RNA–Protein interactions for RNA: ENST00000428518.5

SLC5A6-207, Transcript of solute carrier family 5 member 6, humanhuman

TSL 4

Gene SLC5A6, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-207ENST00000428518 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
SLC5A6-207ENST00000428518 CCDC180Q9P1Z9 1646 aa34.65■■■■□ 3.14
SLC5A6-207ENST00000428518 ABCC9O60706 1549 aa33.27■■■□□ 2.92
SLC5A6-207ENST00000428518 ZCCHC6Q5VYS8 1495 aaKnown RBP32.83■■■□□ 2.85
SLC5A6-207ENST00000428518 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.79
SLC5A6-207ENST00000428518 DCAF8L2P0C7V8 631 aa32.49■■■□□ 2.79
SLC5A6-207ENST00000428518 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
SLC5A6-207ENST00000428518 NACADO15069 1562 aa32.41■■■□□ 2.78
SLC5A6-207ENST00000428518 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
SLC5A6-207ENST00000428518 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
SLC5A6-207ENST00000428518 UNC13AQ9UPW8 1703 aa31.64■■■□□ 2.66
SLC5A6-207ENST00000428518 SHROOM4Q9ULL8 1493 aa31.36■■■□□ 2.61
SLC5A6-207ENST00000428518 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
SLC5A6-207ENST00000428518 PABPN1Q86U42 306 aaKnown RBP eCLIP31.18■■■□□ 2.58
SLC5A6-207ENST00000428518 CECR2Q9BXF3 1484 aa30.5■■■□□ 2.47
SLC5A6-207ENST00000428518 EIF4G1Q04637 1599 aaKnown RBP30.41■■■□□ 2.46
SLC5A6-207ENST00000428518 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
SLC5A6-207ENST00000428518 SMARCA4P51532 1647 aa30.33■■■□□ 2.45
SLC5A6-207ENST00000428518 MROH2BQ7Z745 1585 aa30.26■■■□□ 2.43
SLC5A6-207ENST00000428518 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.42
SLC5A6-207ENST00000428518 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
SLC5A6-207ENST00000428518 PEG3Q9GZU2 1588 aa30.03■■■□□ 2.4
SLC5A6-207ENST00000428518 ATAD2BQ9ULI0 1458 aa29.99■■■□□ 2.39
SLC5A6-207ENST00000428518 SMARCA2P51531 1590 aa29.99■■■□□ 2.39
SLC5A6-207ENST00000428518 WIZO95785 1651 aa29.99■■■□□ 2.39
SLC5A6-207ENST00000428518 DNAJC5BQ9UF47 199 aa29.96■■■□□ 2.39
SLC5A6-207ENST00000428518 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
SLC5A6-207ENST00000428518 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
SLC5A6-207ENST00000428518 HMGXB3Q12766 1538 aa29.8■■■□□ 2.36
SLC5A6-207ENST00000428518 BAZ1BQ9UIG0 1483 aaKnown RBP29.78■■■□□ 2.36
SLC5A6-207ENST00000428518 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
SLC5A6-207ENST00000428518 CCDC88BA6NC98 1476 aa29.33■■■□□ 2.29
SLC5A6-207ENST00000428518 CADPSQ9ULU8 1353 aa29.03■■■□□ 2.24
SLC5A6-207ENST00000428518 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.23
SLC5A6-207ENST00000428518 CFTRP13569 1480 aa29■■■□□ 2.23
SLC5A6-207ENST00000428518 NESP48681 1621 aa28.98■■■□□ 2.23
SLC5A6-207ENST00000428518 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
SLC5A6-207ENST00000428518 PDS5BQ9NTI5 1447 aa28.76■■■□□ 2.19
SLC5A6-207ENST00000428518 FANCD2Q9BXW9 1451 aa28.71■■■□□ 2.19
SLC5A6-207ENST00000428518 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.18
SLC5A6-207ENST00000428518 ERCC6Q03468 1493 aa28.61■■■□□ 2.17
SLC5A6-207ENST00000428518 CEP164Q9UPV0 1460 aa28.61■■■□□ 2.17
SLC5A6-207ENST00000428518 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
SLC5A6-207ENST00000428518 MRC2Q9UBG0 1479 aa28.45■■■□□ 2.14
SLC5A6-207ENST00000428518 THOC2Q8NI27 1593 aaKnown RBP28.42■■■□□ 2.14
SLC5A6-207ENST00000428518 URB2Q14146 1524 aaKnown RBP28.39■■■□□ 2.14
SLC5A6-207ENST00000428518 WRNQ14191 1432 aaPredicted RBP eCLIP28.39■■■□□ 2.14
SLC5A6-207ENST00000428518 DNMBPQ6XZF7 1577 aa28.36■■■□□ 2.13
SLC5A6-207ENST00000428518 CUX1P39880 1505 aa28.35■■■□□ 2.13
SLC5A6-207ENST00000428518 WDR62O43379 1518 aa28.34■■■□□ 2.13
SLC5A6-207ENST00000428518 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
SLC5A6-207ENST00000428518 SYNJ1O43426 1573 aa28.32■■■□□ 2.12
SLC5A6-207ENST00000428518 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
SLC5A6-207ENST00000428518 TOP2BQ02880 1626 aa28.29■■■□□ 2.12
SLC5A6-207ENST00000428518 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
SLC5A6-207ENST00000428518 FGD5Q6ZNL6 1462 aa28.15■■■□□ 2.1
SLC5A6-207ENST00000428518 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
SLC5A6-207ENST00000428518 POLA1P09884 1462 aaPredicted RBP28.13■■■□□ 2.09
SLC5A6-207ENST00000428518 CUX2O14529 1486 aa28.09■■■□□ 2.09
SLC5A6-207ENST00000428518 SOGA1O94964 1423 aa28.01■■■□□ 2.08
SLC5A6-207ENST00000428518 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
SLC5A6-207ENST00000428518 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
SLC5A6-207ENST00000428518 IFT140Q96RY7 1462 aa27.99■■■□□ 2.07
SLC5A6-207ENST00000428518 WDR97A6NE52 1622 aa27.93■■■□□ 2.06
SLC5A6-207ENST00000428518 ABCA10Q8WWZ4 1543 aa27.91■■■□□ 2.06
SLC5A6-207ENST00000428518 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
SLC5A6-207ENST00000428518 TDRD9Q8NDG6 1382 aaKnown RBP27.77■■■□□ 2.04
SLC5A6-207ENST00000428518 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
SLC5A6-207ENST00000428518 EIF4G3O43432 1585 aaKnown RBP27.75■■■□□ 2.03
SLC5A6-207ENST00000428518 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
SLC5A6-207ENST00000428518 AQRO60306 1485 aaKnown RBP eCLIP27.73■■■□□ 2.033e-6■■■■□ 19.7
SLC5A6-207ENST00000428518 RUSC2Q8N2Y8 1516 aa27.71■■■□□ 2.03
SLC5A6-207ENST00000428518 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.03
SLC5A6-207ENST00000428518 PBRM1Q86U86 1689 aa27.66■■■□□ 2.02
SLC5A6-207ENST00000428518 EEA1Q15075 1411 aa27.63■■■□□ 2.01
SLC5A6-207ENST00000428518 GRIN2BQ13224 1484 aa27.61■■■□□ 2.01
SLC5A6-207ENST00000428518 ERICH3Q5RHP9 1530 aa27.59■■■□□ 2.01
SLC5A6-207ENST00000428518 IGF1RP08069 1367 aa27.55■■■□□ 2
SLC5A6-207ENST00000428518 FAM9AQ8IZU1 332 aaPredicted RBP27.53■■■□□ 2
SLC5A6-207ENST00000428518 SNAPC4Q5SXM2 1469 aa27.5■■□□□ 1.99
SLC5A6-207ENST00000428518 CSRNP3Q8WYN3 585 aa27.49■■□□□ 1.99
SLC5A6-207ENST00000428518 MAGI1Q96QZ7 1491 aaPredicted RBP27.48■■□□□ 1.99
SLC5A6-207ENST00000428518 CUL7Q14999 1698 aa27.48■■□□□ 1.99
SLC5A6-207ENST00000428518 ADAMTS12P58397 1594 aa27.45■■□□□ 1.99
SLC5A6-207ENST00000428518 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
SLC5A6-207ENST00000428518 CARMIL1Q5VZK9 1371 aa27.4■■□□□ 1.98
SLC5A6-207ENST00000428518 PRXQ9BXM0 1461 aa27.38■■□□□ 1.97
SLC5A6-207ENST00000428518 SYNJ2O15056 1496 aa27.37■■□□□ 1.97
SLC5A6-207ENST00000428518 KIF21BO75037 1637 aa27.33■■□□□ 1.97
SLC5A6-207ENST00000428518 RAPGEF2Q9Y4G8 1499 aa27.32■■□□□ 1.96
SLC5A6-207ENST00000428518 CHD1O14646 1710 aa27.31■■□□□ 1.96
SLC5A6-207ENST00000428518 CHMP7Q8WUX9 453 aaPredicted RBP27.28■■□□□ 1.96
SLC5A6-207ENST00000428518 GRIN2AQ12879 1464 aa27.26■■□□□ 1.95
SLC5A6-207ENST00000428518 FBLN2P98095 1184 aa27.25■■□□□ 1.95
SLC5A6-207ENST00000428518 GOLGA3Q08378 1498 aa27.19■■□□□ 1.94
SLC5A6-207ENST00000428518 CEP170Q5SW79 1584 aa27.13■■□□□ 1.93
SLC5A6-207ENST00000428518 EHMT2Q96KQ7 1210 aa27.12■■□□□ 1.93
SLC5A6-207ENST00000428518 NUP160Q12769 1436 aa27.12■■□□□ 1.93
SLC5A6-207ENST00000428518 CTTNBP2Q8WZ74 1663 aa27.08■■□□□ 1.93
SLC5A6-207ENST00000428518 LOC105371045A0A1W2PR82 267 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms