Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
KRT78Q8N1N4 MIR4449-201ENST00000578365 66 ntBASIC23.64■■□□□ 1.37
KRT78Q8N1N4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.62■■□□□ 1.37
KRT78Q8N1N4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.62■■□□□ 1.37
KRT78Q8N1N4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KRT78Q8N1N4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.61■■□□□ 1.37
KRT78Q8N1N4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT78Q8N1N4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.61■■□□□ 1.37
KRT78Q8N1N4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT78Q8N1N4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT78Q8N1N4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT78Q8N1N4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.6■■□□□ 1.37
KRT78Q8N1N4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KRT78Q8N1N4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
KRT78Q8N1N4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.59■■□□□ 1.37
KRT78Q8N1N4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.59■■□□□ 1.37
KRT78Q8N1N4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRT78Q8N1N4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.58■■□□□ 1.37
KRT78Q8N1N4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.37
KRT78Q8N1N4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 AL359504.2-201ENST00000605506 1601 ntBASIC23.57■■□□□ 1.36
KRT78Q8N1N4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 AC060814.1-201ENST00000554326 538 ntBASIC23.56■■□□□ 1.36
KRT78Q8N1N4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT78Q8N1N4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT78Q8N1N4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT78Q8N1N4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT78Q8N1N4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT78Q8N1N4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT78Q8N1N4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KRT78Q8N1N4 AC022413.1-201ENST00000624602 984 ntBASIC23.53■■□□□ 1.36
KRT78Q8N1N4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT78Q8N1N4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT78Q8N1N4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.5■■□□□ 1.35
KRT78Q8N1N4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT78Q8N1N4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT78Q8N1N4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.5■■□□□ 1.35
KRT78Q8N1N4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms