RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 NISCHQ9Y2I1 1504 aa25.11■■□□□ 1.61
ABCD4-201ENST00000356924 CCDC180Q9P1Z9 1646 aa21.89■■□□□ 1.1
ABCD4-201ENST00000356924 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
ABCD4-201ENST00000356924 DCAF1Q9Y4B6 1507 aa20.76■□□□□ 0.91
ABCD4-201ENST00000356924 DCAF8L2P0C7V8 631 aa20.65■□□□□ 0.9
ABCD4-201ENST00000356924 ABCC9O60706 1549 aa20.64■□□□□ 0.9
ABCD4-201ENST00000356924 SHROOM4Q9ULL8 1493 aa20.5■□□□□ 0.87
ABCD4-201ENST00000356924 MYO15BQ96JP2 1530 aa20.49■□□□□ 0.87
ABCD4-201ENST00000356924 NACADO15069 1562 aa20.36■□□□□ 0.85
ABCD4-201ENST00000356924 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
ABCD4-201ENST00000356924 SCRIBQ14160 1630 aa20.14■□□□□ 0.81
ABCD4-201ENST00000356924 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
ABCD4-201ENST00000356924 SUPT5HO00267 1087 aaKnown RBP19.71■□□□□ 0.75
ABCD4-201ENST00000356924 BICRAQ9NZM4 1560 aa19.62■□□□□ 0.73
ABCD4-201ENST00000356924 CECR2Q9BXF3 1484 aa19.54■□□□□ 0.72
ABCD4-201ENST00000356924 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
ABCD4-201ENST00000356924 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.712e-6■■□□□ 13
ABCD4-201ENST00000356924 MROH2BQ7Z745 1585 aa19.43■□□□□ 0.7
ABCD4-201ENST00000356924 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
ABCD4-201ENST00000356924 SMARCA4P51532 1647 aa19.31■□□□□ 0.68
ABCD4-201ENST00000356924 WIZO95785 1651 aa19.29■□□□□ 0.68
ABCD4-201ENST00000356924 PEG3Q9GZU2 1588 aa19.07■□□□□ 0.64
ABCD4-201ENST00000356924 TOP2AP11388 1531 aaKnown RBP19.06■□□□□ 0.64
ABCD4-201ENST00000356924 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
ABCD4-201ENST00000356924 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
ABCD4-201ENST00000356924 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
ABCD4-201ENST00000356924 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
ABCD4-201ENST00000356924 CCDC88BA6NC98 1476 aa18.87■□□□□ 0.61
ABCD4-201ENST00000356924 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
ABCD4-201ENST00000356924 NCAPD3P42695 1498 aa18.79■□□□□ 0.6
ABCD4-201ENST00000356924 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
ABCD4-201ENST00000356924 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
ABCD4-201ENST00000356924 TRIM41Q8WV44 630 aa18.52■□□□□ 0.55
ABCD4-201ENST00000356924 ABCC8Q09428 1581 aa18.49■□□□□ 0.55
ABCD4-201ENST00000356924 CFTRP13569 1480 aa18.38■□□□□ 0.53
ABCD4-201ENST00000356924 PRDM2Q13029 1718 aa18.34■□□□□ 0.53
ABCD4-201ENST00000356924 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
ABCD4-201ENST00000356924 SYNJ1O43426 1573 aa18.3■□□□□ 0.52
ABCD4-201ENST00000356924 CADPSQ9ULU8 1353 aa18.29■□□□□ 0.52
ABCD4-201ENST00000356924 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
ABCD4-201ENST00000356924 LOC105371045A0A1W2PR82 267 aa18.21■□□□□ 0.51
ABCD4-201ENST00000356924 BIVM-ERCC5R4GMW8 1640 aa18.21■□□□□ 0.51
ABCD4-201ENST00000356924 TOP2BQ02880 1626 aa18.21■□□□□ 0.5
ABCD4-201ENST00000356924 FAM9AQ8IZU1 332 aaPredicted RBP18.2■□□□□ 0.5
ABCD4-201ENST00000356924 NESP48681 1621 aa18.17■□□□□ 0.5
ABCD4-201ENST00000356924 CUX1P39880 1505 aa18.16■□□□□ 0.5
ABCD4-201ENST00000356924 LAMC3Q9Y6N6 1575 aa18.14■□□□□ 0.49
ABCD4-201ENST00000356924 SOGA1O94964 1423 aa18.14■□□□□ 0.49
ABCD4-201ENST00000356924 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
ABCD4-201ENST00000356924 RUSC2Q8N2Y8 1516 aa18.1■□□□□ 0.49
ABCD4-201ENST00000356924 EEA1Q15075 1411 aa18.06■□□□□ 0.48
ABCD4-201ENST00000356924 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
ABCD4-201ENST00000356924 CSRNP3Q8WYN3 585 aa17.97■□□□□ 0.47
ABCD4-201ENST00000356924 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.47
ABCD4-201ENST00000356924 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
ABCD4-201ENST00000356924 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
ABCD4-201ENST00000356924 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
ABCD4-201ENST00000356924 FGD5Q6ZNL6 1462 aa17.93■□□□□ 0.46
ABCD4-201ENST00000356924 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
ABCD4-201ENST00000356924 URB2Q14146 1524 aaKnown RBP17.91■□□□□ 0.46
ABCD4-201ENST00000356924 KIF21BO75037 1637 aa17.88■□□□□ 0.45
ABCD4-201ENST00000356924 POLA1P09884 1462 aaPredicted RBP17.84■□□□□ 0.45
ABCD4-201ENST00000356924 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
ABCD4-201ENST00000356924 GOLGA3Q08378 1498 aa17.84■□□□□ 0.45
ABCD4-201ENST00000356924 CUX2O14529 1486 aa17.81■□□□□ 0.44
ABCD4-201ENST00000356924 RAD54L2Q9Y4B4 1467 aa17.8■□□□□ 0.44
ABCD4-201ENST00000356924 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
ABCD4-201ENST00000356924 PRXQ9BXM0 1461 aa17.78■□□□□ 0.44
ABCD4-201ENST00000356924 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.44
ABCD4-201ENST00000356924 WDR97A6NE52 1622 aa17.77■□□□□ 0.43
ABCD4-201ENST00000356924 MRC2Q9UBG0 1479 aa17.77■□□□□ 0.43
ABCD4-201ENST00000356924 RAPGEF2Q9Y4G8 1499 aa17.77■□□□□ 0.43
ABCD4-201ENST00000356924 ERICH3Q5RHP9 1530 aa17.74■□□□□ 0.43
ABCD4-201ENST00000356924 IGF1RP08069 1367 aa17.71■□□□□ 0.43
ABCD4-201ENST00000356924 UBTFP17480 764 aaKnown RBP17.71■□□□□ 0.43
ABCD4-201ENST00000356924 CEP162Q5TB80 1403 aa17.7■□□□□ 0.42
ABCD4-201ENST00000356924 WDR62O43379 1518 aa17.69■□□□□ 0.42
ABCD4-201ENST00000356924 TARBP1Q13395 1621 aaKnown RBP17.68■□□□□ 0.42
ABCD4-201ENST00000356924 ABCA5Q8WWZ7 1642 aa17.66■□□□□ 0.42
ABCD4-201ENST00000356924 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
ABCD4-201ENST00000356924 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
ABCD4-201ENST00000356924 CARMIL1Q5VZK9 1371 aa17.61■□□□□ 0.41
ABCD4-201ENST00000356924 HRCP23327 699 aa17.6■□□□□ 0.41
ABCD4-201ENST00000356924 TDRD9Q8NDG6 1382 aaKnown RBP17.59■□□□□ 0.41
ABCD4-201ENST00000356924 CUL7Q14999 1698 aa17.58■□□□□ 0.4
ABCD4-201ENST00000356924 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
ABCD4-201ENST00000356924 CLIP1P30622 1438 aa17.55■□□□□ 0.4
ABCD4-201ENST00000356924 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
ABCD4-201ENST00000356924 PBRM1Q86U86 1689 aa17.52■□□□□ 0.4
ABCD4-201ENST00000356924 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.393e-8■■■■■ 28.1
ABCD4-201ENST00000356924 ZNF608Q9ULD9 1512 aaPredicted RBP17.48■□□□□ 0.39
ABCD4-201ENST00000356924 RANGAP1P46060 587 aaPredicted RBP17.43■□□□□ 0.38
ABCD4-201ENST00000356924 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
ABCD4-201ENST00000356924 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
ABCD4-201ENST00000356924 GRIN2BQ13224 1484 aa17.42■□□□□ 0.38
ABCD4-201ENST00000356924 PPARGC1BQ86YN6 1023 aaKnown RBP17.42■□□□□ 0.38
ABCD4-201ENST00000356924 ADAMTS12P58397 1594 aa17.42■□□□□ 0.38
ABCD4-201ENST00000356924 CTTNBP2Q8WZ74 1663 aa17.41■□□□□ 0.38
ABCD4-201ENST00000356924 VPS8Q8N3P4 1428 aa17.41■□□□□ 0.38
ABCD4-201ENST00000356924 ARHGAP35Q9NRY4 1499 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms