Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
HS1BP3Q53T59 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
HS1BP3Q53T59 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.4■■□□□ 1.98
HS1BP3Q53T59 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HS1BP3Q53T59 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HS1BP3Q53T59 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
HS1BP3Q53T59 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HS1BP3Q53T59 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
HS1BP3Q53T59 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.38■■□□□ 1.97
HS1BP3Q53T59 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.37■■□□□ 1.97
HS1BP3Q53T59 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.37■■□□□ 1.97
HS1BP3Q53T59 AC138932.3-201ENST00000567634 1902 ntBASIC27.37■■□□□ 1.97
HS1BP3Q53T59 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
HS1BP3Q53T59 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
HS1BP3Q53T59 CAHM-201ENST00000604200 896 ntBASIC27.36■■□□□ 1.97
HS1BP3Q53T59 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HS1BP3Q53T59 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.36■■□□□ 1.97
HS1BP3Q53T59 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HS1BP3Q53T59 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
HS1BP3Q53T59 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
HS1BP3Q53T59 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
HS1BP3Q53T59 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
HS1BP3Q53T59 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
HS1BP3Q53T59 AP006261.1-201ENST00000584783 668 ntBASIC27.35■■□□□ 1.97
HS1BP3Q53T59 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
HS1BP3Q53T59 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
HS1BP3Q53T59 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HS1BP3Q53T59 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HS1BP3Q53T59 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
HS1BP3Q53T59 AL391121.1-201ENST00000607967 1349 ntBASIC27.34■■□□□ 1.97
HS1BP3Q53T59 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HS1BP3Q53T59 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HS1BP3Q53T59 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HS1BP3Q53T59 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HS1BP3Q53T59 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HS1BP3Q53T59 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HS1BP3Q53T59 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC27.33■■□□□ 1.97
HS1BP3Q53T59 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
HS1BP3Q53T59 AL133380.1-201ENST00000506013 324 ntBASIC27.33■■□□□ 1.97
HS1BP3Q53T59 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HS1BP3Q53T59 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
HS1BP3Q53T59 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
HS1BP3Q53T59 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
HS1BP3Q53T59 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
HS1BP3Q53T59 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
HS1BP3Q53T59 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.32■■□□□ 1.96
HS1BP3Q53T59 AC022211.4-201ENST00000625094 2161 ntBASIC27.32■■□□□ 1.96
HS1BP3Q53T59 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
HS1BP3Q53T59 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.31■■□□□ 1.96
HS1BP3Q53T59 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
HS1BP3Q53T59 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
HS1BP3Q53T59 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.3■■□□□ 1.96
HS1BP3Q53T59 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
HS1BP3Q53T59 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC27.3■■□□□ 1.96
HS1BP3Q53T59 CLDN5-201ENST00000403084 2357 ntBASIC27.3■■□□□ 1.96
HS1BP3Q53T59 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
HS1BP3Q53T59 CASK-201ENST00000378154 2494 ntTSL 5 BASIC27.3■■□□□ 1.96
HS1BP3Q53T59 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.29■■□□□ 1.96
HS1BP3Q53T59 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
HS1BP3Q53T59 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
HS1BP3Q53T59 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
HS1BP3Q53T59 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HS1BP3Q53T59 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.29■■□□□ 1.96
HS1BP3Q53T59 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC27.29■■□□□ 1.96
HS1BP3Q53T59 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HS1BP3Q53T59 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
HS1BP3Q53T59 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
HS1BP3Q53T59 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.28■■□□□ 1.96
HS1BP3Q53T59 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.28■■□□□ 1.96
HS1BP3Q53T59 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
HS1BP3Q53T59 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
HS1BP3Q53T59 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HS1BP3Q53T59 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HS1BP3Q53T59 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
HS1BP3Q53T59 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
HS1BP3Q53T59 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
HS1BP3Q53T59 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HS1BP3Q53T59 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
HS1BP3Q53T59 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.25■■□□□ 1.95
HS1BP3Q53T59 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
HS1BP3Q53T59 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC27.25■■□□□ 1.95
HS1BP3Q53T59 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
HS1BP3Q53T59 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.25■■□□□ 1.95
HS1BP3Q53T59 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
HS1BP3Q53T59 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
HS1BP3Q53T59 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HS1BP3Q53T59 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HS1BP3Q53T59 AL162393.1-201ENST00000437852 946 ntBASIC27.24■■□□□ 1.95
HS1BP3Q53T59 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HS1BP3Q53T59 AC010501.1-201ENST00000606270 1962 ntBASIC27.24■■□□□ 1.95
HS1BP3Q53T59 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
HS1BP3Q53T59 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
HS1BP3Q53T59 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
HS1BP3Q53T59 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
HS1BP3Q53T59 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.23■■□□□ 1.95
HS1BP3Q53T59 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
HS1BP3Q53T59 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.22■■□□□ 1.95
HS1BP3Q53T59 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
HS1BP3Q53T59 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
HS1BP3Q53T59 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms