Protein–RNA interactions for Protein: P47898

HTR5A, 5-hydroxytryptamine receptor 5A, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR5AP47898 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HTR5AP47898 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HTR5AP47898 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HTR5AP47898 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HTR5AP47898 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HTR5AP47898 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HTR5AP47898 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HTR5AP47898 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HTR5AP47898 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR5AP47898 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR5AP47898 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.48■■□□□ 1.03
HTR5AP47898 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTR5AP47898 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HTR5AP47898 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTR5AP47898 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HTR5AP47898 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.48■■□□□ 1.03
HTR5AP47898 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.48■■□□□ 1.03
HTR5AP47898 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HTR5AP47898 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.48■■□□□ 1.03
HTR5AP47898 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTR5AP47898 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.47■■□□□ 1.03
HTR5AP47898 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.47■■□□□ 1.03
HTR5AP47898 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.47■■□□□ 1.03
HTR5AP47898 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.47■■□□□ 1.03
HTR5AP47898 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HTR5AP47898 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTR5AP47898 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR5AP47898 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.46■■□□□ 1.03
HTR5AP47898 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HTR5AP47898 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR5AP47898 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTR5AP47898 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
HTR5AP47898 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HTR5AP47898 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.45■■□□□ 1.02
HTR5AP47898 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.45■■□□□ 1.02
HTR5AP47898 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.45■■□□□ 1.02
HTR5AP47898 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HTR5AP47898 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HTR5AP47898 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.44■■□□□ 1.02
HTR5AP47898 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HTR5AP47898 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.43■■□□□ 1.02
HTR5AP47898 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.43■■□□□ 1.02
HTR5AP47898 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HTR5AP47898 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.43■■□□□ 1.02
HTR5AP47898 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.43■■□□□ 1.02
HTR5AP47898 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HTR5AP47898 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HTR5AP47898 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
HTR5AP47898 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.42■■□□□ 1.02
HTR5AP47898 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HTR5AP47898 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.41■■□□□ 1.02
HTR5AP47898 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HTR5AP47898 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HTR5AP47898 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HTR5AP47898 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.41■■□□□ 1.02
HTR5AP47898 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.41■■□□□ 1.02
HTR5AP47898 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.4■■□□□ 1.02
HTR5AP47898 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.4■■□□□ 1.02
HTR5AP47898 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.02
HTR5AP47898 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
HTR5AP47898 MIR4449-201ENST00000578365 66 ntBASIC21.39■■□□□ 1.01
HTR5AP47898 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTR5AP47898 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTR5AP47898 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTR5AP47898 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.37■■□□□ 1.01
HTR5AP47898 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTR5AP47898 AL359504.2-201ENST00000605506 1601 ntBASIC21.37■■□□□ 1.01
HTR5AP47898 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR5AP47898 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HTR5AP47898 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR5AP47898 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR5AP47898 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR5AP47898 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR5AP47898 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
HTR5AP47898 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.36■■□□□ 1.01
HTR5AP47898 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR5AP47898 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTR5AP47898 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTR5AP47898 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTR5AP47898 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.35■■□□□ 1.01
HTR5AP47898 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.35■■□□□ 1.01
HTR5AP47898 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTR5AP47898 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTR5AP47898 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
HTR5AP47898 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HTR5AP47898 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTR5AP47898 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTR5AP47898 AC060814.1-201ENST00000554326 538 ntBASIC21.34■■□□□ 1.01
HTR5AP47898 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTR5AP47898 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTR5AP47898 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTR5AP47898 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTR5AP47898 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.34■■□□□ 1.01
HTR5AP47898 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTR5AP47898 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTR5AP47898 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.33■■□□□ 1.01
HTR5AP47898 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTR5AP47898 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.33■■□□□ 1
HTR5AP47898 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.33■■□□□ 1
HTR5AP47898 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms