RNA–Protein interactions for RNA: ENST00000310574.7

SLC5A6-201, Transcript of solute carrier family 5 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC5A6, Length 3,231 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-201ENST00000310574 NISCHQ9Y2I1 1504 aa22.45■■□□□ 1.18
SLC5A6-201ENST00000310574 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
SLC5A6-201ENST00000310574 HRCP23327 699 aa19.85■□□□□ 0.77
SLC5A6-201ENST00000310574 PPARGC1BQ86YN6 1023 aaKnown RBP19.7■□□□□ 0.74
SLC5A6-201ENST00000310574 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
SLC5A6-201ENST00000310574 PCGF6Q9BYE7 350 aa19.38■□□□□ 0.69
SLC5A6-201ENST00000310574 MYT1Q01538 1121 aa19.37■□□□□ 0.69
SLC5A6-201ENST00000310574 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
SLC5A6-201ENST00000310574 SCAF1Q9H7N4 1312 aaKnown RBP19.26■□□□□ 0.67
SLC5A6-201ENST00000310574 ZCCHC6Q5VYS8 1495 aaKnown RBP19.01■□□□□ 0.63
SLC5A6-201ENST00000310574 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
SLC5A6-201ENST00000310574 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
SLC5A6-201ENST00000310574 CHIC1Q5VXU3 224 aa18.83■□□□□ 0.61
SLC5A6-201ENST00000310574 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
SLC5A6-201ENST00000310574 GTF3C3Q9Y5Q9 886 aa18.55■□□□□ 0.56
SLC5A6-201ENST00000310574 NEUROD1Q13562 356 aa18.53■□□□□ 0.56
SLC5A6-201ENST00000310574 ACIN1Q9UKV3 1341 aaKnown RBP18.52■□□□□ 0.55
SLC5A6-201ENST00000310574 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
SLC5A6-201ENST00000310574 BCL11AQ9H165 835 aa18.34■□□□□ 0.53
SLC5A6-201ENST00000310574 LOC105371045A0A1W2PR82 267 aa18.33■□□□□ 0.53
SLC5A6-201ENST00000310574 TRIM26Q12899 539 aaPredicted RBP18.33■□□□□ 0.52
SLC5A6-201ENST00000310574 ZEB1P37275 1124 aaPredicted RBP18.31■□□□□ 0.52
SLC5A6-201ENST00000310574 TTBK1Q5TCY1 1321 aaPredicted RBP18.26■□□□□ 0.51
SLC5A6-201ENST00000310574 CENPBP07199 599 aaPredicted RBP18.23■□□□□ 0.51
SLC5A6-201ENST00000310574 FAM9AQ8IZU1 332 aaPredicted RBP18.19■□□□□ 0.5
SLC5A6-201ENST00000310574 PRKCSHP14314 528 aaPredicted RBP18.09■□□□□ 0.49
SLC5A6-201ENST00000310574 YTHDC1Q96MU7 727 aaKnown RBP18■□□□□ 0.47
SLC5A6-201ENST00000310574 TRIM41Q8WV44 630 aa17.99■□□□□ 0.47
SLC5A6-201ENST00000310574 ABCC9O60706 1549 aa17.98■□□□□ 0.47
SLC5A6-201ENST00000310574 DIEXFQ68CQ4 756 aaKnown RBP17.93■□□□□ 0.46
SLC5A6-201ENST00000310574 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
SLC5A6-201ENST00000310574 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
SLC5A6-201ENST00000310574 ANP32EQ9BTT0 268 aa17.82■□□□□ 0.44
SLC5A6-201ENST00000310574 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
SLC5A6-201ENST00000310574 CSRNP3Q8WYN3 585 aa17.77■□□□□ 0.43
SLC5A6-201ENST00000310574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
SLC5A6-201ENST00000310574 RB1CC1Q8TDY2 1594 aa17.73■□□□□ 0.43
SLC5A6-201ENST00000310574 CCER1Q8TC90 406 aaPredicted RBP17.69■□□□□ 0.42
SLC5A6-201ENST00000310574 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.4
SLC5A6-201ENST00000310574 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
SLC5A6-201ENST00000310574 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
SLC5A6-201ENST00000310574 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
SLC5A6-201ENST00000310574 NACADO15069 1562 aa17.47■□□□□ 0.39
SLC5A6-201ENST00000310574 MIER1Q8N108 512 aa17.42■□□□□ 0.38
SLC5A6-201ENST00000310574 WIZO95785 1651 aa17.39■□□□□ 0.37
SLC5A6-201ENST00000310574 SUPT16HQ9Y5B9 1047 aaKnown RBP17.38■□□□□ 0.37
SLC5A6-201ENST00000310574 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
SLC5A6-201ENST00000310574 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
SLC5A6-201ENST00000310574 APLP2Q06481 763 aa17.24■□□□□ 0.35
SLC5A6-201ENST00000310574 BCANQ96GW7 911 aa17.23■□□□□ 0.35
SLC5A6-201ENST00000310574 ANO8Q9HCE9 1232 aaPredicted RBP17.22■□□□□ 0.35
SLC5A6-201ENST00000310574 UBTFP17480 764 aaKnown RBP17.15■□□□□ 0.34
SLC5A6-201ENST00000310574 EIF4G1Q04637 1599 aaKnown RBP17.14■□□□□ 0.34
SLC5A6-201ENST00000310574 CEP162Q5TB80 1403 aa17.14■□□□□ 0.33
SLC5A6-201ENST00000310574 ABCC8Q09428 1581 aa17.14■□□□□ 0.33
SLC5A6-201ENST00000310574 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
SLC5A6-201ENST00000310574 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
SLC5A6-201ENST00000310574 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
SLC5A6-201ENST00000310574 TNIKQ9UKE5 1360 aa17.09■□□□□ 0.33
SLC5A6-201ENST00000310574 SOGA1O94964 1423 aa17.06■□□□□ 0.32
SLC5A6-201ENST00000310574 EEA1Q15075 1411 aa17.04■□□□□ 0.32
SLC5A6-201ENST00000310574 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
SLC5A6-201ENST00000310574 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
SLC5A6-201ENST00000310574 SMARCA2P51531 1590 aa17.02■□□□□ 0.31
SLC5A6-201ENST00000310574 CCDC136Q96JN2 1154 aa17.02■□□□□ 0.31
SLC5A6-201ENST00000310574 CLSPNQ9HAW4 1339 aa17.01■□□□□ 0.31
SLC5A6-201ENST00000310574 SALL2Q9Y467 1007 aaPredicted RBP16.95■□□□□ 0.3
SLC5A6-201ENST00000310574 GOLGA3Q08378 1498 aa16.95■□□□□ 0.3
SLC5A6-201ENST00000310574 MSH5O43196 834 aa16.94■□□□□ 0.3
SLC5A6-201ENST00000310574 RUSC2Q8N2Y8 1516 aa16.94■□□□□ 0.3
SLC5A6-201ENST00000310574 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
SLC5A6-201ENST00000310574 ITGAEP38570 1179 aa16.91■□□□□ 0.3
SLC5A6-201ENST00000310574 FKBP8Q14318 412 aa16.91■□□□□ 0.3
SLC5A6-201ENST00000310574 DEKP35659 375 aaKnown RBP16.89■□□□□ 0.29
SLC5A6-201ENST00000310574 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
SLC5A6-201ENST00000310574 PABPN1Q86U42 306 aaKnown RBP eCLIP16.81■□□□□ 0.28
SLC5A6-201ENST00000310574 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
SLC5A6-201ENST00000310574 CLIP1P30622 1438 aa16.8■□□□□ 0.28
SLC5A6-201ENST00000310574 RANGAP1P46060 587 aaPredicted RBP16.77■□□□□ 0.28
SLC5A6-201ENST00000310574 UNC13AQ9UPW8 1703 aa16.77■□□□□ 0.28
SLC5A6-201ENST00000310574 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
SLC5A6-201ENST00000310574 VPS8Q8N3P4 1428 aa16.72■□□□□ 0.27
SLC5A6-201ENST00000310574 NEFLP07196 543 aa16.71■□□□□ 0.27
SLC5A6-201ENST00000310574 KIF21BO75037 1637 aa16.71■□□□□ 0.27
SLC5A6-201ENST00000310574 NBR1Q14596 966 aa16.7■□□□□ 0.26
SLC5A6-201ENST00000310574 KCNH8Q96L42 1107 aa16.69■□□□□ 0.26
SLC5A6-201ENST00000310574 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
SLC5A6-201ENST00000310574 UBE2Q2Q8WVN8 375 aa16.67■□□□□ 0.26
SLC5A6-201ENST00000310574 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
SLC5A6-201ENST00000310574 RAPGEF2Q9Y4G8 1499 aa16.63■□□□□ 0.25
SLC5A6-201ENST00000310574 PEG3Q9GZU2 1588 aa16.62■□□□□ 0.25
SLC5A6-201ENST00000310574 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
SLC5A6-201ENST00000310574 IL27Q8NEV9 243 aa16.6■□□□□ 0.25
SLC5A6-201ENST00000310574 BICRAQ9NZM4 1560 aa16.58■□□□□ 0.24
SLC5A6-201ENST00000310574 ATAD2BQ9ULI0 1458 aa16.56■□□□□ 0.24
SLC5A6-201ENST00000310574 EIF5BO60841 1220 aaKnown RBP16.55■□□□□ 0.24
SLC5A6-201ENST00000310574 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
SLC5A6-201ENST00000310574 ERICH6BQ5W0A0 696 aa16.52■□□□□ 0.24
SLC5A6-201ENST00000310574 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
SLC5A6-201ENST00000310574 DHX57Q6P158 1386 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms