RNA–Protein interactions for RNA: ENST00000408041.5

SLC5A6-203, Transcript of solute carrier family 5 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC5A6, Length 2,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-203ENST00000408041 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
SLC5A6-203ENST00000408041 CCDC180Q9P1Z9 1646 aa28.55■■■□□ 2.16
SLC5A6-203ENST00000408041 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
SLC5A6-203ENST00000408041 ZCCHC6Q5VYS8 1495 aaKnown RBP28.43■■■□□ 2.14
SLC5A6-203ENST00000408041 SUPT5HO00267 1087 aaKnown RBP28.05■■■□□ 2.08
SLC5A6-203ENST00000408041 DCAF1Q9Y4B6 1507 aa27.7■■■□□ 2.02
SLC5A6-203ENST00000408041 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
SLC5A6-203ENST00000408041 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
SLC5A6-203ENST00000408041 MYO15BQ96JP2 1530 aa27.19■■□□□ 1.94
SLC5A6-203ENST00000408041 HRCP23327 699 aa26.83■■□□□ 1.89
SLC5A6-203ENST00000408041 ABCC9O60706 1549 aa26.81■■□□□ 1.88
SLC5A6-203ENST00000408041 PCGF6Q9BYE7 350 aa26.62■■□□□ 1.85
SLC5A6-203ENST00000408041 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
SLC5A6-203ENST00000408041 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
SLC5A6-203ENST00000408041 LOC105371045A0A1W2PR82 267 aa26.5■■□□□ 1.83
SLC5A6-203ENST00000408041 NACADO15069 1562 aa26.4■■□□□ 1.82
SLC5A6-203ENST00000408041 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
SLC5A6-203ENST00000408041 TRIM26Q12899 539 aaPredicted RBP26.27■■□□□ 1.8
SLC5A6-203ENST00000408041 TRIM41Q8WV44 630 aa26.25■■□□□ 1.79
SLC5A6-203ENST00000408041 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
SLC5A6-203ENST00000408041 MROH2BQ7Z745 1585 aa26.02■■□□□ 1.76
SLC5A6-203ENST00000408041 PPARGC1BQ86YN6 1023 aaKnown RBP26.01■■□□□ 1.75
SLC5A6-203ENST00000408041 ZEB1P37275 1124 aaPredicted RBP25.89■■□□□ 1.74
SLC5A6-203ENST00000408041 FAM9AQ8IZU1 332 aaPredicted RBP25.86■■□□□ 1.73
SLC5A6-203ENST00000408041 WIZO95785 1651 aa25.84■■□□□ 1.73
SLC5A6-203ENST00000408041 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
SLC5A6-203ENST00000408041 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
SLC5A6-203ENST00000408041 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.69
SLC5A6-203ENST00000408041 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
SLC5A6-203ENST00000408041 EHMT2Q96KQ7 1210 aa25.49■■□□□ 1.67
SLC5A6-203ENST00000408041 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
SLC5A6-203ENST00000408041 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
SLC5A6-203ENST00000408041 UNC13AQ9UPW8 1703 aa25.32■■□□□ 1.64
SLC5A6-203ENST00000408041 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
SLC5A6-203ENST00000408041 EEA1Q15075 1411 aa25.27■■□□□ 1.64
SLC5A6-203ENST00000408041 WRNQ14191 1432 aaPredicted RBP eCLIP25.25■■□□□ 1.63
SLC5A6-203ENST00000408041 TNIKQ9UKE5 1360 aa25.19■■□□□ 1.62
SLC5A6-203ENST00000408041 CSRNP3Q8WYN3 585 aa25.13■■□□□ 1.61
SLC5A6-203ENST00000408041 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
SLC5A6-203ENST00000408041 SOGA1O94964 1423 aa25.12■■□□□ 1.61
SLC5A6-203ENST00000408041 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
SLC5A6-203ENST00000408041 BICRAQ9NZM4 1560 aa25.08■■□□□ 1.61
SLC5A6-203ENST00000408041 CCER1Q8TC90 406 aaPredicted RBP25.06■■□□□ 1.6
SLC5A6-203ENST00000408041 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
SLC5A6-203ENST00000408041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25■■□□□ 1.59
SLC5A6-203ENST00000408041 GOLGA3Q08378 1498 aa24.98■■□□□ 1.59
SLC5A6-203ENST00000408041 UBTFP17480 764 aaKnown RBP24.97■■□□□ 1.59
SLC5A6-203ENST00000408041 RUSC2Q8N2Y8 1516 aa24.93■■□□□ 1.58
SLC5A6-203ENST00000408041 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
SLC5A6-203ENST00000408041 CEP164Q9UPV0 1460 aa24.85■■□□□ 1.57
SLC5A6-203ENST00000408041 KIF21BO75037 1637 aa24.8■■□□□ 1.56
SLC5A6-203ENST00000408041 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
SLC5A6-203ENST00000408041 SYNJ1O43426 1573 aa24.77■■□□□ 1.56
SLC5A6-203ENST00000408041 TTBK1Q5TCY1 1321 aaPredicted RBP24.73■■□□□ 1.55
SLC5A6-203ENST00000408041 CLIP1P30622 1438 aa24.67■■□□□ 1.54
SLC5A6-203ENST00000408041 SCAF1Q9H7N4 1312 aaKnown RBP24.66■■□□□ 1.54
SLC5A6-203ENST00000408041 DIEXFQ68CQ4 756 aaKnown RBP24.64■■□□□ 1.54
SLC5A6-203ENST00000408041 PELP1Q8IZL8 1130 aaKnown RBP24.62■■□□□ 1.53
SLC5A6-203ENST00000408041 VPS8Q8N3P4 1428 aa24.61■■□□□ 1.53
SLC5A6-203ENST00000408041 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
SLC5A6-203ENST00000408041 APLP2Q06481 763 aa24.55■■□□□ 1.52
SLC5A6-203ENST00000408041 ACIN1Q9UKV3 1341 aaKnown RBP24.53■■□□□ 1.52
SLC5A6-203ENST00000408041 RAPGEF2Q9Y4G8 1499 aa24.52■■□□□ 1.52
SLC5A6-203ENST00000408041 ZNF316A6NFI3 1004 aaPredicted RBP24.49■■□□□ 1.51
SLC5A6-203ENST00000408041 CENPBP07199 599 aaPredicted RBP24.48■■□□□ 1.51
SLC5A6-203ENST00000408041 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
SLC5A6-203ENST00000408041 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
SLC5A6-203ENST00000408041 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
SLC5A6-203ENST00000408041 ERICH3Q5RHP9 1530 aa24.42■■□□□ 1.5
SLC5A6-203ENST00000408041 HMGXB3Q12766 1538 aa24.41■■□□□ 1.5
SLC5A6-203ENST00000408041 HNRNPUL2Q1KMD3 747 aaKnown RBP24.41■■□□□ 1.5
SLC5A6-203ENST00000408041 NEUROD1Q13562 356 aa24.38■■□□□ 1.49
SLC5A6-203ENST00000408041 PRXQ9BXM0 1461 aa24.37■■□□□ 1.49
SLC5A6-203ENST00000408041 KIF27Q86VH2 1401 aa24.26■■□□□ 1.47
SLC5A6-203ENST00000408041 CLSPNQ9HAW4 1339 aa24.25■■□□□ 1.47
SLC5A6-203ENST00000408041 RANGAP1P46060 587 aaPredicted RBP24.23■■□□□ 1.47
SLC5A6-203ENST00000408041 CUX1P39880 1505 aa24.23■■□□□ 1.47
SLC5A6-203ENST00000408041 CFTRP13569 1480 aa24.23■■□□□ 1.47
SLC5A6-203ENST00000408041 ARAP1Q96P48 1450 aa24.21■■□□□ 1.47
SLC5A6-203ENST00000408041 GTF3C3Q9Y5Q9 886 aa24.17■■□□□ 1.46
SLC5A6-203ENST00000408041 RRBP1Q9P2E9 1410 aaKnown RBP24.07■■□□□ 1.44
SLC5A6-203ENST00000408041 KANK4Q5T7N3 995 aaPredicted RBP24.05■■□□□ 1.44
SLC5A6-203ENST00000408041 DHX57Q6P158 1386 aaKnown RBP24.04■■□□□ 1.44
SLC5A6-203ENST00000408041 MIER1Q8N108 512 aa24.03■■□□□ 1.44
SLC5A6-203ENST00000408041 ARHGAP35Q9NRY4 1499 aa24■■□□□ 1.43
SLC5A6-203ENST00000408041 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
SLC5A6-203ENST00000408041 CUX2O14529 1486 aa23.97■■□□□ 1.43
SLC5A6-203ENST00000408041 IGF1RP08069 1367 aa23.94■■□□□ 1.42
SLC5A6-203ENST00000408041 CCNB3Q8WWL7 1395 aa23.94■■□□□ 1.42
SLC5A6-203ENST00000408041 CADPSQ9ULU8 1353 aa23.94■■□□□ 1.42
SLC5A6-203ENST00000408041 MAP3K1Q13233 1512 aa23.91■■□□□ 1.42
SLC5A6-203ENST00000408041 YTHDC1Q96MU7 727 aaKnown RBP23.9■■□□□ 1.42
SLC5A6-203ENST00000408041 CARMIL1Q5VZK9 1371 aa23.86■■□□□ 1.41
SLC5A6-203ENST00000408041 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
SLC5A6-203ENST00000408041 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
SLC5A6-203ENST00000408041 TIAM1Q13009 1591 aa23.78■■□□□ 1.4
SLC5A6-203ENST00000408041 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
SLC5A6-203ENST00000408041 LRRC9Q6ZRR7 1453 aa23.71■■□□□ 1.39
SLC5A6-203ENST00000408041 RAB3GAP2Q9H2M9 1393 aa23.68■■□□□ 1.38
SLC5A6-203ENST00000408041 ITGAEP38570 1179 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms