RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 NISCHQ9Y2I1 1504 aa46.37■■■■■ 5.01
CCSER2-202ENST00000359979 CCDC180Q9P1Z9 1646 aa39.51■■■■□ 3.92
CCSER2-202ENST00000359979 ZCCHC6Q5VYS8 1495 aaKnown RBP39.29■■■■□ 3.88
CCSER2-202ENST00000359979 SHROOM4Q9ULL8 1493 aa39.22■■■■□ 3.87
CCSER2-202ENST00000359979 SUPT5HO00267 1087 aaKnown RBP38.55■■■■□ 3.76
CCSER2-202ENST00000359979 DCAF1Q9Y4B6 1507 aa38.25■■■■□ 3.71
CCSER2-202ENST00000359979 DCAF8L2P0C7V8 631 aa37.97■■■■□ 3.67
CCSER2-202ENST00000359979 CHIC1Q5VXU3 224 aa37.73■■■■□ 3.63
CCSER2-202ENST00000359979 MYO15BQ96JP2 1530 aa37.55■■■■□ 3.6
CCSER2-202ENST00000359979 ABCC9O60706 1549 aa37.35■■■■□ 3.57
CCSER2-202ENST00000359979 HRCP23327 699 aa36.81■■■■□ 3.48
CCSER2-202ENST00000359979 SCRIBQ14160 1630 aa36.77■■■■□ 3.48
CCSER2-202ENST00000359979 RSF1Q96T23 1441 aaPredicted RBP36.68■■■■□ 3.46
CCSER2-202ENST00000359979 PCGF6Q9BYE7 350 aa36.54■■■■□ 3.44
CCSER2-202ENST00000359979 NACADO15069 1562 aa36.47■■■■□ 3.43
CCSER2-202ENST00000359979 LOC105371045A0A1W2PR82 267 aa36.43■■■■□ 3.42
CCSER2-202ENST00000359979 RB1CC1Q8TDY2 1594 aa36.39■■■■□ 3.42
CCSER2-202ENST00000359979 TRIM41Q8WV44 630 aa36.06■■■■□ 3.36
CCSER2-202ENST00000359979 TRIM26Q12899 539 aaPredicted RBP36.03■■■■□ 3.36
CCSER2-202ENST00000359979 CECR2Q9BXF3 1484 aa36■■■■□ 3.35
CCSER2-202ENST00000359979 MROH2BQ7Z745 1585 aa35.95■■■■□ 3.35
CCSER2-202ENST00000359979 WIZO95785 1651 aa35.74■■■■□ 3.31
CCSER2-202ENST00000359979 PPARGC1BQ86YN6 1023 aaKnown RBP35.74■■■■□ 3.31
CCSER2-202ENST00000359979 BAZ1AQ9NRL2 1556 aaPredicted RBP35.69■■■■□ 3.3
CCSER2-202ENST00000359979 FAM9AQ8IZU1 332 aaPredicted RBP35.54■■■■□ 3.28
CCSER2-202ENST00000359979 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
CCSER2-202ENST00000359979 EIF4G1Q04637 1599 aaKnown RBP35.48■■■■□ 3.27
CCSER2-202ENST00000359979 ZEB1P37275 1124 aaPredicted RBP35.43■■■■□ 3.26
CCSER2-202ENST00000359979 TOP2AP11388 1531 aaKnown RBP35.34■■■■□ 3.25
CCSER2-202ENST00000359979 SMARCA4P51532 1647 aa35.29■■■■□ 3.24
CCSER2-202ENST00000359979 BICRAQ9NZM4 1560 aa35.15■■■■□ 3.22
CCSER2-202ENST00000359979 PABPN1Q86U42 306 aaKnown RBP eCLIP35.1■■■■□ 3.21
CCSER2-202ENST00000359979 SMARCA2P51531 1590 aa35.1■■■■□ 3.21
CCSER2-202ENST00000359979 CCDC88BA6NC98 1476 aa35.09■■■■□ 3.21
CCSER2-202ENST00000359979 EHMT2Q96KQ7 1210 aa35.05■■■■□ 3.2
CCSER2-202ENST00000359979 ABCC8Q09428 1581 aa34.93■■■■□ 3.18
CCSER2-202ENST00000359979 WRNQ14191 1432 aaPredicted RBP eCLIP34.78■■■■□ 3.16
CCSER2-202ENST00000359979 EEA1Q15075 1411 aa34.78■■■■□ 3.16
CCSER2-202ENST00000359979 PEG3Q9GZU2 1588 aa34.73■■■■□ 3.15
CCSER2-202ENST00000359979 TNIKQ9UKE5 1360 aa34.66■■■■□ 3.14
CCSER2-202ENST00000359979 SOGA1O94964 1423 aa34.64■■■■□ 3.14
CCSER2-202ENST00000359979 CEP162Q5TB80 1403 aa34.63■■■■□ 3.13
CCSER2-202ENST00000359979 CSRNP3Q8WYN3 585 aa34.53■■■■□ 3.12
CCSER2-202ENST00000359979 GOLGA3Q08378 1498 aa34.43■■■■□ 3.1
CCSER2-202ENST00000359979 RUSC2Q8N2Y8 1516 aa34.42■■■■□ 3.1
CCSER2-202ENST00000359979 CCER1Q8TC90 406 aaPredicted RBP34.36■■■■□ 3.09
CCSER2-202ENST00000359979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.35■■■■□ 3.09
CCSER2-202ENST00000359979 ATAD2BQ9ULI0 1458 aa34.33■■■■□ 3.09
CCSER2-202ENST00000359979 UBTFP17480 764 aaKnown RBP34.28■■■■□ 3.08
CCSER2-202ENST00000359979 SYNJ1O43426 1573 aa34.25■■■■□ 3.07
CCSER2-202ENST00000359979 KIF21BO75037 1637 aa34.24■■■■□ 3.07
CCSER2-202ENST00000359979 CEP164Q9UPV0 1460 aa34.24■■■■□ 3.07
CCSER2-202ENST00000359979 BAZ1BQ9UIG0 1483 aaKnown RBP34.23■■■■□ 3.07
CCSER2-202ENST00000359979 TTBK1Q5TCY1 1321 aaPredicted RBP34.02■■■■□ 3.04
CCSER2-202ENST00000359979 CLIP1P30622 1438 aa33.97■■■■□ 3.03
CCSER2-202ENST00000359979 TOP2BQ02880 1626 aa33.93■■■■□ 3.02
CCSER2-202ENST00000359979 VPS8Q8N3P4 1428 aa33.89■■■■□ 3.02
CCSER2-202ENST00000359979 SCAF1Q9H7N4 1312 aaKnown RBP33.86■■■■□ 3.01
CCSER2-202ENST00000359979 RAPGEF2Q9Y4G8 1499 aa33.84■■■■□ 3.01
CCSER2-202ENST00000359979 BIVM-ERCC5R4GMW8 1640 aa33.83■■■■□ 3.01
CCSER2-202ENST00000359979 CC2D2AQ9P2K1 1620 aa33.8■■■■□ 3
CCSER2-202ENST00000359979 DIEXFQ68CQ4 756 aaKnown RBP33.78■■■■□ 3
CCSER2-202ENST00000359979 HMGXB3Q12766 1538 aa33.76■■■■□ 3
CCSER2-202ENST00000359979 NCAPD3P42695 1498 aa33.71■■■□□ 2.99
CCSER2-202ENST00000359979 ERICH3Q5RHP9 1530 aa33.7■■■□□ 2.99
CCSER2-202ENST00000359979 APLP2Q06481 763 aa33.64■■■□□ 2.98
CCSER2-202ENST00000359979 DNAJC5BQ9UF47 199 aa33.64■■■□□ 2.98
CCSER2-202ENST00000359979 PRXQ9BXM0 1461 aa33.63■■■□□ 2.97
CCSER2-202ENST00000359979 ACIN1Q9UKV3 1341 aaKnown RBP33.63■■■□□ 2.97
CCSER2-202ENST00000359979 PELP1Q8IZL8 1130 aaKnown RBP33.59■■■□□ 2.97
CCSER2-202ENST00000359979 ZNF316A6NFI3 1004 aaPredicted RBP33.58■■■□□ 2.97
CCSER2-202ENST00000359979 HNRNPUL2Q1KMD3 747 aaKnown RBP33.51■■■□□ 2.96
CCSER2-202ENST00000359979 CUX1P39880 1505 aa33.49■■■□□ 2.95
CCSER2-202ENST00000359979 CENPBP07199 599 aaPredicted RBP33.48■■■□□ 2.95
CCSER2-202ENST00000359979 NEUROD1Q13562 356 aa33.46■■■□□ 2.95
CCSER2-202ENST00000359979 CFTRP13569 1480 aa33.45■■■□□ 2.94
CCSER2-202ENST00000359979 KIF27Q86VH2 1401 aa33.42■■■□□ 2.94
CCSER2-202ENST00000359979 ARAP1Q96P48 1450 aa33.42■■■□□ 2.94
CCSER2-202ENST00000359979 RANGAP1P46060 587 aaPredicted RBP33.32■■■□□ 2.92
CCSER2-202ENST00000359979 CLSPNQ9HAW4 1339 aa33.28■■■□□ 2.92
CCSER2-202ENST00000359979 PRDM2Q13029 1718 aa33.25■■■□□ 2.91
CCSER2-202ENST00000359979 RRBP1Q9P2E9 1410 aaKnown RBP33.16■■■□□ 2.9
CCSER2-202ENST00000359979 GTF3C3Q9Y5Q9 886 aa33.13■■■□□ 2.89
CCSER2-202ENST00000359979 ARHGAP35Q9NRY4 1499 aa33.11■■■□□ 2.89
CCSER2-202ENST00000359979 KANK4Q5T7N3 995 aaPredicted RBP33.11■■■□□ 2.89
CCSER2-202ENST00000359979 DHX57Q6P158 1386 aaKnown RBP33.09■■■□□ 2.89
CCSER2-202ENST00000359979 CUX2O14529 1486 aa33.05■■■□□ 2.88
CCSER2-202ENST00000359979 CADPSQ9ULU8 1353 aa33.01■■■□□ 2.87
CCSER2-202ENST00000359979 IGF1RP08069 1367 aa33■■■□□ 2.87
CCSER2-202ENST00000359979 MIER1Q8N108 512 aa32.98■■■□□ 2.87
CCSER2-202ENST00000359979 MAP3K1Q13233 1512 aa32.96■■■□□ 2.87
CCSER2-202ENST00000359979 CCNB3Q8WWL7 1395 aa32.94■■■□□ 2.86
CCSER2-202ENST00000359979 FGD5Q6ZNL6 1462 aa32.87■■■□□ 2.85
CCSER2-202ENST00000359979 CARMIL1Q5VZK9 1371 aa32.85■■■□□ 2.85
CCSER2-202ENST00000359979 TIAM1Q13009 1591 aa32.82■■■□□ 2.85
CCSER2-202ENST00000359979 YTHDC1Q96MU7 727 aaKnown RBP32.79■■■□□ 2.84
CCSER2-202ENST00000359979 FHAD1B1AJZ9 1412 aa32.7■■■□□ 2.83
CCSER2-202ENST00000359979 LRRC9Q6ZRR7 1453 aa32.69■■■□□ 2.82
CCSER2-202ENST00000359979 FANCD2Q9BXW9 1451 aa32.66■■■□□ 2.82
CCSER2-202ENST00000359979 DNMBPQ6XZF7 1577 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms