RNA–Protein interactions for RNA: ENST00000583858.5

ACADVL-237, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 5

Gene ACADVL, Length 1,015 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-237ENST00000583858 NISCHQ9Y2I1 1504 aa44.24■■■■■ 4.67
ACADVL-237ENST00000583858 CCDC180Q9P1Z9 1646 aa39.06■■■■□ 3.84
ACADVL-237ENST00000583858 ABCC9O60706 1549 aa38.14■■■■□ 3.7
ACADVL-237ENST00000583858 DCAF8L2P0C7V8 631 aa37.1■■■■□ 3.53
ACADVL-237ENST00000583858 ZCCHC6Q5VYS8 1495 aaKnown RBP36.87■■■■□ 3.49
ACADVL-237ENST00000583858 NACADO15069 1562 aa36.79■■■■□ 3.48
ACADVL-237ENST00000583858 RB1CC1Q8TDY2 1594 aa36.74■■■■□ 3.47
ACADVL-237ENST00000583858 MYO15BQ96JP2 1530 aa36.64■■■■□ 3.46
ACADVL-237ENST00000583858 DCAF1Q9Y4B6 1507 aa36.59■■■■□ 3.45
ACADVL-237ENST00000583858 PABPN1Q86U42 306 aaKnown RBP eCLIP35.81■■■■□ 3.325e-9■■■■■ 34.2
ACADVL-237ENST00000583858 SCRIBQ14160 1630 aa35.74■■■■□ 3.31
ACADVL-237ENST00000583858 UNC13AQ9UPW8 1703 aa35.73■■■■□ 3.31
ACADVL-237ENST00000583858 BICRAQ9NZM4 1560 aa35.58■■■■□ 3.29
ACADVL-237ENST00000583858 SHROOM4Q9ULL8 1493 aa35.26■■■■□ 3.23
ACADVL-237ENST00000583858 DNAJC5BQ9UF47 199 aa34.86■■■■□ 3.17
ACADVL-237ENST00000583858 EIF4G1Q04637 1599 aaKnown RBP34.65■■■■□ 3.14
ACADVL-237ENST00000583858 CECR2Q9BXF3 1484 aa34.46■■■■□ 3.11
ACADVL-237ENST00000583858 CC2D2AQ9P2K1 1620 aa34.44■■■■□ 3.1
ACADVL-237ENST00000583858 BAZ1AQ9NRL2 1556 aaPredicted RBP34.25■■■■□ 3.07
ACADVL-237ENST00000583858 SMARCA4P51532 1647 aa34.19■■■■□ 3.06
ACADVL-237ENST00000583858 MROH2BQ7Z745 1585 aa34.09■■■■□ 3.05
ACADVL-237ENST00000583858 ATAD2BQ9ULI0 1458 aa34.05■■■■□ 3.04
ACADVL-237ENST00000583858 NCAPD3P42695 1498 aa34.01■■■■□ 3.03
ACADVL-237ENST00000583858 SMARCA2P51531 1590 aa33.98■■■■□ 3.03
ACADVL-237ENST00000583858 RSF1Q96T23 1441 aaPredicted RBP33.87■■■■□ 3.01
ACADVL-237ENST00000583858 PEG3Q9GZU2 1588 aa33.86■■■■□ 3.01
ACADVL-237ENST00000583858 BAZ1BQ9UIG0 1483 aaKnown RBP33.77■■■■□ 3
ACADVL-237ENST00000583858 HMGXB3Q12766 1538 aa33.76■■■■□ 3
ACADVL-237ENST00000583858 WIZO95785 1651 aa33.68■■■□□ 2.98
ACADVL-237ENST00000583858 TOP2AP11388 1531 aaKnown RBP33.36■■■□□ 2.93
ACADVL-237ENST00000583858 SUPT5HO00267 1087 aaKnown RBP33.35■■■□□ 2.93
ACADVL-237ENST00000583858 CADPSQ9ULU8 1353 aa33.08■■■□□ 2.89
ACADVL-237ENST00000583858 NESP48681 1621 aa33.06■■■□□ 2.88
ACADVL-237ENST00000583858 CCDC88BA6NC98 1476 aa33.05■■■□□ 2.88
ACADVL-237ENST00000583858 LAMC3Q9Y6N6 1575 aa32.98■■■□□ 2.87
ACADVL-237ENST00000583858 CFTRP13569 1480 aa32.87■■■□□ 2.85
ACADVL-237ENST00000583858 ERCC6Q03468 1493 aa32.87■■■□□ 2.85
ACADVL-237ENST00000583858 PDS5BQ9NTI5 1447 aa32.87■■■□□ 2.85
ACADVL-237ENST00000583858 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
ACADVL-237ENST00000583858 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
ACADVL-237ENST00000583858 KIF21AQ7Z4S6 1674 aa32.53■■■□□ 2.8
ACADVL-237ENST00000583858 MRC2Q9UBG0 1479 aa32.44■■■□□ 2.78
ACADVL-237ENST00000583858 PRDM2Q13029 1718 aa32.4■■■□□ 2.78
ACADVL-237ENST00000583858 CUX2O14529 1486 aa32.39■■■□□ 2.78
ACADVL-237ENST00000583858 THOC2Q8NI27 1593 aaKnown RBP32.37■■■□□ 2.77
ACADVL-237ENST00000583858 WDR62O43379 1518 aa32.26■■■□□ 2.76
ACADVL-237ENST00000583858 URB2Q14146 1524 aaKnown RBP32.26■■■□□ 2.75
ACADVL-237ENST00000583858 ABCC8Q09428 1581 aa32.19■■■□□ 2.74
ACADVL-237ENST00000583858 TOPBP1Q92547 1522 aa32.11■■■□□ 2.73
ACADVL-237ENST00000583858 DNMBPQ6XZF7 1577 aa32.06■■■□□ 2.72
ACADVL-237ENST00000583858 CUX1P39880 1505 aa31.96■■■□□ 2.71
ACADVL-237ENST00000583858 WRNQ14191 1432 aaPredicted RBP eCLIP31.92■■■□□ 2.7
ACADVL-237ENST00000583858 IFT140Q96RY7 1462 aa31.88■■■□□ 2.69
ACADVL-237ENST00000583858 POLA1P09884 1462 aaPredicted RBP31.85■■■□□ 2.69
ACADVL-237ENST00000583858 SOGA1O94964 1423 aa31.83■■■□□ 2.69
ACADVL-237ENST00000583858 FGD5Q6ZNL6 1462 aa31.82■■■□□ 2.68
ACADVL-237ENST00000583858 RAD54L2Q9Y4B4 1467 aa31.76■■■□□ 2.67
ACADVL-237ENST00000583858 TOP2BQ02880 1626 aa31.72■■■□□ 2.67
ACADVL-237ENST00000583858 SYNJ1O43426 1573 aa31.72■■■□□ 2.67
ACADVL-237ENST00000583858 ZNF608Q9ULD9 1512 aaPredicted RBP31.69■■■□□ 2.66
ACADVL-237ENST00000583858 TARBP1Q13395 1621 aaKnown RBP31.67■■■□□ 2.66
ACADVL-237ENST00000583858 BIVM-ERCC5R4GMW8 1640 aa31.66■■■□□ 2.66
ACADVL-237ENST00000583858 TDRD9Q8NDG6 1382 aaKnown RBP31.62■■■□□ 2.65
ACADVL-237ENST00000583858 AQRO60306 1485 aaKnown RBP eCLIP31.6■■■□□ 2.653e-6■■■□□ 18.3
ACADVL-237ENST00000583858 DNAJC5Q9H3Z4 198 aa31.54■■■□□ 2.64
ACADVL-237ENST00000583858 ABCA10Q8WWZ4 1543 aa31.54■■■□□ 2.64
ACADVL-237ENST00000583858 TRIM41Q8WV44 630 aa31.5■■■□□ 2.63
ACADVL-237ENST00000583858 EIF4G3O43432 1585 aaKnown RBP31.47■■■□□ 2.63
ACADVL-237ENST00000583858 WDR97A6NE52 1622 aa31.43■■■□□ 2.62
ACADVL-237ENST00000583858 GAPVD1Q14C86 1478 aa31.42■■■□□ 2.62
ACADVL-237ENST00000583858 GRIN2BQ13224 1484 aa31.37■■■□□ 2.61
ACADVL-237ENST00000583858 FBLN2P98095 1184 aa31.29■■■□□ 2.6
ACADVL-237ENST00000583858 ABCA5Q8WWZ7 1642 aa31.28■■■□□ 2.6
ACADVL-237ENST00000583858 CHIC1Q5VXU3 224 aa31.27■■■□□ 2.6
ACADVL-237ENST00000583858 OSCARQ8IYS5 282 aa31.27■■■□□ 2.6
ACADVL-237ENST00000583858 KIF27Q86VH2 1401 aa31.26■■■□□ 2.6
ACADVL-237ENST00000583858 SNAPC4Q5SXM2 1469 aa31.26■■■□□ 2.59
ACADVL-237ENST00000583858 MAGI1Q96QZ7 1491 aaPredicted RBP31.23■■■□□ 2.59
ACADVL-237ENST00000583858 CHMP7Q8WUX9 453 aaPredicted RBP31.23■■■□□ 2.59
ACADVL-237ENST00000583858 ERICH3Q5RHP9 1530 aa31.15■■■□□ 2.58
ACADVL-237ENST00000583858 IGF1RP08069 1367 aa31.15■■■□□ 2.58
ACADVL-237ENST00000583858 PBRM1Q86U86 1689 aa31.14■■■□□ 2.58
ACADVL-237ENST00000583858 SYNJ2O15056 1496 aa31.12■■■□□ 2.57
ACADVL-237ENST00000583858 FHAD1B1AJZ9 1412 aa31.08■■■□□ 2.57
ACADVL-237ENST00000583858 RUSC2Q8N2Y8 1516 aa31.02■■■□□ 2.56
ACADVL-237ENST00000583858 ADAMTS12P58397 1594 aa30.98■■■□□ 2.55
ACADVL-237ENST00000583858 CHD1O14646 1710 aa30.98■■■□□ 2.55
ACADVL-237ENST00000583858 CARMIL1Q5VZK9 1371 aa30.96■■■□□ 2.55
ACADVL-237ENST00000583858 GRIN2AQ12879 1464 aa30.94■■■□□ 2.54
ACADVL-237ENST00000583858 CSRNP3Q8WYN3 585 aa30.87■■■□□ 2.53
ACADVL-237ENST00000583858 CUL7Q14999 1698 aa30.84■■■□□ 2.53
ACADVL-237ENST00000583858 EEA1Q15075 1411 aa30.84■■■□□ 2.53
ACADVL-237ENST00000583858 FAM9AQ8IZU1 332 aaPredicted RBP30.83■■■□□ 2.53
ACADVL-237ENST00000583858 NUP160Q12769 1436 aa30.8■■■□□ 2.52
ACADVL-237ENST00000583858 RAPGEF2Q9Y4G8 1499 aa30.76■■■□□ 2.51
ACADVL-237ENST00000583858 CLASP1Q7Z460 1538 aa30.73■■■□□ 2.51
ACADVL-237ENST00000583858 CEP170Q5SW79 1584 aa30.71■■■□□ 2.51
ACADVL-237ENST00000583858 PRXQ9BXM0 1461 aa30.69■■■□□ 2.5
ACADVL-237ENST00000583858 JPH4Q96JJ6 628 aa30.64■■■□□ 2.5
ACADVL-237ENST00000583858 KIAA0586Q9BVV6 1533 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms