RNA–Protein interactions for RNA: ENST00000592420.1

SEPT9-244, Transcript of septin 9, humanhuman

TSL 2 BASIC

Gene SEPT9, Length 2,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-244ENST00000592420 NISCHQ9Y2I1 1504 aa30.25■■■□□ 2.43
SEPT9-244ENST00000592420 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
SEPT9-244ENST00000592420 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
SEPT9-244ENST00000592420 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
SEPT9-244ENST00000592420 MYO15BQ96JP2 1530 aa25.45■■□□□ 1.66
SEPT9-244ENST00000592420 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
SEPT9-244ENST00000592420 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
SEPT9-244ENST00000592420 HRCP23327 699 aa25.39■■□□□ 1.66
SEPT9-244ENST00000592420 PCGF6Q9BYE7 350 aa25.07■■□□□ 1.6
SEPT9-244ENST00000592420 DCAF8L2P0C7V8 631 aa24.99■■□□□ 1.59
SEPT9-244ENST00000592420 PPARGC1BQ86YN6 1023 aaKnown RBP24.84■■□□□ 1.57
SEPT9-244ENST00000592420 DCAF1Q9Y4B6 1507 aa24.8■■□□□ 1.56
SEPT9-244ENST00000592420 LOC105371045A0A1W2PR82 267 aa24.72■■□□□ 1.55
SEPT9-244ENST00000592420 TRIM26Q12899 539 aaPredicted RBP24.46■■□□□ 1.51
SEPT9-244ENST00000592420 ABCC9O60706 1549 aa24.28■■□□□ 1.48
SEPT9-244ENST00000592420 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
SEPT9-244ENST00000592420 ZEB1P37275 1124 aaPredicted RBP24.07■■□□□ 1.44
SEPT9-244ENST00000592420 TRIM41Q8WV44 630 aa24.04■■□□□ 1.44
SEPT9-244ENST00000592420 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
SEPT9-244ENST00000592420 RB1CC1Q8TDY2 1594 aa23.94■■□□□ 1.42
SEPT9-244ENST00000592420 FAM9AQ8IZU1 332 aaPredicted RBP23.91■■□□□ 1.42
SEPT9-244ENST00000592420 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
SEPT9-244ENST00000592420 EHMT2Q96KQ7 1210 aa23.7■■□□□ 1.38
SEPT9-244ENST00000592420 PELP1Q8IZL8 1130 aaKnown RBP23.64■■□□□ 1.38
SEPT9-244ENST00000592420 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
SEPT9-244ENST00000592420 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
SEPT9-244ENST00000592420 WIZO95785 1651 aa23.46■■□□□ 1.35
SEPT9-244ENST00000592420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.43■■□□□ 1.34
SEPT9-244ENST00000592420 NACADO15069 1562 aa23.41■■□□□ 1.34
SEPT9-244ENST00000592420 CCER1Q8TC90 406 aaPredicted RBP23.34■■□□□ 1.33
SEPT9-244ENST00000592420 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
SEPT9-244ENST00000592420 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
SEPT9-244ENST00000592420 ACIN1Q9UKV3 1341 aaKnown RBP23.29■■□□□ 1.32
SEPT9-244ENST00000592420 NEUROD1Q13562 356 aa23.25■■□□□ 1.31
SEPT9-244ENST00000592420 WRNQ14191 1432 aaPredicted RBP eCLIP23.18■■□□□ 1.38e-8■■■■■ 37.6
SEPT9-244ENST00000592420 DIEXFQ68CQ4 756 aaKnown RBP23.16■■□□□ 1.3
SEPT9-244ENST00000592420 CCDC88BA6NC98 1476 aa23.12■■□□□ 1.29
SEPT9-244ENST00000592420 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
SEPT9-244ENST00000592420 CEP162Q5TB80 1403 aa23.07■■□□□ 1.28
SEPT9-244ENST00000592420 TTBK1Q5TCY1 1321 aaPredicted RBP23.05■■□□□ 1.28
SEPT9-244ENST00000592420 TOP2AP11388 1531 aaKnown RBP23.04■■□□□ 1.28
SEPT9-244ENST00000592420 GTF3C3Q9Y5Q9 886 aa23.04■■□□□ 1.28
SEPT9-244ENST00000592420 CENPBP07199 599 aaPredicted RBP23.01■■□□□ 1.27
SEPT9-244ENST00000592420 TNIKQ9UKE5 1360 aa23.01■■□□□ 1.27
SEPT9-244ENST00000592420 SOGA1O94964 1423 aa23.01■■□□□ 1.27
SEPT9-244ENST00000592420 SMARCA2P51531 1590 aa22.97■■□□□ 1.27
SEPT9-244ENST00000592420 SMARCA4P51532 1647 aa22.92■■□□□ 1.26
SEPT9-244ENST00000592420 RUSC2Q8N2Y8 1516 aa22.9■■□□□ 1.26
SEPT9-244ENST00000592420 CSRNP3Q8WYN3 585 aa22.9■■□□□ 1.26
SEPT9-244ENST00000592420 ZNF316A6NFI3 1004 aaPredicted RBP22.87■■□□□ 1.25
SEPT9-244ENST00000592420 EEA1Q15075 1411 aa22.86■■□□□ 1.25
SEPT9-244ENST00000592420 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.24
SEPT9-244ENST00000592420 GOLGA3Q08378 1498 aa22.76■■□□□ 1.23
SEPT9-244ENST00000592420 UNC13AQ9UPW8 1703 aa22.67■■□□□ 1.22
SEPT9-244ENST00000592420 MIER1Q8N108 512 aa22.64■■□□□ 1.22
SEPT9-244ENST00000592420 YTHDC1Q96MU7 727 aaKnown RBP22.63■■□□□ 1.21
SEPT9-244ENST00000592420 HNRNPUL2Q1KMD3 747 aaKnown RBP22.63■■□□□ 1.21
SEPT9-244ENST00000592420 CEP164Q9UPV0 1460 aa22.58■■□□□ 1.2
SEPT9-244ENST00000592420 KIF21BO75037 1637 aa22.55■■□□□ 1.2
SEPT9-244ENST00000592420 CLIP1P30622 1438 aa22.54■■□□□ 1.2
SEPT9-244ENST00000592420 MYT1Q01538 1121 aa22.53■■□□□ 1.2
SEPT9-244ENST00000592420 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
SEPT9-244ENST00000592420 VPS8Q8N3P4 1428 aa22.5■■□□□ 1.19
SEPT9-244ENST00000592420 PEG3Q9GZU2 1588 aa22.45■■□□□ 1.18
SEPT9-244ENST00000592420 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
SEPT9-244ENST00000592420 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
SEPT9-244ENST00000592420 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.17
SEPT9-244ENST00000592420 BICRAQ9NZM4 1560 aa22.39■■□□□ 1.17
SEPT9-244ENST00000592420 APLP2Q06481 763 aa22.37■■□□□ 1.17
SEPT9-244ENST00000592420 RANGAP1P46060 587 aaPredicted RBP22.28■■□□□ 1.16
SEPT9-244ENST00000592420 CLSPNQ9HAW4 1339 aa22.26■■□□□ 1.15
SEPT9-244ENST00000592420 DHX57Q6P158 1386 aaKnown RBP22.26■■□□□ 1.15
SEPT9-244ENST00000592420 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
SEPT9-244ENST00000592420 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
SEPT9-244ENST00000592420 KANK4Q5T7N3 995 aaPredicted RBP22.15■■□□□ 1.14
SEPT9-244ENST00000592420 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
SEPT9-244ENST00000592420 PRXQ9BXM0 1461 aa22.12■■□□□ 1.13
SEPT9-244ENST00000592420 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
SEPT9-244ENST00000592420 SUPT16HQ9Y5B9 1047 aaKnown RBP22.09■■□□□ 1.13
SEPT9-244ENST00000592420 BIVM-ERCC5R4GMW8 1640 aa22.07■■□□□ 1.12
SEPT9-244ENST00000592420 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
SEPT9-244ENST00000592420 CUX2O14529 1486 aa22.01■■□□□ 1.11
SEPT9-244ENST00000592420 CCNB3Q8WWL7 1395 aa21.93■■□□□ 1.1
SEPT9-244ENST00000592420 CUX1P39880 1505 aa21.9■■□□□ 1.1
SEPT9-244ENST00000592420 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
SEPT9-244ENST00000592420 TSHZ2Q9NRE2 1034 aa21.87■■□□□ 1.09
SEPT9-244ENST00000592420 KIF27Q86VH2 1401 aa21.87■■□□□ 1.09
SEPT9-244ENST00000592420 KCNH8Q96L42 1107 aa21.87■■□□□ 1.09
SEPT9-244ENST00000592420 ITGAEP38570 1179 aa21.84■■□□□ 1.09
SEPT9-244ENST00000592420 MAPKBP1O60336 1514 aa21.82■■□□□ 1.08
SEPT9-244ENST00000592420 RAB3GAP2Q9H2M9 1393 aa21.82■■□□□ 1.08
SEPT9-244ENST00000592420 NCAPD3P42695 1498 aa21.72■■□□□ 1.07
SEPT9-244ENST00000592420 HMGXB3Q12766 1538 aa21.7■■□□□ 1.07
SEPT9-244ENST00000592420 SETD5Q9C0A6 1442 aa21.69■■□□□ 1.06
SEPT9-244ENST00000592420 TIAM1Q13009 1591 aa21.69■■□□□ 1.06
SEPT9-244ENST00000592420 MAP3K1Q13233 1512 aa21.69■■□□□ 1.06
SEPT9-244ENST00000592420 CFTRP13569 1480 aa21.68■■□□□ 1.06
SEPT9-244ENST00000592420 WDR97A6NE52 1622 aa21.67■■□□□ 1.06
SEPT9-244ENST00000592420 DDX10Q13206 875 aaKnown RBP21.66■■□□□ 1.06
SEPT9-244ENST00000592420 SIN3AQ96ST3 1273 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms