Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC142472.1-201ENST00000612013 1741 ntBASIC21.46■■□□□ 1.03
CPEB3Q8NE35 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CPEB3Q8NE35 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPEB3Q8NE35 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPEB3Q8NE35 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.46■■□□□ 1.03
CPEB3Q8NE35 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPEB3Q8NE35 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.45■■□□□ 1.02
CPEB3Q8NE35 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPEB3Q8NE35 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPEB3Q8NE35 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPEB3Q8NE35 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPEB3Q8NE35 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.45■■□□□ 1.02
CPEB3Q8NE35 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPEB3Q8NE35 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPEB3Q8NE35 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.44■■□□□ 1.02
CPEB3Q8NE35 AC022413.1-201ENST00000624602 984 ntBASIC21.44■■□□□ 1.02
CPEB3Q8NE35 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.44■■□□□ 1.02
CPEB3Q8NE35 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
CPEB3Q8NE35 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPEB3Q8NE35 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.43■■□□□ 1.02
CPEB3Q8NE35 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CPEB3Q8NE35 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPEB3Q8NE35 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CPEB3Q8NE35 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPEB3Q8NE35 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CPEB3Q8NE35 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPEB3Q8NE35 AL359504.2-201ENST00000605506 1601 ntBASIC21.42■■□□□ 1.02
CPEB3Q8NE35 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPEB3Q8NE35 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPEB3Q8NE35 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPEB3Q8NE35 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPEB3Q8NE35 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CPEB3Q8NE35 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CPEB3Q8NE35 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CPEB3Q8NE35 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPEB3Q8NE35 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPEB3Q8NE35 AL157400.5-201ENST00000507624 621 ntBASIC21.4■■□□□ 1.02
CPEB3Q8NE35 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.4■■□□□ 1.02
CPEB3Q8NE35 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CPEB3Q8NE35 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPEB3Q8NE35 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPEB3Q8NE35 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.4■■□□□ 1.02
CPEB3Q8NE35 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CPEB3Q8NE35 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.4■■□□□ 1.02
CPEB3Q8NE35 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CPEB3Q8NE35 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPEB3Q8NE35 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPEB3Q8NE35 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPEB3Q8NE35 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPEB3Q8NE35 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPEB3Q8NE35 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPEB3Q8NE35 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPEB3Q8NE35 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPEB3Q8NE35 GPX1-201ENST00000419349 1106 ntBASIC21.38■■□□□ 1.01
CPEB3Q8NE35 AC092296.2-201ENST00000589470 999 ntBASIC21.38■■□□□ 1.01
CPEB3Q8NE35 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.38■■□□□ 1.01
CPEB3Q8NE35 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPEB3Q8NE35 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPEB3Q8NE35 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPEB3Q8NE35 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.37■■□□□ 1.01
CPEB3Q8NE35 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPEB3Q8NE35 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.37■■□□□ 1.01
CPEB3Q8NE35 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPEB3Q8NE35 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPEB3Q8NE35 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.36■■□□□ 1.01
CPEB3Q8NE35 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPEB3Q8NE35 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPEB3Q8NE35 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPEB3Q8NE35 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CPEB3Q8NE35 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPEB3Q8NE35 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPEB3Q8NE35 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPEB3Q8NE35 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.35■■□□□ 1.01
CPEB3Q8NE35 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPEB3Q8NE35 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPEB3Q8NE35 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPEB3Q8NE35 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.35■■□□□ 1.01
CPEB3Q8NE35 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPEB3Q8NE35 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.34■■□□□ 1.01
CPEB3Q8NE35 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPEB3Q8NE35 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPEB3Q8NE35 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPEB3Q8NE35 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CPEB3Q8NE35 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CPEB3Q8NE35 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPEB3Q8NE35 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.33■■□□□ 1.01
CPEB3Q8NE35 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.33■■□□□ 1.01
CPEB3Q8NE35 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CPEB3Q8NE35 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.33■■□□□ 1
CPEB3Q8NE35 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.32■■□□□ 1
CPEB3Q8NE35 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.32■■□□□ 1
CPEB3Q8NE35 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CPEB3Q8NE35 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPEB3Q8NE35 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.32■■□□□ 1
CPEB3Q8NE35 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
CPEB3Q8NE35 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.31■■□□□ 1
CPEB3Q8NE35 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPEB3Q8NE35 ECEL1P2-201ENST00000461596 1295 ntBASIC21.31■■□□□ 1
CPEB3Q8NE35 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPEB3Q8NE35 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms