RNA–Protein interactions for RNA: ENST00000350303.9

ACADVL-202, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 1 (best) BASIC

Gene ACADVL, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-202ENST00000350303 NISCHQ9Y2I1 1504 aa44.79■■■■■ 4.76
ACADVL-202ENST00000350303 CCDC180Q9P1Z9 1646 aa38.39■■■■□ 3.74
ACADVL-202ENST00000350303 ZCCHC6Q5VYS8 1495 aaKnown RBP37.79■■■■□ 3.64
ACADVL-202ENST00000350303 SHROOM4Q9ULL8 1493 aa37.64■■■■□ 3.62
ACADVL-202ENST00000350303 DCAF8L2P0C7V8 631 aa37.18■■■■□ 3.54
ACADVL-202ENST00000350303 DCAF1Q9Y4B6 1507 aa36.83■■■■□ 3.49
ACADVL-202ENST00000350303 SUPT5HO00267 1087 aaKnown RBP36.67■■■■□ 3.46
ACADVL-202ENST00000350303 MYO15BQ96JP2 1530 aa36■■■■□ 3.35
ACADVL-202ENST00000350303 ABCC9O60706 1549 aa35.94■■■■□ 3.34
ACADVL-202ENST00000350303 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
ACADVL-202ENST00000350303 NACADO15069 1562 aa35.63■■■■□ 3.29
ACADVL-202ENST00000350303 CHIC1Q5VXU3 224 aa35.42■■■■□ 3.26
ACADVL-202ENST00000350303 RSF1Q96T23 1441 aaPredicted RBP35.2■■■■□ 3.23
ACADVL-202ENST00000350303 RB1CC1Q8TDY2 1594 aa35.15■■■■□ 3.22
ACADVL-202ENST00000350303 CECR2Q9BXF3 1484 aa34.91■■■■□ 3.18
ACADVL-202ENST00000350303 MROH2BQ7Z745 1585 aa34.75■■■■□ 3.15
ACADVL-202ENST00000350303 UNC13AQ9UPW8 1703 aa34.52■■■■□ 3.12
ACADVL-202ENST00000350303 WIZO95785 1651 aa34.51■■■■□ 3.12
ACADVL-202ENST00000350303 BAZ1AQ9NRL2 1556 aaPredicted RBP34.47■■■■□ 3.11
ACADVL-202ENST00000350303 LOC105371045A0A1W2PR82 267 aa34.29■■■■□ 3.08
ACADVL-202ENST00000350303 TRIM41Q8WV44 630 aa34.26■■■■□ 3.08
ACADVL-202ENST00000350303 PABPN1Q86U42 306 aaKnown RBP eCLIP34.23■■■■□ 3.075e-9■■■■■ 34.2
ACADVL-202ENST00000350303 SMARCA4P51532 1647 aa34.22■■■■□ 3.07
ACADVL-202ENST00000350303 BICRAQ9NZM4 1560 aa34.16■■■■□ 3.06
ACADVL-202ENST00000350303 TOP2AP11388 1531 aaKnown RBP34.04■■■■□ 3.04
ACADVL-202ENST00000350303 FAM9AQ8IZU1 332 aaPredicted RBP33.88■■■■□ 3.01
ACADVL-202ENST00000350303 CCDC88BA6NC98 1476 aa33.85■■■■□ 3.01
ACADVL-202ENST00000350303 EIF4G1Q04637 1599 aaKnown RBP33.84■■■■□ 3.01
ACADVL-202ENST00000350303 SMARCA2P51531 1590 aa33.81■■■■□ 3
ACADVL-202ENST00000350303 PCGF6Q9BYE7 350 aa33.7■■■□□ 2.98
ACADVL-202ENST00000350303 PEG3Q9GZU2 1588 aa33.63■■■□□ 2.97
ACADVL-202ENST00000350303 EHMT2Q96KQ7 1210 aa33.54■■■□□ 2.96
ACADVL-202ENST00000350303 ABCC8Q09428 1581 aa33.52■■■□□ 2.96
ACADVL-202ENST00000350303 ATAD2BQ9ULI0 1458 aa33.49■■■□□ 2.95
ACADVL-202ENST00000350303 BAZ1BQ9UIG0 1483 aaKnown RBP33.37■■■□□ 2.93
ACADVL-202ENST00000350303 HRCP23327 699 aa33.33■■■□□ 2.93
ACADVL-202ENST00000350303 TRIM26Q12899 539 aaPredicted RBP33.26■■■□□ 2.92
ACADVL-202ENST00000350303 SOGA1O94964 1423 aa33.12■■■□□ 2.89
ACADVL-202ENST00000350303 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.89
ACADVL-202ENST00000350303 NCAPD3P42695 1498 aa32.97■■■□□ 2.87
ACADVL-202ENST00000350303 RUSC2Q8N2Y8 1516 aa32.96■■■□□ 2.87
ACADVL-202ENST00000350303 EEA1Q15075 1411 aa32.95■■■□□ 2.87
ACADVL-202ENST00000350303 CSRNP3Q8WYN3 585 aa32.92■■■□□ 2.86
ACADVL-202ENST00000350303 HMGXB3Q12766 1538 aa32.92■■■□□ 2.86
ACADVL-202ENST00000350303 SYNJ1O43426 1573 aa32.92■■■□□ 2.86
ACADVL-202ENST00000350303 TNIKQ9UKE5 1360 aa32.75■■■□□ 2.83
ACADVL-202ENST00000350303 PPARGC1BQ86YN6 1023 aaKnown RBP32.73■■■□□ 2.83
ACADVL-202ENST00000350303 CEP162Q5TB80 1403 aa32.72■■■□□ 2.83
ACADVL-202ENST00000350303 UBTFP17480 764 aaKnown RBP32.71■■■□□ 2.83
ACADVL-202ENST00000350303 GOLGA3Q08378 1498 aa32.67■■■□□ 2.82
ACADVL-202ENST00000350303 TOP2BQ02880 1626 aa32.61■■■□□ 2.81
ACADVL-202ENST00000350303 CEP164Q9UPV0 1460 aa32.55■■■□□ 2.8
ACADVL-202ENST00000350303 CFTRP13569 1480 aa32.53■■■□□ 2.8
ACADVL-202ENST00000350303 BIVM-ERCC5R4GMW8 1640 aa32.5■■■□□ 2.79
ACADVL-202ENST00000350303 KIF21BO75037 1637 aa32.49■■■□□ 2.79
ACADVL-202ENST00000350303 CUX1P39880 1505 aa32.4■■■□□ 2.78
ACADVL-202ENST00000350303 CC2D2AQ9P2K1 1620 aa32.39■■■□□ 2.78
ACADVL-202ENST00000350303 RAPGEF2Q9Y4G8 1499 aa32.35■■■□□ 2.77
ACADVL-202ENST00000350303 TTBK1Q5TCY1 1321 aaPredicted RBP32.32■■■□□ 2.76
ACADVL-202ENST00000350303 ZEB1P37275 1124 aaPredicted RBP32.31■■■□□ 2.76
ACADVL-202ENST00000350303 CADPSQ9ULU8 1353 aa32.28■■■□□ 2.76
ACADVL-202ENST00000350303 CLIP1P30622 1438 aa32.25■■■□□ 2.75
ACADVL-202ENST00000350303 PRDM2Q13029 1718 aa32.2■■■□□ 2.75
ACADVL-202ENST00000350303 KIF27Q86VH2 1401 aa32.15■■■□□ 2.74
ACADVL-202ENST00000350303 PRXQ9BXM0 1461 aa32.14■■■□□ 2.74
ACADVL-202ENST00000350303 RANGAP1P46060 587 aaPredicted RBP32.13■■■□□ 2.73
ACADVL-202ENST00000350303 ERICH3Q5RHP9 1530 aa32.09■■■□□ 2.73
ACADVL-202ENST00000350303 VPS8Q8N3P4 1428 aa32.05■■■□□ 2.72
ACADVL-202ENST00000350303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.99■■■□□ 2.71
ACADVL-202ENST00000350303 FANCD2Q9BXW9 1451 aa31.95■■■□□ 2.71
ACADVL-202ENST00000350303 CUX2O14529 1486 aa31.93■■■□□ 2.7
ACADVL-202ENST00000350303 FGD5Q6ZNL6 1462 aa31.92■■■□□ 2.7
ACADVL-202ENST00000350303 CCER1Q8TC90 406 aaPredicted RBP31.91■■■□□ 2.7
ACADVL-202ENST00000350303 APLP2Q06481 763 aa31.88■■■□□ 2.69
ACADVL-202ENST00000350303 NESP48681 1621 aa31.84■■■□□ 2.69
ACADVL-202ENST00000350303 IGF1RP08069 1367 aa31.83■■■□□ 2.69
ACADVL-202ENST00000350303 ARAP1Q96P48 1450 aa31.79■■■□□ 2.68
ACADVL-202ENST00000350303 DNMBPQ6XZF7 1577 aa31.72■■■□□ 2.67
ACADVL-202ENST00000350303 CARMIL1Q5VZK9 1371 aa31.69■■■□□ 2.66
ACADVL-202ENST00000350303 TOPBP1Q92547 1522 aa31.68■■■□□ 2.66
ACADVL-202ENST00000350303 RAD54L2Q9Y4B4 1467 aa31.64■■■□□ 2.66
ACADVL-202ENST00000350303 LAMC3Q9Y6N6 1575 aa31.64■■■□□ 2.66
ACADVL-202ENST00000350303 DNAJC5BQ9UF47 199 aa31.64■■■□□ 2.66
ACADVL-202ENST00000350303 POLA1P09884 1462 aaPredicted RBP31.62■■■□□ 2.65
ACADVL-202ENST00000350303 ARHGAP35Q9NRY4 1499 aa31.62■■■□□ 2.65
ACADVL-202ENST00000350303 HNRNPUL2Q1KMD3 747 aaKnown RBP31.6■■■□□ 2.65
ACADVL-202ENST00000350303 ABCA10Q8WWZ4 1543 aa31.57■■■□□ 2.64
ACADVL-202ENST00000350303 KANK4Q5T7N3 995 aaPredicted RBP31.51■■■□□ 2.63
ACADVL-202ENST00000350303 URB2Q14146 1524 aaKnown RBP31.5■■■□□ 2.63
ACADVL-202ENST00000350303 PDS5BQ9NTI5 1447 aa31.47■■■□□ 2.63
ACADVL-202ENST00000350303 CUL7Q14999 1698 aa31.3■■■□□ 2.6
ACADVL-202ENST00000350303 TDRD9Q8NDG6 1382 aaKnown RBP31.29■■■□□ 2.6
ACADVL-202ENST00000350303 KIF21AQ7Z4S6 1674 aa31.29■■■□□ 2.6
ACADVL-202ENST00000350303 WDR97A6NE52 1622 aa31.29■■■□□ 2.6
ACADVL-202ENST00000350303 P3H3Q8IVL6 736 aa31.27■■■□□ 2.6
ACADVL-202ENST00000350303 RRBP1Q9P2E9 1410 aaKnown RBP31.21■■■□□ 2.59
ACADVL-202ENST00000350303 GAPVD1Q14C86 1478 aa31.2■■■□□ 2.58
ACADVL-202ENST00000350303 ABCA5Q8WWZ7 1642 aa31.2■■■□□ 2.58
ACADVL-202ENST00000350303 FHAD1B1AJZ9 1412 aa31.19■■■□□ 2.58
ACADVL-202ENST00000350303 TIAM1Q13009 1591 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms