RNA–Protein interactions for RNA: ENST00000454109.1

C2CD4D-201, Transcript of C2 calcium dependent domain containing 4D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2CD4D, Length 1,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4D-201ENST00000454109 NISCHQ9Y2I1 1504 aa55.37■■■■■ 6.45
C2CD4D-201ENST00000454109 CCDC180Q9P1Z9 1646 aa48.31■■■■■ 5.32
C2CD4D-201ENST00000454109 ZCCHC6Q5VYS8 1495 aaKnown RBP46.54■■■■■ 5.04
C2CD4D-201ENST00000454109 DCAF1Q9Y4B6 1507 aa45.79■■■■■ 4.92
C2CD4D-201ENST00000454109 ABCC9O60706 1549 aa45.6■■■■■ 4.89
C2CD4D-201ENST00000454109 DCAF8L2P0C7V8 631 aa45.5■■■■■ 4.88
C2CD4D-201ENST00000454109 MYO15BQ96JP2 1530 aa45.23■■■■■ 4.83
C2CD4D-201ENST00000454109 SHROOM4Q9ULL8 1493 aa45.09■■■■■ 4.81
C2CD4D-201ENST00000454109 NACADO15069 1562 aa44.93■■■■■ 4.78
C2CD4D-201ENST00000454109 RB1CC1Q8TDY2 1594 aa44.53■■■■■ 4.72
C2CD4D-201ENST00000454109 SCRIBQ14160 1630 aa44.41■■■■■ 4.7
C2CD4D-201ENST00000454109 UNC13AQ9UPW8 1703 aa43.79■■■■■ 4.6
C2CD4D-201ENST00000454109 SUPT5HO00267 1087 aaKnown RBP43.31■■■■■ 4.52
C2CD4D-201ENST00000454109 BICRAQ9NZM4 1560 aa43.31■■■■■ 4.52
C2CD4D-201ENST00000454109 CECR2Q9BXF3 1484 aa43.04■■■■■ 4.48
C2CD4D-201ENST00000454109 PABPN1Q86U42 306 aaKnown RBP eCLIP42.96■■■■■ 4.47
C2CD4D-201ENST00000454109 RSF1Q96T23 1441 aaPredicted RBP42.95■■■■■ 4.47
C2CD4D-201ENST00000454109 MROH2BQ7Z745 1585 aa42.8■■■■■ 4.44
C2CD4D-201ENST00000454109 BAZ1AQ9NRL2 1556 aaPredicted RBP42.72■■■■■ 4.43
C2CD4D-201ENST00000454109 SMARCA4P51532 1647 aa42.59■■■■■ 4.41
C2CD4D-201ENST00000454109 WIZO95785 1651 aa42.46■■■■■ 4.39
C2CD4D-201ENST00000454109 PEG3Q9GZU2 1588 aa42.08■■■■■ 4.33
C2CD4D-201ENST00000454109 TOP2AP11388 1531 aaKnown RBP42■■■■■ 4.31
C2CD4D-201ENST00000454109 EIF4G1Q04637 1599 aaKnown RBP41.94■■■■■ 4.3
C2CD4D-201ENST00000454109 ATAD2BQ9ULI0 1458 aa41.84■■■■■ 4.29
C2CD4D-201ENST00000454109 SMARCA2P51531 1590 aa41.8■■■■■ 4.28
C2CD4D-201ENST00000454109 BAZ1BQ9UIG0 1483 aaKnown RBP41.58■■■■■ 4.25
C2CD4D-201ENST00000454109 CCDC88BA6NC98 1476 aa41.55■■■■■ 4.24
C2CD4D-201ENST00000454109 CHIC1Q5VXU3 224 aa41.54■■■■■ 4.24
C2CD4D-201ENST00000454109 NCAPD3P42695 1498 aa41.47■■■■■ 4.23
C2CD4D-201ENST00000454109 HMGXB3Q12766 1538 aa41.44■■■■■ 4.23
C2CD4D-201ENST00000454109 CC2D2AQ9P2K1 1620 aa41.32■■■■■ 4.2
C2CD4D-201ENST00000454109 TRIM41Q8WV44 630 aa40.71■■■■■ 4.11
C2CD4D-201ENST00000454109 ABCC8Q09428 1581 aa40.7■■■■■ 4.11
C2CD4D-201ENST00000454109 CFTRP13569 1480 aa40.56■■■■■ 4.08
C2CD4D-201ENST00000454109 PRDM2Q13029 1718 aa40.44■■■■■ 4.06
C2CD4D-201ENST00000454109 CADPSQ9ULU8 1353 aa40.38■■■■■ 4.05
C2CD4D-201ENST00000454109 WRNQ14191 1432 aaPredicted RBP eCLIP40.37■■■■■ 4.05
C2CD4D-201ENST00000454109 SYNJ1O43426 1573 aa40.31■■■■■ 4.04
C2CD4D-201ENST00000454109 DNAJC5BQ9UF47 199 aa40.3■■■■■ 4.04
C2CD4D-201ENST00000454109 TOP2BQ02880 1626 aa40.12■■■■■ 4.01
C2CD4D-201ENST00000454109 BIVM-ERCC5R4GMW8 1640 aa40.11■■■■■ 4.01
C2CD4D-201ENST00000454109 NESP48681 1621 aa40.09■■■■■ 4.01
C2CD4D-201ENST00000454109 LAMC3Q9Y6N6 1575 aa40.06■■■■■ 4
C2CD4D-201ENST00000454109 CUX1P39880 1505 aa40.03■■■■■ 4
C2CD4D-201ENST00000454109 FAM9AQ8IZU1 332 aaPredicted RBP39.98■■■■□ 3.99
C2CD4D-201ENST00000454109 FANCD2Q9BXW9 1451 aa39.96■■■■□ 3.99
C2CD4D-201ENST00000454109 LOC105371045A0A1W2PR82 267 aa39.94■■■■□ 3.98
C2CD4D-201ENST00000454109 SOGA1O94964 1423 aa39.91■■■■□ 3.98
C2CD4D-201ENST00000454109 RUSC2Q8N2Y8 1516 aa39.8■■■■□ 3.96
C2CD4D-201ENST00000454109 EEA1Q15075 1411 aa39.77■■■■□ 3.96
C2CD4D-201ENST00000454109 CEP164Q9UPV0 1460 aa39.69■■■■□ 3.94
C2CD4D-201ENST00000454109 PDS5BQ9NTI5 1447 aa39.68■■■■□ 3.94
C2CD4D-201ENST00000454109 KIF21AQ7Z4S6 1674 aa39.65■■■■□ 3.94
C2CD4D-201ENST00000454109 DNMBPQ6XZF7 1577 aa39.63■■■■□ 3.94
C2CD4D-201ENST00000454109 TOPBP1Q92547 1522 aa39.55■■■■□ 3.92
C2CD4D-201ENST00000454109 FGD5Q6ZNL6 1462 aa39.55■■■■□ 3.92
C2CD4D-201ENST00000454109 CSRNP3Q8WYN3 585 aa39.52■■■■□ 3.92
C2CD4D-201ENST00000454109 URB2Q14146 1524 aaKnown RBP39.51■■■■□ 3.92
C2CD4D-201ENST00000454109 EHMT2Q96KQ7 1210 aa39.41■■■■□ 3.9
C2CD4D-201ENST00000454109 POLA1P09884 1462 aaPredicted RBP39.36■■■■□ 3.89
C2CD4D-201ENST00000454109 KIF21BO75037 1637 aa39.35■■■■□ 3.89
C2CD4D-201ENST00000454109 KIF27Q86VH2 1401 aa39.33■■■■□ 3.89
C2CD4D-201ENST00000454109 CUX2O14529 1486 aa39.25■■■■□ 3.87
C2CD4D-201ENST00000454109 GOLGA3Q08378 1498 aa39.25■■■■□ 3.87
C2CD4D-201ENST00000454109 MRC2Q9UBG0 1479 aa39.24■■■■□ 3.87
C2CD4D-201ENST00000454109 RAD54L2Q9Y4B4 1467 aa39.23■■■■□ 3.87
C2CD4D-201ENST00000454109 ABCA10Q8WWZ4 1543 aa39.2■■■■□ 3.87
C2CD4D-201ENST00000454109 WDR97A6NE52 1622 aa39.17■■■■□ 3.86
C2CD4D-201ENST00000454109 PRXQ9BXM0 1461 aa39.14■■■■□ 3.86
C2CD4D-201ENST00000454109 TNIKQ9UKE5 1360 aa39.12■■■■□ 3.85
C2CD4D-201ENST00000454109 RAPGEF2Q9Y4G8 1499 aa39.11■■■■□ 3.85
C2CD4D-201ENST00000454109 WDR62O43379 1518 aa39.08■■■■□ 3.85
C2CD4D-201ENST00000454109 ERICH3Q5RHP9 1530 aa39.06■■■■□ 3.84
C2CD4D-201ENST00000454109 ERCC6Q03468 1493 aa39.03■■■■□ 3.84
C2CD4D-201ENST00000454109 IGF1RP08069 1367 aa39.02■■■■□ 3.84
C2CD4D-201ENST00000454109 TARBP1Q13395 1621 aaKnown RBP39.01■■■■□ 3.84
C2CD4D-201ENST00000454109 THOC2Q8NI27 1593 aaKnown RBP39■■■■□ 3.83
C2CD4D-201ENST00000454109 UBTFP17480 764 aaKnown RBP38.95■■■■□ 3.83
C2CD4D-201ENST00000454109 ABCA5Q8WWZ7 1642 aa38.94■■■■□ 3.82
C2CD4D-201ENST00000454109 CEP162Q5TB80 1403 aa38.93■■■■□ 3.82
C2CD4D-201ENST00000454109 TDRD9Q8NDG6 1382 aaKnown RBP38.8■■■■□ 3.8
C2CD4D-201ENST00000454109 CARMIL1Q5VZK9 1371 aa38.79■■■■□ 3.8
C2CD4D-201ENST00000454109 GAPVD1Q14C86 1478 aa38.76■■■■□ 3.8
C2CD4D-201ENST00000454109 CUL7Q14999 1698 aa38.75■■■■□ 3.79
C2CD4D-201ENST00000454109 IFT140Q96RY7 1462 aa38.74■■■■□ 3.79
C2CD4D-201ENST00000454109 PBRM1Q86U86 1689 aa38.63■■■■□ 3.77
C2CD4D-201ENST00000454109 CLIP1P30622 1438 aa38.61■■■■□ 3.77
C2CD4D-201ENST00000454109 ZNF608Q9ULD9 1512 aaPredicted RBP38.59■■■■□ 3.77
C2CD4D-201ENST00000454109 AQRO60306 1485 aaKnown RBP eCLIP38.57■■■■□ 3.77
C2CD4D-201ENST00000454109 EIF4G3O43432 1585 aaKnown RBP38.47■■■■□ 3.75
C2CD4D-201ENST00000454109 GRIN2BQ13224 1484 aa38.45■■■■□ 3.75
C2CD4D-201ENST00000454109 ADAMTS12P58397 1594 aa38.42■■■■□ 3.74
C2CD4D-201ENST00000454109 CTTNBP2Q8WZ74 1663 aa38.35■■■■□ 3.73
C2CD4D-201ENST00000454109 FHAD1B1AJZ9 1412 aa38.34■■■■□ 3.73
C2CD4D-201ENST00000454109 RANGAP1P46060 587 aaPredicted RBP38.33■■■■□ 3.73
C2CD4D-201ENST00000454109 ARAP1Q96P48 1450 aa38.33■■■■□ 3.73
C2CD4D-201ENST00000454109 VPS8Q8N3P4 1428 aa38.29■■■■□ 3.72
C2CD4D-201ENST00000454109 ARHGAP35Q9NRY4 1499 aa38.29■■■■□ 3.72
C2CD4D-201ENST00000454109 SNAPC4Q5SXM2 1469 aa38.24■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms