RNA–Protein interactions for RNA: ENST00000442731.1

SLC5A6-210, Transcript of solute carrier family 5 member 6, human

TSL 4

Gene SLC5A6, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC5A6-210	ENST00000442731	NISCH	Q9Y2I1	1504 aa		34.15	■■■■□ 3.06
SLC5A6-210	ENST00000442731	CCDC180	Q9P1Z9	1646 aa		30.54	■■■□□ 2.48
SLC5A6-210	ENST00000442731	ABCC9	O60706	1549 aa		30.09	■■■□□ 2.41
SLC5A6-210	ENST00000442731	RB1CC1	Q8TDY2	1594 aa		28.87	■■■□□ 2.21
SLC5A6-210	ENST00000442731	NACAD	O15069	1562 aa		28.77	■■■□□ 2.2
SLC5A6-210	ENST00000442731	DCAF8L2	P0C7V8	631 aa		28.59	■■■□□ 2.17
SLC5A6-210	ENST00000442731	MYO15B	Q96JP2	1530 aa		28.53	■■■□□ 2.16
SLC5A6-210	ENST00000442731	ZCCHC6	Q5VYS8	1495 aa	Known RBP	28.38	■■■□□ 2.13
SLC5A6-210	ENST00000442731	DCAF1	Q9Y4B6	1507 aa		28.28	■■■□□ 2.12
SLC5A6-210	ENST00000442731	UNC13A	Q9UPW8	1703 aa		28.23	■■■□□ 2.11
SLC5A6-210	ENST00000442731	PABPN1	Q86U42	306 aa	Known RBP eCLIP	28.05	■■■□□ 2.08
SLC5A6-210	ENST00000442731	BICRA	Q9NZM4	1560 aa		28	■■■□□ 2.07
SLC5A6-210	ENST00000442731	DNAJC5B	Q9UF47	199 aa		27.91	■■■□□ 2.06
SLC5A6-210	ENST00000442731	SCRIB	Q14160	1630 aa		27.76	■■■□□ 2.03
SLC5A6-210	ENST00000442731	SHROOM4	Q9ULL8	1493 aa		27.71	■■■□□ 2.03
SLC5A6-210	ENST00000442731	EIF4G1	Q04637	1599 aa	Known RBP	27.27	■■□□□ 1.96
SLC5A6-210	ENST00000442731	CC2D2A	Q9P2K1	1620 aa		27.24	■■□□□ 1.95
SLC5A6-210	ENST00000442731	CECR2	Q9BXF3	1484 aa		27.09	■■□□□ 1.93
SLC5A6-210	ENST00000442731	SMARCA4	P51532	1647 aa		26.57	■■□□□ 1.84
SLC5A6-210	ENST00000442731	NCAPD3	P42695	1498 aa		26.55	■■□□□ 1.84
SLC5A6-210	ENST00000442731	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	26.5	■■□□□ 1.83
SLC5A6-210	ENST00000442731	ATAD2B	Q9ULI0	1458 aa		26.49	■■□□□ 1.83
SLC5A6-210	ENST00000442731	SMARCA2	P51531	1590 aa		26.46	■■□□□ 1.83
SLC5A6-210	ENST00000442731	HMGXB3	Q12766	1538 aa		26.39	■■□□□ 1.81
SLC5A6-210	ENST00000442731	PEG3	Q9GZU2	1588 aa		26.34	■■□□□ 1.81
SLC5A6-210	ENST00000442731	MROH2B	Q7Z745	1585 aa		26.3	■■□□□ 1.8
SLC5A6-210	ENST00000442731	BAZ1B	Q9UIG0	1483 aa	Known RBP	26.24	■■□□□ 1.79
SLC5A6-210	ENST00000442731	WIZ	O95785	1651 aa		26.01	■■□□□ 1.75
SLC5A6-210	ENST00000442731	ERCC6	Q03468	1493 aa		25.97	■■□□□ 1.75
SLC5A6-210	ENST00000442731	NES	P48681	1621 aa		25.96	■■□□□ 1.75
SLC5A6-210	ENST00000442731	LAMC3	Q9Y6N6	1575 aa		25.9	■■□□□ 1.74
SLC5A6-210	ENST00000442731	RSF1	Q96T23	1441 aa	Predicted RBP	25.89	■■□□□ 1.74
SLC5A6-210	ENST00000442731	CUX2	O14529	1486 aa		25.85	■■□□□ 1.73
SLC5A6-210	ENST00000442731	CADPS	Q9ULU8	1353 aa		25.74	■■□□□ 1.71
SLC5A6-210	ENST00000442731	TOP2A	P11388	1531 aa	Known RBP	25.72	■■□□□ 1.71
SLC5A6-210	ENST00000442731	PDS5B	Q9NTI5	1447 aa		25.71	■■□□□ 1.71
SLC5A6-210	ENST00000442731	KIF21A	Q7Z4S6	1674 aa		25.68	■■□□□ 1.7
SLC5A6-210	ENST00000442731	THOC2	Q8NI27	1593 aa	Known RBP	25.66	■■□□□ 1.7
SLC5A6-210	ENST00000442731	CFTR	P13569	1480 aa		25.53	■■□□□ 1.68
SLC5A6-210	ENST00000442731	MRC2	Q9UBG0	1479 aa		25.47	■■□□□ 1.67
SLC5A6-210	ENST00000442731	FANCD2	Q9BXW9	1451 aa		25.43	■■□□□ 1.66
SLC5A6-210	ENST00000442731	CEP164	Q9UPV0	1460 aa		25.43	■■□□□ 1.66
SLC5A6-210	ENST00000442731	DNAJC5	Q9H3Z4	198 aa		25.41	■■□□□ 1.66
SLC5A6-210	ENST00000442731	CCDC88B	A6NC98	1476 aa		25.4	■■□□□ 1.66
SLC5A6-210	ENST00000442731	WDR62	O43379	1518 aa		25.4	■■□□□ 1.66
SLC5A6-210	ENST00000442731	PRDM2	Q13029	1718 aa		25.35	■■□□□ 1.65
SLC5A6-210	ENST00000442731	URB2	Q14146	1524 aa	Known RBP	25.2	■■□□□ 1.62
SLC5A6-210	ENST00000442731	ABCC8	Q09428	1581 aa		25.01	■■□□□ 1.59
SLC5A6-210	ENST00000442731	TOPBP1	Q92547	1522 aa		25	■■□□□ 1.59
SLC5A6-210	ENST00000442731	SUPT5H	O00267	1087 aa	Known RBP	24.95	■■□□□ 1.58
SLC5A6-210	ENST00000442731	DNMBP	Q6XZF7	1577 aa		24.95	■■□□□ 1.58
SLC5A6-210	ENST00000442731	IFT140	Q96RY7	1462 aa		24.92	■■□□□ 1.58
SLC5A6-210	ENST00000442731	ZNF608	Q9ULD9	1512 aa	Predicted RBP	24.81	■■□□□ 1.56
SLC5A6-210	ENST00000442731	TARBP1	Q13395	1621 aa	Known RBP	24.76	■■□□□ 1.55
SLC5A6-210	ENST00000442731	POLA1	P09884	1462 aa	Predicted RBP	24.76	■■□□□ 1.55
SLC5A6-210	ENST00000442731	EIF4G3	O43432	1585 aa	Known RBP	24.71	■■□□□ 1.55
SLC5A6-210	ENST00000442731	OSCAR	Q8IYS5	282 aa		24.71	■■□□□ 1.55
SLC5A6-210	ENST00000442731	CUX1	P39880	1505 aa		24.69	■■□□□ 1.54
SLC5A6-210	ENST00000442731	SOGA1	O94964	1423 aa		24.66	■■□□□ 1.54
SLC5A6-210	ENST00000442731	FGD5	Q6ZNL6	1462 aa		24.65	■■□□□ 1.54
SLC5A6-210	ENST00000442731	AQR	O60306	1485 aa	Known RBP eCLIP	24.64	■■□□□ 1.53	3e-6	■■■■□ 19.7
SLC5A6-210	ENST00000442731	RAD54L2	Q9Y4B4	1467 aa		24.64	■■□□□ 1.53
SLC5A6-210	ENST00000442731	WDR97	A6NE52	1622 aa		24.58	■■□□□ 1.53
SLC5A6-210	ENST00000442731	TDRD9	Q8NDG6	1382 aa	Known RBP	24.54	■■□□□ 1.52
SLC5A6-210	ENST00000442731	CHD1	O14646	1710 aa		24.48	■■□□□ 1.51
SLC5A6-210	ENST00000442731	BIVM-ERCC5	R4GMW8	1640 aa		24.43	■■□□□ 1.5
SLC5A6-210	ENST00000442731	ABCA10	Q8WWZ4	1543 aa		24.42	■■□□□ 1.5
SLC5A6-210	ENST00000442731	WRN	Q14191	1432 aa	Predicted RBP eCLIP	24.42	■■□□□ 1.5
SLC5A6-210	ENST00000442731	TOP2B	Q02880	1626 aa		24.42	■■□□□ 1.5
SLC5A6-210	ENST00000442731	GRIN2B	Q13224	1484 aa		24.41	■■□□□ 1.5
SLC5A6-210	ENST00000442731	SNAPC4	Q5SXM2	1469 aa		24.39	■■□□□ 1.5
SLC5A6-210	ENST00000442731	MAGI1	Q96QZ7	1491 aa	Predicted RBP	24.38	■■□□□ 1.49
SLC5A6-210	ENST00000442731	FBLN2	P98095	1184 aa		24.37	■■□□□ 1.49
SLC5A6-210	ENST00000442731	TRIM41	Q8WV44	630 aa		24.37	■■□□□ 1.49
SLC5A6-210	ENST00000442731	GAPVD1	Q14C86	1478 aa		24.37	■■□□□ 1.49
SLC5A6-210	ENST00000442731	SYNJ1	O43426	1573 aa		24.37	■■□□□ 1.49
SLC5A6-210	ENST00000442731	PBRM1	Q86U86	1689 aa		24.35	■■□□□ 1.49
SLC5A6-210	ENST00000442731	RIMBP3C	A6NJZ7	1639 aa		24.35	■■□□□ 1.49
SLC5A6-210	ENST00000442731	RIMBP3B	A6NNM3	1639 aa		24.35	■■□□□ 1.49
SLC5A6-210	ENST00000442731	ABCA5	Q8WWZ7	1642 aa		24.35	■■□□□ 1.49
SLC5A6-210	ENST00000442731	RIMBP3	Q9UFD9	1639 aa		24.35	■■□□□ 1.49
SLC5A6-210	ENST00000442731	ARHGEF11	O15085	1522 aa		24.3	■■□□□ 1.48
SLC5A6-210	ENST00000442731	CHMP7	Q8WUX9	453 aa	Predicted RBP	24.29	■■□□□ 1.48
SLC5A6-210	ENST00000442731	SYNJ2	O15056	1496 aa		24.29	■■□□□ 1.48
SLC5A6-210	ENST00000442731	CLASP1	Q7Z460	1538 aa		24.2	■■□□□ 1.47
SLC5A6-210	ENST00000442731	ERICH3	Q5RHP9	1530 aa		24.13	■■□□□ 1.45
SLC5A6-210	ENST00000442731	ADAMTS12	P58397	1594 aa		24.12	■■□□□ 1.45
SLC5A6-210	ENST00000442731	GRIN2A	Q12879	1464 aa		24.09	■■□□□ 1.45
SLC5A6-210	ENST00000442731	FHAD1	B1AJZ9	1412 aa		24.08	■■□□□ 1.44
SLC5A6-210	ENST00000442731	ARAP1	Q96P48	1450 aa		24.07	■■□□□ 1.44
SLC5A6-210	ENST00000442731	CYB5RL	Q6IPT4	315 aa		24.07	■■□□□ 1.44
SLC5A6-210	ENST00000442731	NUP160	Q12769	1436 aa		24.01	■■□□□ 1.43
SLC5A6-210	ENST00000442731	CEP170	Q5SW79	1584 aa		23.99	■■□□□ 1.43
SLC5A6-210	ENST00000442731	KIF27	Q86VH2	1401 aa		23.93	■■□□□ 1.42
SLC5A6-210	ENST00000442731	SHROOM2	Q13796	1616 aa		23.88	■■□□□ 1.41
SLC5A6-210	ENST00000442731	IGF1R	P08069	1367 aa		23.88	■■□□□ 1.41
SLC5A6-210	ENST00000442731	CUL7	Q14999	1698 aa		23.86	■■□□□ 1.41
SLC5A6-210	ENST00000442731	ERCC6L2	Q5T890	1561 aa		23.82	■■□□□ 1.4
SLC5A6-210	ENST00000442731	RUSC2	Q8N2Y8	1516 aa		23.78	■■□□□ 1.4
SLC5A6-210	ENST00000442731	JPH4	Q96JJ6	628 aa		23.75	■■□□□ 1.39

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms