFT140Q96RY7 1462 aa12.01□□□□□ -0.49
SORBS1-212ENST00000371249 CCER1Q8TC90 406 aaPredicted RBP12□□□□□ -0.49
SORBS1-212ENST00000371249 VPS8Q8N3P4 1428 aa12□□□□□ -0.49
SORBS1-212ENST00000371249 AQRO60306 1485 aaKnown RBP eCLIP11.99□□□□□ -0.491e-6■■■■□ 25.3
SORBS1-212ENST00000371249 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
SORBS1-212ENST00000371249 GRIN2BQ13224 1484 aa11.95□□□□□ -0.5
SORBS1-212ENST00000371249 ITGAEP38570 1179 aa11.95□□□□□ -0.5
SORBS1-212ENST00000371249 CUL7Q14999 1698 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms