RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 DCAF8L2P0C7V8 631 aa24.74■■□□□ 1.55
UBR2-201ENST00000372899 PELP1Q8IZL8 1130 aaKnown RBP23.2■■□□□ 1.3
UBR2-201ENST00000372899 FAM9AQ8IZU1 332 aaPredicted RBP23.01■■□□□ 1.27
UBR2-201ENST00000372899 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
UBR2-201ENST00000372899 EHMT2Q96KQ7 1210 aa22.73■■□□□ 1.23
UBR2-201ENST00000372899 APLP2Q06481 763 aa22.71■■□□□ 1.23
UBR2-201ENST00000372899 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.17
UBR2-201ENST00000372899 CCER1Q8TC90 406 aaPredicted RBP22.21■■□□□ 1.15
UBR2-201ENST00000372899 SHROOM4Q9ULL8 1493 aa22.15■■□□□ 1.14
UBR2-201ENST00000372899 ATP1B4Q9UN42 357 aaPredicted RBP22.03■■□□□ 1.12
UBR2-201ENST00000372899 TTBK1Q5TCY1 1321 aaPredicted RBP21.95■■□□□ 1.1
UBR2-201ENST00000372899 RANGAP1P46060 587 aaPredicted RBP21.85■■□□□ 1.09
UBR2-201ENST00000372899 MYT1LQ9UL68 1186 aa21.68■■□□□ 1.06
UBR2-201ENST00000372899 NEFLP07196 543 aa21.57■■□□□ 1.04
UBR2-201ENST00000372899 CENPBP07199 599 aaPredicted RBP21.54■■□□□ 1.04
UBR2-201ENST00000372899 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
UBR2-201ENST00000372899 DAXXQ9UER7 740 aaPredicted RBP21.45■■□□□ 1.02
UBR2-201ENST00000372899 NISCHQ9Y2I1 1504 aa21.42■■□□□ 1.02
UBR2-201ENST00000372899 CHIC1Q5VXU3 224 aa21.29■■□□□ 1
UBR2-201ENST00000372899 UBTFP17480 764 aaKnown RBP21.27■■□□□ 1
UBR2-201ENST00000372899 MYT1Q01538 1121 aa21.23■□□□□ 0.99
UBR2-201ENST00000372899 SLC4A1APQ9BWU0 796 aaKnown RBP21.21■□□□□ 0.99
UBR2-201ENST00000372899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.19■□□□□ 0.98
UBR2-201ENST00000372899 HNRNPUL2Q1KMD3 747 aaKnown RBP21.19■□□□□ 0.98
UBR2-201ENST00000372899 POLR3GLQ9BT43 218 aa21.19■□□□□ 0.98
UBR2-201ENST00000372899 ZEB1P37275 1124 aaPredicted RBP21.15■□□□□ 0.98
UBR2-201ENST00000372899 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
UBR2-201ENST00000372899 YTHDC1Q96MU7 727 aaKnown RBP21.06■□□□□ 0.96
UBR2-201ENST00000372899 CNGB1Q14028 1251 aaPredicted RBP20.84■□□□□ 0.93
UBR2-201ENST00000372899 ZNF316A6NFI3 1004 aaPredicted RBP20.83■□□□□ 0.92
UBR2-201ENST00000372899 CLSPNQ9HAW4 1339 aa20.82■□□□□ 0.92
UBR2-201ENST00000372899 ITGAEP38570 1179 aa20.76■□□□□ 0.91
UBR2-201ENST00000372899 SLC24A1O60721 1099 aa20.69■□□□□ 0.9
UBR2-201ENST00000372899 ZBTB47Q9UFB7 747 aaPredicted RBP20.65■□□□□ 0.9
UBR2-201ENST00000372899 PPARGC1BQ86YN6 1023 aaKnown RBP20.54■□□□□ 0.88
UBR2-201ENST00000372899 BCANQ96GW7 911 aa20.52■□□□□ 0.87
UBR2-201ENST00000372899 RTL5Q5HYW3 569 aaPredicted RBP20.5■□□□□ 0.87
UBR2-201ENST00000372899 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
UBR2-201ENST00000372899 NEFMP07197 916 aa20.32■□□□□ 0.84
UBR2-201ENST00000372899 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
UBR2-201ENST00000372899 CANXP27824 592 aaKnown RBP20.21■□□□□ 0.83
UBR2-201ENST00000372899 FAM50AQ14320 339 aaKnown RBP20.18■□□□□ 0.82
UBR2-201ENST00000372899 ESF1Q9H501 851 aaKnown RBP20.13■□□□□ 0.81
UBR2-201ENST00000372899 FBLN2P98095 1184 aa20.08■□□□□ 0.8
UBR2-201ENST00000372899 TRIM26Q12899 539 aaPredicted RBP20.07■□□□□ 0.8
UBR2-201ENST00000372899 ZNF326Q5BKZ1 582 aaKnown RBP20.06■□□□□ 0.8
UBR2-201ENST00000372899 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
UBR2-201ENST00000372899 NEUROD1Q13562 356 aa19.93■□□□□ 0.78
UBR2-201ENST00000372899 STAG3Q9UJ98 1225 aa19.92■□□□□ 0.78
UBR2-201ENST00000372899 CDK11BP21127 795 aaKnown RBP19.89■□□□□ 0.78
UBR2-201ENST00000372899 CDK11AQ9UQ88 783 aaPredicted RBP19.89■□□□□ 0.78
UBR2-201ENST00000372899 ANP32BQ92688 251 aaKnown RBP19.85■□□□□ 0.77
UBR2-201ENST00000372899 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.76
UBR2-201ENST00000372899 A0A0G2JS52 829 aa19.83■□□□□ 0.76
UBR2-201ENST00000372899 ANP32CO43423 234 aa19.81■□□□□ 0.76
UBR2-201ENST00000372899 HSP90AA1P07900 732 aaKnown RBP19.79■□□□□ 0.76
UBR2-201ENST00000372899 HRCP23327 699 aa19.77■□□□□ 0.75
UBR2-201ENST00000372899 CHGAP10645 457 aaKnown RBP19.67■□□□□ 0.74
UBR2-201ENST00000372899 NPM2Q86SE8 214 aaKnown RBP19.67■□□□□ 0.74
UBR2-201ENST00000372899 DIEXFQ68CQ4 756 aaKnown RBP19.64■□□□□ 0.73
UBR2-201ENST00000372899 NPM1P06748 294 aaKnown RBP eCLIP19.63■□□□□ 0.73
UBR2-201ENST00000372899 ANP32AP39687 249 aaKnown RBP19.59■□□□□ 0.73
UBR2-201ENST00000372899 ZNF777Q9ULD5 760 aaPredicted RBP19.59■□□□□ 0.73
UBR2-201ENST00000372899 UPF2Q9HAU5 1272 aaKnown RBP19.58■□□□□ 0.72
UBR2-201ENST00000372899 ARID3CA6NKF2 412 aa19.55■□□□□ 0.72
UBR2-201ENST00000372899 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
UBR2-201ENST00000372899 PABPN1Q86U42 306 aaKnown RBP eCLIP19.48■□□□□ 0.71
UBR2-201ENST00000372899 ZBTB7CA1YPR0 619 aa19.46■□□□□ 0.71
UBR2-201ENST00000372899 TULP1O00294 542 aaPredicted RBP19.45■□□□□ 0.7
UBR2-201ENST00000372899 HAP1P54257 671 aaPredicted RBP19.44■□□□□ 0.7
UBR2-201ENST00000372899 PLEKHG5O94827 1062 aa19.41■□□□□ 0.7
UBR2-201ENST00000372899 C14orf37Q86TY3 774 aa19.4■□□□□ 0.7
UBR2-201ENST00000372899 P3H3Q8IVL6 736 aa19.35■□□□□ 0.69
UBR2-201ENST00000372899 MYH16Q9H6N6 1097 aa19.34■□□□□ 0.69
UBR2-201ENST00000372899 NPHP1O15259 732 aa19.32■□□□□ 0.68
UBR2-201ENST00000372899 ARXQ96QS3 562 aa19.31■□□□□ 0.68
UBR2-201ENST00000372899 EIF5BO60841 1220 aaKnown RBP19.31■□□□□ 0.68
UBR2-201ENST00000372899 ABCC9O60706 1549 aa19.27■□□□□ 0.68
UBR2-201ENST00000372899 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.27■□□□□ 0.68
UBR2-201ENST00000372899 GLIPR1L2Q4G1C9 344 aa19.25■□□□□ 0.67
UBR2-201ENST00000372899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.23■□□□□ 0.671e-6■■■□□ 15.1
UBR2-201ENST00000372899 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
UBR2-201ENST00000372899 WDR43Q15061 677 aaKnown RBP eCLIP19.21■□□□□ 0.66
UBR2-201ENST00000372899 PPP1R15AO75807 674 aaPredicted RBP19.18■□□□□ 0.66
UBR2-201ENST00000372899 ZRSR1Q15695 479 aaKnown RBP19.17■□□□□ 0.66
UBR2-201ENST00000372899 NCLP19338 710 aaKnown RBP19.16■□□□□ 0.66
UBR2-201ENST00000372899 SALL2Q9Y467 1007 aaPredicted RBP19.16■□□□□ 0.66
UBR2-201ENST00000372899 ARID4BQ4LE39 1312 aaPredicted RBP19.13■□□□□ 0.65
UBR2-201ENST00000372899 TONSLQ96HA7 1378 aa19.08■□□□□ 0.64
UBR2-201ENST00000372899 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
UBR2-201ENST00000372899 GTF3C3Q9Y5Q9 886 aa19.06■□□□□ 0.64
UBR2-201ENST00000372899 TMC1Q8TDI8 760 aa19.06■□□□□ 0.64
UBR2-201ENST00000372899 CLSTN1O94985 981 aa19.04■□□□□ 0.64
UBR2-201ENST00000372899 FAM9BQ8IZU0 186 aa19.03■□□□□ 0.64
UBR2-201ENST00000372899 GOLGA2Q08379 1002 aa19.01■□□□□ 0.63
UBR2-201ENST00000372899 CASC1Q6TDU7 716 aa19■□□□□ 0.63
UBR2-201ENST00000372899 KDM2AQ9Y2K7 1162 aa18.97■□□□□ 0.63
UBR2-201ENST00000372899 LMOD2Q6P5Q4 547 aa18.95■□□□□ 0.62
UBR2-201ENST00000372899 TRIM44Q96DX7 344 aaPredicted RBP18.95■□□□□ 0.62
UBR2-201ENST00000372899 HNRNPUQ00839 825 aaKnown RBP eCLIP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms