RNA–Protein interactions for RNA: ENST00000427408.1

SSUH2-206, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 3

Gene SSUH2, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-206ENST00000427408 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
SSUH2-206ENST00000427408 ABCC9O60706 1549 aa30.27■■■□□ 2.44
SSUH2-206ENST00000427408 CCDC180Q9P1Z9 1646 aa30.2■■■□□ 2.43
SSUH2-206ENST00000427408 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
SSUH2-206ENST00000427408 DCAF8L2P0C7V8 631 aa28.71■■■□□ 2.19
SSUH2-206ENST00000427408 NACADO15069 1562 aa28.6■■■□□ 2.17
SSUH2-206ENST00000427408 DNAJC5BQ9UF47 199 aa28.41■■■□□ 2.14
SSUH2-206ENST00000427408 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.127e-8■□□□□ 9.5
SSUH2-206ENST00000427408 MYO15BQ96JP2 1530 aa28.24■■■□□ 2.11
SSUH2-206ENST00000427408 ZCCHC6Q5VYS8 1495 aaKnown RBP28.1■■■□□ 2.09
SSUH2-206ENST00000427408 UNC13AQ9UPW8 1703 aa28.04■■■□□ 2.08
SSUH2-206ENST00000427408 BICRAQ9NZM4 1560 aa27.98■■■□□ 2.07
SSUH2-206ENST00000427408 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
SSUH2-206ENST00000427408 SCRIBQ14160 1630 aa27.66■■■□□ 2.02
SSUH2-206ENST00000427408 SHROOM4Q9ULL8 1493 aa27.51■■□□□ 1.99
SSUH2-206ENST00000427408 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
SSUH2-206ENST00000427408 EIF4G1Q04637 1599 aaKnown RBP27.25■■□□□ 1.95
SSUH2-206ENST00000427408 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
SSUH2-206ENST00000427408 NCAPD3P42695 1498 aa26.48■■□□□ 1.83
SSUH2-206ENST00000427408 ATAD2BQ9ULI0 1458 aa26.43■■□□□ 1.82
SSUH2-206ENST00000427408 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
SSUH2-206ENST00000427408 SMARCA2P51531 1590 aa26.29■■□□□ 1.8
SSUH2-206ENST00000427408 BAZ1AQ9NRL2 1556 aaPredicted RBP26.24■■□□□ 1.79
SSUH2-206ENST00000427408 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
SSUH2-206ENST00000427408 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
SSUH2-206ENST00000427408 BAZ1BQ9UIG0 1483 aaKnown RBP26.14■■□□□ 1.78
SSUH2-206ENST00000427408 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
SSUH2-206ENST00000427408 ERCC6Q03468 1493 aa26.08■■□□□ 1.77
SSUH2-206ENST00000427408 NESP48681 1621 aa26.06■■□□□ 1.76
SSUH2-206ENST00000427408 CUX2O14529 1486 aa25.94■■□□□ 1.74
SSUH2-206ENST00000427408 DNAJC5Q9H3Z4 198 aa25.9■■□□□ 1.74
SSUH2-206ENST00000427408 WIZO95785 1651 aa25.8■■□□□ 1.72
SSUH2-206ENST00000427408 LAMC3Q9Y6N6 1575 aa25.76■■□□□ 1.71
SSUH2-206ENST00000427408 CADPSQ9ULU8 1353 aa25.71■■□□□ 1.71
SSUH2-206ENST00000427408 RSF1Q96T23 1441 aaPredicted RBP25.7■■□□□ 1.7
SSUH2-206ENST00000427408 PDS5BQ9NTI5 1447 aa25.7■■□□□ 1.7
SSUH2-206ENST00000427408 THOC2Q8NI27 1593 aaKnown RBP25.65■■□□□ 1.7
SSUH2-206ENST00000427408 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.69
SSUH2-206ENST00000427408 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
SSUH2-206ENST00000427408 MRC2Q9UBG0 1479 aa25.45■■□□□ 1.66
SSUH2-206ENST00000427408 CFTRP13569 1480 aa25.41■■□□□ 1.66
SSUH2-206ENST00000427408 FANCD2Q9BXW9 1451 aa25.39■■□□□ 1.65
SSUH2-206ENST00000427408 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
SSUH2-206ENST00000427408 WDR62O43379 1518 aa25.35■■□□□ 1.65
SSUH2-206ENST00000427408 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
SSUH2-206ENST00000427408 URB2Q14146 1524 aaKnown RBP25.18■■□□□ 1.62
SSUH2-206ENST00000427408 PRDM2Q13029 1718 aa24.95■■□□□ 1.59
SSUH2-206ENST00000427408 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
SSUH2-206ENST00000427408 OSCARQ8IYS5 282 aa24.9■■□□□ 1.58
SSUH2-206ENST00000427408 ZNF608Q9ULD9 1512 aaPredicted RBP24.88■■□□□ 1.57
SSUH2-206ENST00000427408 IFT140Q96RY7 1462 aa24.87■■□□□ 1.57
SSUH2-206ENST00000427408 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
SSUH2-206ENST00000427408 ABCC8Q09428 1581 aa24.81■■□□□ 1.56
SSUH2-206ENST00000427408 DNMBPQ6XZF7 1577 aa24.79■■□□□ 1.56
SSUH2-206ENST00000427408 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.55
SSUH2-206ENST00000427408 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.54
SSUH2-206ENST00000427408 POLA1P09884 1462 aaPredicted RBP24.68■■□□□ 1.54
SSUH2-206ENST00000427408 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.54
SSUH2-206ENST00000427408 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.54
SSUH2-206ENST00000427408 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
SSUH2-206ENST00000427408 SOGA1O94964 1423 aa24.61■■□□□ 1.53
SSUH2-206ENST00000427408 TDRD9Q8NDG6 1382 aaKnown RBP24.58■■□□□ 1.53
SSUH2-206ENST00000427408 CUX1P39880 1505 aa24.56■■□□□ 1.52
SSUH2-206ENST00000427408 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
SSUH2-206ENST00000427408 FBLN2P98095 1184 aa24.53■■□□□ 1.52
SSUH2-206ENST00000427408 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.5
SSUH2-206ENST00000427408 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.5
SSUH2-206ENST00000427408 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.5
SSUH2-206ENST00000427408 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
SSUH2-206ENST00000427408 CHD1O14646 1710 aa24.39■■□□□ 1.5
SSUH2-206ENST00000427408 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
SSUH2-206ENST00000427408 CYB5RLQ6IPT4 315 aa24.35■■□□□ 1.49
SSUH2-206ENST00000427408 CHMP7Q8WUX9 453 aaPredicted RBP24.35■■□□□ 1.49
SSUH2-206ENST00000427408 GRIN2BQ13224 1484 aa24.33■■□□□ 1.49
SSUH2-206ENST00000427408 WDR97A6NE52 1622 aa24.31■■□□□ 1.48
SSUH2-206ENST00000427408 GAPVD1Q14C86 1478 aa24.28■■□□□ 1.48
SSUH2-206ENST00000427408 MAGI1Q96QZ7 1491 aaPredicted RBP24.28■■□□□ 1.48
SSUH2-206ENST00000427408 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
SSUH2-206ENST00000427408 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
SSUH2-206ENST00000427408 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
SSUH2-206ENST00000427408 WRNQ14191 1432 aaPredicted RBP eCLIP24.21■■□□□ 1.47
SSUH2-206ENST00000427408 CLASP1Q7Z460 1538 aa24.18■■□□□ 1.46
SSUH2-206ENST00000427408 ABCA5Q8WWZ7 1642 aa24.16■■□□□ 1.46
SSUH2-206ENST00000427408 SYNJ1O43426 1573 aa24.15■■□□□ 1.46
SSUH2-206ENST00000427408 TOP2BQ02880 1626 aa24.13■■□□□ 1.45
SSUH2-206ENST00000427408 PBRM1Q86U86 1689 aa24.11■■□□□ 1.45
SSUH2-206ENST00000427408 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
SSUH2-206ENST00000427408 GRIN2AQ12879 1464 aa24■■□□□ 1.43
SSUH2-206ENST00000427408 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
SSUH2-206ENST00000427408 ADAMTS12P58397 1594 aa23.98■■□□□ 1.43
SSUH2-206ENST00000427408 FHAD1B1AJZ9 1412 aa23.97■■□□□ 1.43
SSUH2-206ENST00000427408 NUP160Q12769 1436 aa23.94■■□□□ 1.42
SSUH2-206ENST00000427408 ERICH3Q5RHP9 1530 aa23.92■■□□□ 1.42
SSUH2-206ENST00000427408 CEP170Q5SW79 1584 aa23.91■■□□□ 1.42
SSUH2-206ENST00000427408 ERCC6L2Q5T890 1561 aa23.88■■□□□ 1.41
SSUH2-206ENST00000427408 IGF1RP08069 1367 aa23.78■■□□□ 1.4
SSUH2-206ENST00000427408 JPH4Q96JJ6 628 aa23.78■■□□□ 1.4
SSUH2-206ENST00000427408 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
SSUH2-206ENST00000427408 PRG4Q92954 1404 aaPredicted RBP23.74■■□□□ 1.39
SSUH2-206ENST00000427408 KIF27Q86VH2 1401 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms