RNA–Protein interactions for RNA: ENST00000576894.5

SRRM2-229, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 2,210 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-229ENST00000576894 NISCHQ9Y2I1 1504 aa43.7■■■■■ 4.59
SRRM2-229ENST00000576894 CCDC180Q9P1Z9 1646 aa37.37■■■■□ 3.57
SRRM2-229ENST00000576894 ZCCHC6Q5VYS8 1495 aaKnown RBP36.95■■■■□ 3.51
SRRM2-229ENST00000576894 SHROOM4Q9ULL8 1493 aa36.73■■■■□ 3.47
SRRM2-229ENST00000576894 DCAF8L2P0C7V8 631 aa36.04■■■■□ 3.36
SRRM2-229ENST00000576894 DCAF1Q9Y4B6 1507 aa36.04■■■■□ 3.36
SRRM2-229ENST00000576894 SUPT5HO00267 1087 aaKnown RBP35.93■■■■□ 3.34
SRRM2-229ENST00000576894 MYO15BQ96JP2 1530 aa35.12■■■■□ 3.21
SRRM2-229ENST00000576894 CHIC1Q5VXU3 224 aa35.04■■■■□ 3.2
SRRM2-229ENST00000576894 ABCC9O60706 1549 aa34.81■■■■□ 3.16
SRRM2-229ENST00000576894 SCRIBQ14160 1630 aa34.72■■■■□ 3.15
SRRM2-229ENST00000576894 NACADO15069 1562 aa34.57■■■■□ 3.12
SRRM2-229ENST00000576894 RSF1Q96T23 1441 aaPredicted RBP34.45■■■■□ 3.11
SRRM2-229ENST00000576894 RB1CC1Q8TDY2 1594 aa34.09■■■■□ 3.05
SRRM2-229ENST00000576894 CECR2Q9BXF3 1484 aa33.97■■■■□ 3.03
SRRM2-229ENST00000576894 MROH2BQ7Z745 1585 aa33.88■■■■□ 3.01
SRRM2-229ENST00000576894 LOC105371045A0A1W2PR82 267 aa33.82■■■■□ 3
SRRM2-229ENST00000576894 WIZO95785 1651 aa33.65■■■□□ 2.98
SRRM2-229ENST00000576894 TRIM41Q8WV44 630 aa33.62■■■□□ 2.97
SRRM2-229ENST00000576894 BAZ1AQ9NRL2 1556 aaPredicted RBP33.59■■■□□ 2.97
SRRM2-229ENST00000576894 HRCP23327 699 aa33.59■■■□□ 2.97
SRRM2-229ENST00000576894 PCGF6Q9BYE7 350 aa33.56■■■□□ 2.96
SRRM2-229ENST00000576894 UNC13AQ9UPW8 1703 aa33.39■■■□□ 2.94
SRRM2-229ENST00000576894 SMARCA4P51532 1647 aa33.31■■■□□ 2.92
SRRM2-229ENST00000576894 EIF4G1Q04637 1599 aaKnown RBP33.27■■■□□ 2.92
SRRM2-229ENST00000576894 TOP2AP11388 1531 aaKnown RBP33.25■■■□□ 2.91
SRRM2-229ENST00000576894 TRIM26Q12899 539 aaPredicted RBP33.16■■■□□ 2.9
SRRM2-229ENST00000576894 FAM9AQ8IZU1 332 aaPredicted RBP33.16■■■□□ 2.9
SRRM2-229ENST00000576894 BICRAQ9NZM4 1560 aa33.05■■■□□ 2.88
SRRM2-229ENST00000576894 CCDC88BA6NC98 1476 aa33.03■■■□□ 2.88
SRRM2-229ENST00000576894 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.88
SRRM2-229ENST00000576894 SMARCA2P51531 1590 aa33.02■■■□□ 2.88
SRRM2-229ENST00000576894 EHMT2Q96KQ7 1210 aa32.9■■■□□ 2.86
SRRM2-229ENST00000576894 PEG3Q9GZU2 1588 aa32.81■■■□□ 2.84
SRRM2-229ENST00000576894 ABCC8Q09428 1581 aa32.76■■■□□ 2.83
SRRM2-229ENST00000576894 PPARGC1BQ86YN6 1023 aaKnown RBP32.7■■■□□ 2.82
SRRM2-229ENST00000576894 ATAD2BQ9ULI0 1458 aa32.5■■■□□ 2.79
SRRM2-229ENST00000576894 EEA1Q15075 1411 aa32.47■■■□□ 2.79
SRRM2-229ENST00000576894 SOGA1O94964 1423 aa32.44■■■□□ 2.78
SRRM2-229ENST00000576894 ZEB1P37275 1124 aaPredicted RBP32.43■■■□□ 2.78
SRRM2-229ENST00000576894 BAZ1BQ9UIG0 1483 aaKnown RBP32.36■■■□□ 2.77
SRRM2-229ENST00000576894 WRNQ14191 1432 aaPredicted RBP eCLIP32.35■■■□□ 2.77
SRRM2-229ENST00000576894 TNIKQ9UKE5 1360 aa32.31■■■□□ 2.76
SRRM2-229ENST00000576894 CSRNP3Q8WYN3 585 aa32.29■■■□□ 2.76
SRRM2-229ENST00000576894 RUSC2Q8N2Y8 1516 aa32.27■■■□□ 2.76
SRRM2-229ENST00000576894 CEP162Q5TB80 1403 aa32.24■■■□□ 2.75
SRRM2-229ENST00000576894 SYNJ1O43426 1573 aa32.18■■■□□ 2.74
SRRM2-229ENST00000576894 GOLGA3Q08378 1498 aa32.13■■■□□ 2.73
SRRM2-229ENST00000576894 UBTFP17480 764 aaKnown RBP32.01■■■□□ 2.71
SRRM2-229ENST00000576894 KIF21BO75037 1637 aa31.99■■■□□ 2.71
SRRM2-229ENST00000576894 CEP164Q9UPV0 1460 aa31.99■■■□□ 2.71
SRRM2-229ENST00000576894 HMGXB3Q12766 1538 aa31.97■■■□□ 2.71
SRRM2-229ENST00000576894 NCAPD3P42695 1498 aa31.97■■■□□ 2.71
SRRM2-229ENST00000576894 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
SRRM2-229ENST00000576894 BIVM-ERCC5R4GMW8 1640 aa31.81■■■□□ 2.68
SRRM2-229ENST00000576894 TTBK1Q5TCY1 1321 aaPredicted RBP31.73■■■□□ 2.67
SRRM2-229ENST00000576894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.71■■■□□ 2.67
SRRM2-229ENST00000576894 CLIP1P30622 1438 aa31.7■■■□□ 2.66
SRRM2-229ENST00000576894 RAPGEF2Q9Y4G8 1499 aa31.69■■■□□ 2.66
SRRM2-229ENST00000576894 CCER1Q8TC90 406 aaPredicted RBP31.65■■■□□ 2.66
SRRM2-229ENST00000576894 CFTRP13569 1480 aa31.63■■■□□ 2.65
SRRM2-229ENST00000576894 VPS8Q8N3P4 1428 aa31.58■■■□□ 2.65
SRRM2-229ENST00000576894 CUX1P39880 1505 aa31.58■■■□□ 2.65
SRRM2-229ENST00000576894 ERICH3Q5RHP9 1530 aa31.54■■■□□ 2.64
SRRM2-229ENST00000576894 PRXQ9BXM0 1461 aa31.53■■■□□ 2.64
SRRM2-229ENST00000576894 KIF27Q86VH2 1401 aa31.39■■■□□ 2.62
SRRM2-229ENST00000576894 PRDM2Q13029 1718 aa31.38■■■□□ 2.61
SRRM2-229ENST00000576894 RANGAP1P46060 587 aaPredicted RBP31.36■■■□□ 2.61
SRRM2-229ENST00000576894 APLP2Q06481 763 aa31.29■■■□□ 2.6
SRRM2-229ENST00000576894 CADPSQ9ULU8 1353 aa31.28■■■□□ 2.6
SRRM2-229ENST00000576894 ARAP1Q96P48 1450 aa31.25■■■□□ 2.59
SRRM2-229ENST00000576894 CC2D2AQ9P2K1 1620 aa31.14■■■□□ 2.58
SRRM2-229ENST00000576894 HNRNPUL2Q1KMD3 747 aaKnown RBP31.11■■■□□ 2.57
SRRM2-229ENST00000576894 CUX2O14529 1486 aa31.07■■■□□ 2.56
SRRM2-229ENST00000576894 IGF1RP08069 1367 aa31.07■■■□□ 2.56
SRRM2-229ENST00000576894 FGD5Q6ZNL6 1462 aa31.02■■■□□ 2.56
SRRM2-229ENST00000576894 ARHGAP35Q9NRY4 1499 aa31.01■■■□□ 2.55
SRRM2-229ENST00000576894 DIEXFQ68CQ4 756 aaKnown RBP30.94■■■□□ 2.54
SRRM2-229ENST00000576894 FANCD2Q9BXW9 1451 aa30.93■■■□□ 2.54
SRRM2-229ENST00000576894 KANK4Q5T7N3 995 aaPredicted RBP30.93■■■□□ 2.54
SRRM2-229ENST00000576894 CARMIL1Q5VZK9 1371 aa30.91■■■□□ 2.54
SRRM2-229ENST00000576894 RRBP1Q9P2E9 1410 aaKnown RBP30.86■■■□□ 2.53
SRRM2-229ENST00000576894 ZNF316A6NFI3 1004 aaPredicted RBP30.85■■■□□ 2.53
SRRM2-229ENST00000576894 DNMBPQ6XZF7 1577 aa30.83■■■□□ 2.53
SRRM2-229ENST00000576894 MAP3K1Q13233 1512 aa30.76■■■□□ 2.51
SRRM2-229ENST00000576894 ABCA10Q8WWZ4 1543 aa30.75■■■□□ 2.51
SRRM2-229ENST00000576894 CLSPNQ9HAW4 1339 aa30.75■■■□□ 2.51
SRRM2-229ENST00000576894 TOPBP1Q92547 1522 aa30.73■■■□□ 2.51
SRRM2-229ENST00000576894 NESP48681 1621 aa30.71■■■□□ 2.51
SRRM2-229ENST00000576894 POLA1P09884 1462 aaPredicted RBP30.69■■■□□ 2.5
SRRM2-229ENST00000576894 SCAF1Q9H7N4 1312 aaKnown RBP30.69■■■□□ 2.5
SRRM2-229ENST00000576894 RAD54L2Q9Y4B4 1467 aa30.67■■■□□ 2.5
SRRM2-229ENST00000576894 DHX57Q6P158 1386 aaKnown RBP30.67■■■□□ 2.5
SRRM2-229ENST00000576894 CCNB3Q8WWL7 1395 aa30.66■■■□□ 2.5
SRRM2-229ENST00000576894 TIAM1Q13009 1591 aa30.66■■■□□ 2.5
SRRM2-229ENST00000576894 LAMC3Q9Y6N6 1575 aa30.62■■■□□ 2.49
SRRM2-229ENST00000576894 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
SRRM2-229ENST00000576894 ACIN1Q9UKV3 1341 aaKnown RBP30.58■■■□□ 2.49
SRRM2-229ENST00000576894 CUL7Q14999 1698 aa30.56■■■□□ 2.48
SRRM2-229ENST00000576894 DNAJC5BQ9UF47 199 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms