Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KRT78Q8N1N4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
KRT78Q8N1N4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
KRT78Q8N1N4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
KRT78Q8N1N4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KRT78Q8N1N4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.47■■□□□ 1.35
KRT78Q8N1N4 AL157400.5-201ENST00000507624 621 ntBASIC23.47■■□□□ 1.35
KRT78Q8N1N4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
KRT78Q8N1N4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
KRT78Q8N1N4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
KRT78Q8N1N4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
KRT78Q8N1N4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
KRT78Q8N1N4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
KRT78Q8N1N4 AC092296.2-201ENST00000589470 999 ntBASIC23.46■■□□□ 1.35
KRT78Q8N1N4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.46■■□□□ 1.35
KRT78Q8N1N4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.45■■□□□ 1.35
KRT78Q8N1N4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.45■■□□□ 1.35
KRT78Q8N1N4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.45■■□□□ 1.34
KRT78Q8N1N4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.45■■□□□ 1.34
KRT78Q8N1N4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
KRT78Q8N1N4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
KRT78Q8N1N4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
KRT78Q8N1N4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.44■■□□□ 1.34
KRT78Q8N1N4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.44■■□□□ 1.34
KRT78Q8N1N4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
KRT78Q8N1N4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
KRT78Q8N1N4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
KRT78Q8N1N4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
KRT78Q8N1N4 AC091060.1-201ENST00000623524 1766 ntBASIC23.43■■□□□ 1.34
KRT78Q8N1N4 ECEL1P2-201ENST00000461596 1295 ntBASIC23.43■■□□□ 1.34
KRT78Q8N1N4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
KRT78Q8N1N4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KRT78Q8N1N4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KRT78Q8N1N4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
KRT78Q8N1N4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
KRT78Q8N1N4 GPX1-201ENST00000419349 1106 ntBASIC23.42■■□□□ 1.34
KRT78Q8N1N4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.42■■□□□ 1.34
KRT78Q8N1N4 AC092803.2-201ENST00000564287 1899 ntBASIC23.42■■□□□ 1.34
KRT78Q8N1N4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KRT78Q8N1N4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 AC025884.2-201ENST00000553429 711 ntBASIC23.41■■□□□ 1.34
KRT78Q8N1N4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 SMPD5-203ENST00000639008 1464 ntBASIC23.41■■□□□ 1.34
KRT78Q8N1N4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
KRT78Q8N1N4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.4■■□□□ 1.34
KRT78Q8N1N4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
KRT78Q8N1N4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KRT78Q8N1N4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.39■■□□□ 1.33
KRT78Q8N1N4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
KRT78Q8N1N4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.39■■□□□ 1.33
KRT78Q8N1N4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
KRT78Q8N1N4 AC145676.1-201ENST00000514988 2004 ntBASIC23.38■■□□□ 1.33
KRT78Q8N1N4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.38■■□□□ 1.33
KRT78Q8N1N4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
KRT78Q8N1N4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
KRT78Q8N1N4 MIR3960-201ENST00000583311 91 ntBASIC23.38■■□□□ 1.33
KRT78Q8N1N4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KRT78Q8N1N4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.37■■□□□ 1.33
KRT78Q8N1N4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KRT78Q8N1N4 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.37■■□□□ 1.33
KRT78Q8N1N4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.37■■□□□ 1.33
KRT78Q8N1N4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KRT78Q8N1N4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
KRT78Q8N1N4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
KRT78Q8N1N4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KRT78Q8N1N4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KRT78Q8N1N4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
KRT78Q8N1N4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
KRT78Q8N1N4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KRT78Q8N1N4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
KRT78Q8N1N4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KRT78Q8N1N4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KRT78Q8N1N4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KRT78Q8N1N4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KRT78Q8N1N4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KRT78Q8N1N4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.33■■□□□ 1.33
KRT78Q8N1N4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.33■■□□□ 1.33
KRT78Q8N1N4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
KRT78Q8N1N4 DUSP8P4-201ENST00000399538 1761 ntBASIC23.32■■□□□ 1.32
KRT78Q8N1N4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.32■■□□□ 1.32
KRT78Q8N1N4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.32■■□□□ 1.32
KRT78Q8N1N4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.32■■□□□ 1.32
KRT78Q8N1N4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KRT78Q8N1N4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.32■■□□□ 1.32
KRT78Q8N1N4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.32■■□□□ 1.32
KRT78Q8N1N4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.31■■□□□ 1.32
KRT78Q8N1N4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
KRT78Q8N1N4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KRT78Q8N1N4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
KRT78Q8N1N4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms