Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.852e-9■□□□□ 9.9
SRSF1Q07955 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.48■□□□□ 0.711e-6■□□□□ 9.9
SRSF1Q07955 MBNL3-208ENST00000436215 891 ntTSL 35.91□□□□□ -1.461e-6■□□□□ 9.9
SRSF1Q07955 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.53■■□□□ 1.522e-9■□□□□ 9.9
SRSF1Q07955 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.322e-9■□□□□ 9.9
SRSF1Q07955 GDI1-211ENST00000481304 1014 ntTSL 1 (best)15.91■□□□□ 0.142e-9■□□□□ 9.9
SRSF1Q07955 GDI1-202ENST00000434049 816 ntTSL 514.63□□□□□ -0.072e-9■□□□□ 9.9
SRSF1Q07955 GDI1-203ENST00000445564 568 ntTSL 414.63□□□□□ -0.072e-9■□□□□ 9.9
SRSF1Q07955 GDI1-209ENST00000475976 600 ntTSL 214.63□□□□□ -0.072e-9■□□□□ 9.9
SRSF1Q07955 GDI1-201ENST00000415109 560 ntTSL 413.32□□□□□ -0.282e-9■□□□□ 9.9
SRSF1Q07955 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.74□□□□□ -0.376e-10■□□□□ 9.9
SRSF1Q07955 SNHG25-201ENST00000580828 106 ntTSL 211.45□□□□□ -0.586e-10■□□□□ 9.9
SRSF1Q07955 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.66■□□□□ 0.424e-6■□□□□ 9.9
SRSF1Q07955 SUN1-226ENST00000467483 992 ntTSL 214.45□□□□□ -0.14e-6■□□□□ 9.9
SRSF1Q07955 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.66□□□□□ -0.224e-6■□□□□ 9.9
SRSF1Q07955 SUN1-214ENST00000435699 676 ntTSL 311.35□□□□□ -0.594e-6■□□□□ 9.9
SRSF1Q07955 SUN1-230ENST00000477950 575 ntTSL 310.75□□□□□ -0.694e-6■□□□□ 9.9
SRSF1Q07955 PEG3-203ENST00000594389 411 ntTSL 322.05■■□□□ 1.121e-8■□□□□ 9.9
SRSF1Q07955 PEG3-204ENST00000594706 583 ntTSL 318.33■□□□□ 0.521e-8■□□□□ 9.9
SRSF1Q07955 PEG3-205ENST00000596261 570 ntTSL 49.15□□□□□ -0.941e-8■□□□□ 9.9
SRSF1Q07955 TJAP1-206ENST00000372454 581 ntTSL 514.39□□□□□ -0.112e-6■□□□□ 9.9
SRSF1Q07955 NPEPL1-202ENST00000525068 768 ntTSL 215.05■□□□□ -04e-13■□□□□ 9.9
SRSF1Q07955 ABCD4-218ENST00000553486 1842 ntTSL 1 (best)13.44□□□□□ -0.264e-7■□□□□ 9.9
SRSF1Q07955 ABCD4-210ENST00000481348 1177 ntTSL 512.83□□□□□ -0.364e-7■□□□□ 9.9
SRSF1Q07955 ABCD4-207ENST00000474270 794 ntTSL 512.49□□□□□ -0.414e-7■□□□□ 9.9
SRSF1Q07955 ABCD4-219ENST00000553745 1770 ntTSL 211.92□□□□□ -0.54e-7■□□□□ 9.9
SRSF1Q07955 ABCD4-212ENST00000484380 1823 ntTSL 310.94□□□□□ -0.664e-7■□□□□ 9.9
SRSF1Q07955 ABCD4-223ENST00000555904 582 ntTSL 310.92□□□□□ -0.664e-7■□□□□ 9.9
SRSF1Q07955 ABCD4-225ENST00000556517 947 ntTSL 310.92□□□□□ -0.664e-7■□□□□ 9.9
SRSF1Q07955 ABCD4-211ENST00000481935 2336 ntTSL 510.89□□□□□ -0.674e-7■□□□□ 9.9
SRSF1Q07955 ABCD4-201ENST00000356924 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.964e-7■□□□□ 9.9
SRSF1Q07955 SARS-205ENST00000477544 694 ntTSL 29.73□□□□□ -0.852e-7■□□□□ 9.9
SRSF1Q07955 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.56■□□□□ 0.881e-6■□□□□ 9.9
SRSF1Q07955 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.85■□□□□ 0.611e-6■□□□□ 9.9
SRSF1Q07955 DAZAP1-204ENST00000586579 619 ntTSL 321.15■□□□□ 0.982e-9■□□□□ 9.8
SRSF1Q07955 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.39■□□□□ 0.692e-9■□□□□ 9.8
SRSF1Q07955 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.562e-9■□□□□ 9.8
SRSF1Q07955 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.352e-9■□□□□ 9.8
SRSF1Q07955 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.22e-9■□□□□ 9.8
SRSF1Q07955 DAZAP1-209ENST00000590419 508 ntTSL 313.95□□□□□ -0.182e-9■□□□□ 9.8
SRSF1Q07955 DAZAP1-210ENST00000592453 1021 ntTSL 512.34□□□□□ -0.432e-9■□□□□ 9.8
SRSF1Q07955 DAZAP1-206ENST00000587833 560 ntTSL 510.02□□□□□ -0.812e-9■□□□□ 9.8
SRSF1Q07955 DAZAP1-207ENST00000589484 3414 ntTSL 29.97□□□□□ -0.812e-9■□□□□ 9.8
SRSF1Q07955 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.362e-9■□□□□ 9.8
SRSF1Q07955 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.532e-9■□□□□ 9.8
SRSF1Q07955 P4HA1-206ENST00000464310 415 ntTSL 54.78□□□□□ -1.641e-6■□□□□ 9.8
SRSF1Q07955 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.19e-9■□□□□ 9.8
SRSF1Q07955 AP1G2-234ENST00000557619 1004 ntTSL 212.34□□□□□ -0.436e-8■□□□□ 9.8
SRSF1Q07955 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.23e-8■□□□□ 9.8
SRSF1Q07955 SRRM2-222ENST00000575009 1146 ntTSL 524.39■■□□□ 1.492e-9■□□□□ 9.8
SRSF1Q07955 SRRM2-229ENST00000576894 2210 ntTSL 1 (best)15.59■□□□□ 0.092e-9■□□□□ 9.8
SRSF1Q07955 SRRM2-230ENST00000576924 3314 ntTSL 1 (best)12.82□□□□□ -0.362e-9■□□□□ 9.8
SRSF1Q07955 SRRM2-208ENST00000571378 2870 ntTSL 1 (best)11.09□□□□□ -0.632e-9■□□□□ 9.8
SRSF1Q07955 KDM6B-206ENST00000575521 219 ntTSL 514.42□□□□□ -0.15e-8■□□□□ 9.8
SRSF1Q07955 MAPK12-210ENST00000497738 2021 ntTSL 1 (best)16.32■□□□□ 0.23e-6■□□□□ 9.8
SRSF1Q07955 MAPK12-205ENST00000482969 2101 ntTSL 214.19□□□□□ -0.143e-6■□□□□ 9.8
SRSF1Q07955 MAPK12-208ENST00000496942 2763 ntTSL 214□□□□□ -0.173e-6■□□□□ 9.8
SRSF1Q07955 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.22□□□□□ -0.453e-6■□□□□ 9.8
SRSF1Q07955 UBE2K-207ENST00000513231 871 ntTSL 1 (best)22.64■■□□□ 1.219e-8■□□□□ 9.8
SRSF1Q07955 UBE2K-206ENST00000510934 589 ntTSL 220.06■□□□□ 0.89e-8■□□□□ 9.8
SRSF1Q07955 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.56■□□□□ 0.729e-8■□□□□ 9.8
SRSF1Q07955 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.411e-6■□□□□ 9.8
SRSF1Q07955 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.54■□□□□ 0.241e-6■□□□□ 9.8
SRSF1Q07955 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.229e-8■□□□□ 9.8
SRSF1Q07955 CHMP4A-207ENST00000533523 1266 ntTSL 1 (best)15.98■□□□□ 0.151e-6■□□□□ 9.8
SRSF1Q07955 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.52■□□□□ 0.081e-6■□□□□ 9.8
SRSF1Q07955 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.18■□□□□ 0.029e-8■□□□□ 9.8
SRSF1Q07955 UBE2K-202ENST00000438068 2262 ntTSL 214.3□□□□□ -0.129e-8■□□□□ 9.8
SRSF1Q07955 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.68□□□□□ -0.221e-6■□□□□ 9.8
SRSF1Q07955 PKP4-204ENST00000421462 3099 ntTSL 212.83□□□□□ -0.369e-8■□□□□ 9.8
SRSF1Q07955 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.599e-8■□□□□ 9.8
SRSF1Q07955 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC11.34□□□□□ -0.599e-8■□□□□ 9.8
SRSF1Q07955 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.741e-6■□□□□ 9.8
SRSF1Q07955 PKP4-216ENST00000495123 580 ntTSL 57.9□□□□□ -1.149e-8■□□□□ 9.8
SRSF1Q07955 PKP4-210ENST00000480171 2772 ntTSL 26.78□□□□□ -1.329e-8■□□□□ 9.8
SRSF1Q07955 TMEM50B-204ENST00000442441 982 ntTSL 1 (best)20.6■□□□□ 0.893e-6■□□□□ 9.8
SRSF1Q07955 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.193e-6■□□□□ 9.8
SRSF1Q07955 TMEM50B-201ENST00000420455 3062 ntTSL 1 (best)10.97□□□□□ -0.653e-6■□□□□ 9.8
SRSF1Q07955 TMEM50B-203ENST00000441128 634 ntTSL 55□□□□□ -1.613e-6■□□□□ 9.8
SRSF1Q07955 FBXO18-208ENST00000470089 979 ntTSL 527.33■■□□□ 1.976e-7■□□□□ 9.8
SRSF1Q07955 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.15□□□□□ -0.36e-7■□□□□ 9.8
SRSF1Q07955 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.316e-7■□□□□ 9.8
SRSF1Q07955 FBXO18-206ENST00000462507 906 ntTSL 212.57□□□□□ -0.46e-7■□□□□ 9.8
SRSF1Q07955 HERC1-206ENST00000559996 443 ntTSL 28.23□□□□□ -1.099e-7■□□□□ 9.8
SRSF1Q07955 AARS-204ENST00000566969 610 ntTSL 28.34□□□□□ -1.072e-9■□□□□ 9.8
SRSF1Q07955 AL034397.3-201ENST00000618234 1690 ntTSL 1 (best)6.78□□□□□ -1.321e-6■□□□□ 9.8
SRSF1Q07955 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC6.06□□□□□ -1.441e-6■□□□□ 9.8
SRSF1Q07955 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.281e-6■□□□□ 9.8
SRSF1Q07955 ACADVL-237ENST00000583858 1015 ntTSL 516.7■□□□□ 0.264e-8■□□□□ 9.8
SRSF1Q07955 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.94■□□□□ 0.144e-8■□□□□ 9.8
SRSF1Q07955 ACADVL-201ENST00000322910 2352 ntTSL 215.36■□□□□ 0.054e-8■□□□□ 9.8
SRSF1Q07955 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.044e-8■□□□□ 9.8
SRSF1Q07955 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.81□□□□□ -0.044e-8■□□□□ 9.8
SRSF1Q07955 SRRM2-206ENST00000571041 498 ntTSL 414.63□□□□□ -0.078e-14■□□□□ 9.8
SRSF1Q07955 SRRM2-204ENST00000570705 675 ntTSL 314.01□□□□□ -0.178e-14■□□□□ 9.8
SRSF1Q07955 SRRM2-213ENST00000573311 732 ntTSL 213.94□□□□□ -0.188e-14■□□□□ 9.8
SRSF1Q07955 SRRM2-210ENST00000572721 841 ntTSL 213.38□□□□□ -0.278e-14■□□□□ 9.8
SRSF1Q07955 ACADVL-216ENST00000578824 720 ntTSL 210.1□□□□□ -0.794e-8■□□□□ 9.8
SRSF1Q07955 SRRM2-211ENST00000572883 887 ntTSL 29.55□□□□□ -0.888e-14■□□□□ 9.8
SRSF1Q07955 EXOC7-210ENST00000460476 555 ntTSL 417.63■□□□□ 0.418e-10■□□□□ 9.8
Retrieved 100 of 14,836 protein–RNA pairs in 369.8 ms