Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB1Q9Y5F3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PCDHB1Q9Y5F3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
PCDHB1Q9Y5F3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
PCDHB1Q9Y5F3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB1Q9Y5F3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHB1Q9Y5F3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHB1Q9Y5F3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.55■■□□□ 1.52
PCDHB1Q9Y5F3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHB1Q9Y5F3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHB1Q9Y5F3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHB1Q9Y5F3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHB1Q9Y5F3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
PCDHB1Q9Y5F3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHB1Q9Y5F3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDHB1Q9Y5F3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHB1Q9Y5F3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDHB1Q9Y5F3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
PCDHB1Q9Y5F3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB1Q9Y5F3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB1Q9Y5F3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB1Q9Y5F3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.53■■□□□ 1.52
PCDHB1Q9Y5F3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB1Q9Y5F3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB1Q9Y5F3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHB1Q9Y5F3 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHB1Q9Y5F3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.52■■□□□ 1.52
PCDHB1Q9Y5F3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB1Q9Y5F3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB1Q9Y5F3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.52■■□□□ 1.52
PCDHB1Q9Y5F3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB1Q9Y5F3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHB1Q9Y5F3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHB1Q9Y5F3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHB1Q9Y5F3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB1Q9Y5F3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB1Q9Y5F3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB1Q9Y5F3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB1Q9Y5F3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHB1Q9Y5F3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PCDHB1Q9Y5F3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB1Q9Y5F3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
PCDHB1Q9Y5F3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB1Q9Y5F3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
PCDHB1Q9Y5F3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB1Q9Y5F3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB1Q9Y5F3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB1Q9Y5F3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB1Q9Y5F3 KRT18P60-201ENST00000312876 1297 ntBASIC24.48■■□□□ 1.51
PCDHB1Q9Y5F3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHB1Q9Y5F3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHB1Q9Y5F3 AP004609.3-201ENST00000610705 1884 ntBASIC24.48■■□□□ 1.51
PCDHB1Q9Y5F3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHB1Q9Y5F3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
PCDHB1Q9Y5F3 TSPY13P-201ENST00000338964 914 ntBASIC24.47■■□□□ 1.51
PCDHB1Q9Y5F3 AC004987.1-201ENST00000428627 508 ntBASIC24.47■■□□□ 1.51
PCDHB1Q9Y5F3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHB1Q9Y5F3 AC142472.1-201ENST00000612013 1741 ntBASIC24.47■■□□□ 1.51
PCDHB1Q9Y5F3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB1Q9Y5F3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB1Q9Y5F3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB1Q9Y5F3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDHB1Q9Y5F3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB1Q9Y5F3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB1Q9Y5F3 AC092296.2-201ENST00000589470 999 ntBASIC24.46■■□□□ 1.51
PCDHB1Q9Y5F3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB1Q9Y5F3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHB1Q9Y5F3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.45■■□□□ 1.51
PCDHB1Q9Y5F3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB1Q9Y5F3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PCDHB1Q9Y5F3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB1Q9Y5F3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB1Q9Y5F3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB1Q9Y5F3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB1Q9Y5F3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB1Q9Y5F3 ATP5G2P3-201ENST00000429083 425 ntBASIC24.44■■□□□ 1.5
PCDHB1Q9Y5F3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDHB1Q9Y5F3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDHB1Q9Y5F3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB1Q9Y5F3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHB1Q9Y5F3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHB1Q9Y5F3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.43■■□□□ 1.5
PCDHB1Q9Y5F3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
PCDHB1Q9Y5F3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHB1Q9Y5F3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB1Q9Y5F3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
PCDHB1Q9Y5F3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB1Q9Y5F3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB1Q9Y5F3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHB1Q9Y5F3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
PCDHB1Q9Y5F3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.41■■□□□ 1.5
PCDHB1Q9Y5F3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHB1Q9Y5F3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHB1Q9Y5F3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.4■■□□□ 1.5
PCDHB1Q9Y5F3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHB1Q9Y5F3 AC126177.7-201ENST00000547904 679 ntBASIC24.4■■□□□ 1.5
PCDHB1Q9Y5F3 AL359258.2-201ENST00000564063 1566 ntBASIC24.4■■□□□ 1.5
PCDHB1Q9Y5F3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.4■■□□□ 1.5
PCDHB1Q9Y5F3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.39■■□□□ 1.5
PCDHB1Q9Y5F3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms