Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
PPARGC1BQ86YN6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC38.69■■■■□ 3.78
PPARGC1BQ86YN6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC38.69■■■■□ 3.78
PPARGC1BQ86YN6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC38.68■■■■□ 3.78
PPARGC1BQ86YN6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC38.68■■■■□ 3.78
PPARGC1BQ86YN6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC38.67■■■■□ 3.78
PPARGC1BQ86YN6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
PPARGC1BQ86YN6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
PPARGC1BQ86YN6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
PPARGC1BQ86YN6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC38.67■■■■□ 3.78
PPARGC1BQ86YN6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC38.66■■■■□ 3.78
PPARGC1BQ86YN6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC38.66■■■■□ 3.78
PPARGC1BQ86YN6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC38.66■■■■□ 3.78
PPARGC1BQ86YN6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC38.66■■■■□ 3.78
PPARGC1BQ86YN6 AL359258.2-201ENST00000564063 1566 ntBASIC38.65■■■■□ 3.78
PPARGC1BQ86YN6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC38.65■■■■□ 3.78
PPARGC1BQ86YN6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC38.65■■■■□ 3.78
PPARGC1BQ86YN6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC38.65■■■■□ 3.78
PPARGC1BQ86YN6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
PPARGC1BQ86YN6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
PPARGC1BQ86YN6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC38.63■■■■□ 3.77
PPARGC1BQ86YN6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC38.62■■■■□ 3.77
PPARGC1BQ86YN6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
PPARGC1BQ86YN6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC38.62■■■■□ 3.77
PPARGC1BQ86YN6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
PPARGC1BQ86YN6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC38.62■■■■□ 3.77
PPARGC1BQ86YN6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC38.6■■■■□ 3.77
PPARGC1BQ86YN6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
PPARGC1BQ86YN6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
PPARGC1BQ86YN6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
PPARGC1BQ86YN6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC38.6■■■■□ 3.77
PPARGC1BQ86YN6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
PPARGC1BQ86YN6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC38.59■■■■□ 3.77
PPARGC1BQ86YN6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
PPARGC1BQ86YN6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC38.59■■■■□ 3.77
PPARGC1BQ86YN6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC38.59■■■■□ 3.77
PPARGC1BQ86YN6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC38.59■■■■□ 3.77
PPARGC1BQ86YN6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC38.59■■■■□ 3.77
PPARGC1BQ86YN6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC38.58■■■■□ 3.77
PPARGC1BQ86YN6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
PPARGC1BQ86YN6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
PPARGC1BQ86YN6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC38.58■■■■□ 3.77
PPARGC1BQ86YN6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC38.58■■■■□ 3.77
PPARGC1BQ86YN6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC38.57■■■■□ 3.76
PPARGC1BQ86YN6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC38.57■■■■□ 3.76
PPARGC1BQ86YN6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC38.56■■■■□ 3.76
PPARGC1BQ86YN6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
PPARGC1BQ86YN6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
PPARGC1BQ86YN6 AP004609.3-201ENST00000610705 1884 ntBASIC38.56■■■■□ 3.76
PPARGC1BQ86YN6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
PPARGC1BQ86YN6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC38.53■■■■□ 3.76
PPARGC1BQ86YN6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC38.53■■■■□ 3.76
PPARGC1BQ86YN6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC38.53■■■■□ 3.76
PPARGC1BQ86YN6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC38.52■■■■□ 3.76
PPARGC1BQ86YN6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC38.52■■■■□ 3.76
PPARGC1BQ86YN6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC38.51■■■■□ 3.76
PPARGC1BQ86YN6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
PPARGC1BQ86YN6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC38.5■■■■□ 3.75
PPARGC1BQ86YN6 AC060814.1-201ENST00000554326 538 ntBASIC38.5■■■■□ 3.75
PPARGC1BQ86YN6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
PPARGC1BQ86YN6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC38.49■■■■□ 3.75
PPARGC1BQ86YN6 AC022413.1-201ENST00000624602 984 ntBASIC38.49■■■■□ 3.75
PPARGC1BQ86YN6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
PPARGC1BQ86YN6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
PPARGC1BQ86YN6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC38.48■■■■□ 3.75
PPARGC1BQ86YN6 ABHD17AP3-201ENST00000503096 1137 ntBASIC38.48■■■■□ 3.75
PPARGC1BQ86YN6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC38.48■■■■□ 3.75
PPARGC1BQ86YN6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC38.47■■■■□ 3.75
PPARGC1BQ86YN6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC38.47■■■■□ 3.75
PPARGC1BQ86YN6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC38.47■■■■□ 3.75
PPARGC1BQ86YN6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC38.47■■■■□ 3.75
PPARGC1BQ86YN6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
PPARGC1BQ86YN6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC38.46■■■■□ 3.75
PPARGC1BQ86YN6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
PPARGC1BQ86YN6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC38.46■■■■□ 3.75
PPARGC1BQ86YN6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
PPARGC1BQ86YN6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
PPARGC1BQ86YN6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC38.46■■■■□ 3.75
PPARGC1BQ86YN6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC38.46■■■■□ 3.75
PPARGC1BQ86YN6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
PPARGC1BQ86YN6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC38.45■■■■□ 3.75
PPARGC1BQ86YN6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC38.45■■■■□ 3.75
PPARGC1BQ86YN6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC38.45■■■■□ 3.75
PPARGC1BQ86YN6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC38.45■■■■□ 3.75
PPARGC1BQ86YN6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
PPARGC1BQ86YN6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
PPARGC1BQ86YN6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC38.44■■■■□ 3.74
PPARGC1BQ86YN6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC38.44■■■■□ 3.74
PPARGC1BQ86YN6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC38.43■■■■□ 3.74
PPARGC1BQ86YN6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
PPARGC1BQ86YN6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC38.43■■■■□ 3.74
PPARGC1BQ86YN6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
PPARGC1BQ86YN6 AL359504.2-201ENST00000605506 1601 ntBASIC38.42■■■■□ 3.74
PPARGC1BQ86YN6 GPX1-201ENST00000419349 1106 ntBASIC38.42■■■■□ 3.74
PPARGC1BQ86YN6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC38.42■■■■□ 3.74
PPARGC1BQ86YN6 AL157400.5-201ENST00000507624 621 ntBASIC38.41■■■■□ 3.74
PPARGC1BQ86YN6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
PPARGC1BQ86YN6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
PPARGC1BQ86YN6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC38.4■■■■□ 3.74
PPARGC1BQ86YN6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC38.4■■■■□ 3.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms