Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RP1L1Q8IWN7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
RP1L1Q8IWN7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RP1L1Q8IWN7 AC022616.5-201ENST00000518796 181 ntBASIC22.14■■□□□ 1.13
RP1L1Q8IWN7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RP1L1Q8IWN7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RP1L1Q8IWN7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
RP1L1Q8IWN7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.13■■□□□ 1.13
RP1L1Q8IWN7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.13■■□□□ 1.13
RP1L1Q8IWN7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RP1L1Q8IWN7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.13■■□□□ 1.13
RP1L1Q8IWN7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.13■■□□□ 1.13
RP1L1Q8IWN7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.13■■□□□ 1.13
RP1L1Q8IWN7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
RP1L1Q8IWN7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RP1L1Q8IWN7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.12■■□□□ 1.13
RP1L1Q8IWN7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RP1L1Q8IWN7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RP1L1Q8IWN7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.11■■□□□ 1.13
RP1L1Q8IWN7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RP1L1Q8IWN7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
RP1L1Q8IWN7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RP1L1Q8IWN7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.11■■□□□ 1.13
RP1L1Q8IWN7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.1■■□□□ 1.13
RP1L1Q8IWN7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
RP1L1Q8IWN7 MIR4787-201ENST00000607364 84 ntBASIC22.1■■□□□ 1.13
RP1L1Q8IWN7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.09■■□□□ 1.13
RP1L1Q8IWN7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.09■■□□□ 1.13
RP1L1Q8IWN7 AC019171.1-201ENST00000601251 1056 ntBASIC22.09■■□□□ 1.13
RP1L1Q8IWN7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RP1L1Q8IWN7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RP1L1Q8IWN7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RP1L1Q8IWN7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RP1L1Q8IWN7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
RP1L1Q8IWN7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
RP1L1Q8IWN7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.08■■□□□ 1.12
RP1L1Q8IWN7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RP1L1Q8IWN7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RP1L1Q8IWN7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RP1L1Q8IWN7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
RP1L1Q8IWN7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RP1L1Q8IWN7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.07■■□□□ 1.12
RP1L1Q8IWN7 WHAMMP3-201ENST00000611636 1609 ntBASIC22.07■■□□□ 1.12
RP1L1Q8IWN7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
RP1L1Q8IWN7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
RP1L1Q8IWN7 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.06■■□□□ 1.12
RP1L1Q8IWN7 AC087393.1-201ENST00000582896 145 ntBASIC22.06■■□□□ 1.12
RP1L1Q8IWN7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RP1L1Q8IWN7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.06■■□□□ 1.12
RP1L1Q8IWN7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
RP1L1Q8IWN7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RP1L1Q8IWN7 BX664725.1-201ENST00000438252 379 ntBASIC22.05■■□□□ 1.12
RP1L1Q8IWN7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.05■■□□□ 1.12
RP1L1Q8IWN7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.05■■□□□ 1.12
RP1L1Q8IWN7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.05■■□□□ 1.12
RP1L1Q8IWN7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RP1L1Q8IWN7 AP002414.2-202ENST00000590929 1450 ntBASIC22.05■■□□□ 1.12
RP1L1Q8IWN7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RP1L1Q8IWN7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RP1L1Q8IWN7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RP1L1Q8IWN7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RP1L1Q8IWN7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RP1L1Q8IWN7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
RP1L1Q8IWN7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RP1L1Q8IWN7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RP1L1Q8IWN7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.03■■□□□ 1.12
RP1L1Q8IWN7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RP1L1Q8IWN7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
RP1L1Q8IWN7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RP1L1Q8IWN7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
RP1L1Q8IWN7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RP1L1Q8IWN7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RP1L1Q8IWN7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RP1L1Q8IWN7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
RP1L1Q8IWN7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.01■■□□□ 1.11
RP1L1Q8IWN7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22■■□□□ 1.11
RP1L1Q8IWN7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22■■□□□ 1.11
RP1L1Q8IWN7 AC131281.2-201ENST00000520478 145 ntBASIC22■■□□□ 1.11
RP1L1Q8IWN7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22■■□□□ 1.11
RP1L1Q8IWN7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
RP1L1Q8IWN7 RALB-208ENST00000631312 311 ntTSL 5 BASIC22■■□□□ 1.11
RP1L1Q8IWN7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.99■■□□□ 1.11
RP1L1Q8IWN7 MIR638-201ENST00000385237 100 ntBASIC21.98■■□□□ 1.11
RP1L1Q8IWN7 RPS2P7-201ENST00000447334 885 ntBASIC21.98■■□□□ 1.11
RP1L1Q8IWN7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RP1L1Q8IWN7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.98■■□□□ 1.11
RP1L1Q8IWN7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RP1L1Q8IWN7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RP1L1Q8IWN7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms