RNA–Protein interactions for RNA: ENST00000457378.6

SUN1-220, Transcript of Sad1 and UNC84 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SUN1, Length 1,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUN1-220ENST00000457378 NISCHQ9Y2I1 1504 aa47.5■■■■■ 5.19
SUN1-220ENST00000457378 CCDC180Q9P1Z9 1646 aa41.9■■■■■ 4.3
SUN1-220ENST00000457378 ABCC9O60706 1549 aa40.36■■■■■ 4.05
SUN1-220ENST00000457378 ZCCHC6Q5VYS8 1495 aaKnown RBP39.69■■■■□ 3.94
SUN1-220ENST00000457378 DCAF8L2P0C7V8 631 aa39.48■■■■□ 3.91
SUN1-220ENST00000457378 DCAF1Q9Y4B6 1507 aa39.37■■■■□ 3.89
SUN1-220ENST00000457378 MYO15BQ96JP2 1530 aa39.31■■■■□ 3.88
SUN1-220ENST00000457378 NACADO15069 1562 aa39.29■■■■□ 3.88
SUN1-220ENST00000457378 RB1CC1Q8TDY2 1594 aa39.16■■■■□ 3.86
SUN1-220ENST00000457378 SCRIBQ14160 1630 aa38.26■■■■□ 3.71
SUN1-220ENST00000457378 UNC13AQ9UPW8 1703 aa38.15■■■■□ 3.7
SUN1-220ENST00000457378 SHROOM4Q9ULL8 1493 aa37.9■■■■□ 3.66
SUN1-220ENST00000457378 BICRAQ9NZM4 1560 aa37.87■■■■□ 3.65
SUN1-220ENST00000457378 PABPN1Q86U42 306 aaKnown RBP eCLIP37.87■■■■□ 3.65
SUN1-220ENST00000457378 CECR2Q9BXF3 1484 aa36.9■■■■□ 3.5
SUN1-220ENST00000457378 EIF4G1Q04637 1599 aaKnown RBP36.85■■■■□ 3.49
SUN1-220ENST00000457378 BAZ1AQ9NRL2 1556 aaPredicted RBP36.79■■■■□ 3.48
SUN1-220ENST00000457378 SMARCA4P51532 1647 aa36.68■■■■□ 3.46
SUN1-220ENST00000457378 MROH2BQ7Z745 1585 aa36.59■■■■□ 3.45
SUN1-220ENST00000457378 CC2D2AQ9P2K1 1620 aa36.53■■■■□ 3.44
SUN1-220ENST00000457378 RSF1Q96T23 1441 aaPredicted RBP36.45■■■■□ 3.43
SUN1-220ENST00000457378 DNAJC5BQ9UF47 199 aa36.44■■■■□ 3.42
SUN1-220ENST00000457378 SMARCA2P51531 1590 aa36.36■■■■□ 3.41
SUN1-220ENST00000457378 ATAD2BQ9ULI0 1458 aa36.36■■■■□ 3.41
SUN1-220ENST00000457378 PEG3Q9GZU2 1588 aa36.34■■■■□ 3.41
SUN1-220ENST00000457378 NCAPD3P42695 1498 aa36.26■■■■□ 3.39
SUN1-220ENST00000457378 WIZO95785 1651 aa36.2■■■■□ 3.39
SUN1-220ENST00000457378 HMGXB3Q12766 1538 aa36.11■■■■□ 3.37
SUN1-220ENST00000457378 BAZ1BQ9UIG0 1483 aaKnown RBP36.1■■■■□ 3.37
SUN1-220ENST00000457378 SUPT5HO00267 1087 aaKnown RBP36.07■■■■□ 3.36
SUN1-220ENST00000457378 TOP2AP11388 1531 aaKnown RBP35.9■■■■□ 3.34
SUN1-220ENST00000457378 CCDC88BA6NC98 1476 aa35.49■■■■□ 3.27
SUN1-220ENST00000457378 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
SUN1-220ENST00000457378 LAMC3Q9Y6N6 1575 aa35.17■■■■□ 3.22
SUN1-220ENST00000457378 CFTRP13569 1480 aa35.16■■■■□ 3.22
SUN1-220ENST00000457378 NESP48681 1621 aa35.1■■■■□ 3.21
SUN1-220ENST00000457378 PDS5BQ9NTI5 1447 aa34.96■■■■□ 3.19
SUN1-220ENST00000457378 PRDM2Q13029 1718 aa34.85■■■■□ 3.17
SUN1-220ENST00000457378 FANCD2Q9BXW9 1451 aa34.81■■■■□ 3.16
SUN1-220ENST00000457378 ERCC6Q03468 1493 aa34.78■■■■□ 3.16
SUN1-220ENST00000457378 CEP164Q9UPV0 1460 aa34.7■■■■□ 3.15
SUN1-220ENST00000457378 KIF21AQ7Z4S6 1674 aa34.67■■■■□ 3.14
SUN1-220ENST00000457378 MRC2Q9UBG0 1479 aa34.51■■■■□ 3.12
SUN1-220ENST00000457378 ABCC8Q09428 1581 aa34.44■■■■□ 3.1
SUN1-220ENST00000457378 THOC2Q8NI27 1593 aaKnown RBP34.41■■■■□ 3.1
SUN1-220ENST00000457378 URB2Q14146 1524 aaKnown RBP34.39■■■■□ 3.1
SUN1-220ENST00000457378 WRNQ14191 1432 aaPredicted RBP eCLIP34.38■■■■□ 3.09
SUN1-220ENST00000457378 WDR62O43379 1518 aa34.35■■■■□ 3.09
SUN1-220ENST00000457378 DNMBPQ6XZF7 1577 aa34.33■■■■□ 3.09
SUN1-220ENST00000457378 TOPBP1Q92547 1522 aa34.32■■■■□ 3.08
SUN1-220ENST00000457378 CUX1P39880 1505 aa34.28■■■■□ 3.08
SUN1-220ENST00000457378 TOP2BQ02880 1626 aa34.19■■■■□ 3.06
SUN1-220ENST00000457378 CUX2O14529 1486 aa34.18■■■■□ 3.06
SUN1-220ENST00000457378 SYNJ1O43426 1573 aa34.17■■■■□ 3.06
SUN1-220ENST00000457378 BIVM-ERCC5R4GMW8 1640 aa34.15■■■■□ 3.06
SUN1-220ENST00000457378 TRIM41Q8WV44 630 aa34.08■■■■□ 3.05
SUN1-220ENST00000457378 FGD5Q6ZNL6 1462 aa34.08■■■■□ 3.05
SUN1-220ENST00000457378 CHIC1Q5VXU3 224 aa34.07■■■■□ 3.05
SUN1-220ENST00000457378 POLA1P09884 1462 aaPredicted RBP34.06■■■■□ 3.04
SUN1-220ENST00000457378 SOGA1O94964 1423 aa33.99■■■■□ 3.03
SUN1-220ENST00000457378 IFT140Q96RY7 1462 aa33.98■■■■□ 3.03
SUN1-220ENST00000457378 RAD54L2Q9Y4B4 1467 aa33.9■■■■□ 3.02
SUN1-220ENST00000457378 TARBP1Q13395 1621 aaKnown RBP33.85■■■■□ 3.01
SUN1-220ENST00000457378 ABCA10Q8WWZ4 1543 aa33.81■■■■□ 3
SUN1-220ENST00000457378 WDR97A6NE52 1622 aa33.7■■■□□ 2.98
SUN1-220ENST00000457378 ZNF608Q9ULD9 1512 aaPredicted RBP33.69■■■□□ 2.98
SUN1-220ENST00000457378 TDRD9Q8NDG6 1382 aaKnown RBP33.69■■■□□ 2.98
SUN1-220ENST00000457378 KIF27Q86VH2 1401 aa33.63■■■□□ 2.97
SUN1-220ENST00000457378 AQRO60306 1485 aaKnown RBP eCLIP33.63■■■□□ 2.975e-8■■■■■ 38.3
SUN1-220ENST00000457378 GAPVD1Q14C86 1478 aa33.6■■■□□ 2.97
SUN1-220ENST00000457378 EIF4G3O43432 1585 aaKnown RBP33.57■■■□□ 2.97
SUN1-220ENST00000457378 ABCA5Q8WWZ7 1642 aa33.56■■■□□ 2.96
SUN1-220ENST00000457378 GRIN2BQ13224 1484 aa33.5■■■□□ 2.95
SUN1-220ENST00000457378 EEA1Q15075 1411 aa33.47■■■□□ 2.95
SUN1-220ENST00000457378 RUSC2Q8N2Y8 1516 aa33.44■■■□□ 2.94
SUN1-220ENST00000457378 ERICH3Q5RHP9 1530 aa33.43■■■□□ 2.94
SUN1-220ENST00000457378 IGF1RP08069 1367 aa33.4■■■□□ 2.94
SUN1-220ENST00000457378 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
SUN1-220ENST00000457378 MAGI1Q96QZ7 1491 aaPredicted RBP33.34■■■□□ 2.93
SUN1-220ENST00000457378 CSRNP3Q8WYN3 585 aa33.32■■■□□ 2.93
SUN1-220ENST00000457378 SNAPC4Q5SXM2 1469 aa33.32■■■□□ 2.92
SUN1-220ENST00000457378 FAM9AQ8IZU1 332 aaPredicted RBP33.29■■■□□ 2.92
SUN1-220ENST00000457378 FHAD1B1AJZ9 1412 aa33.25■■■□□ 2.91
SUN1-220ENST00000457378 CARMIL1Q5VZK9 1371 aa33.23■■■□□ 2.91
SUN1-220ENST00000457378 CUL7Q14999 1698 aa33.22■■■□□ 2.91
SUN1-220ENST00000457378 SYNJ2O15056 1496 aa33.2■■■□□ 2.9
SUN1-220ENST00000457378 ADAMTS12P58397 1594 aa33.19■■■□□ 2.9
SUN1-220ENST00000457378 CHMP7Q8WUX9 453 aaPredicted RBP33.19■■■□□ 2.9
SUN1-220ENST00000457378 FBLN2P98095 1184 aa33.15■■■□□ 2.9
SUN1-220ENST00000457378 PRXQ9BXM0 1461 aa33.12■■■□□ 2.89
SUN1-220ENST00000457378 RAPGEF2Q9Y4G8 1499 aa33.1■■■□□ 2.89
SUN1-220ENST00000457378 GRIN2AQ12879 1464 aa33.05■■■□□ 2.88
SUN1-220ENST00000457378 CHD1O14646 1710 aa32.99■■■□□ 2.87
SUN1-220ENST00000457378 KIF21BO75037 1637 aa32.98■■■□□ 2.87
SUN1-220ENST00000457378 OSCARQ8IYS5 282 aa32.96■■■□□ 2.87
SUN1-220ENST00000457378 NUP160Q12769 1436 aa32.88■■■□□ 2.85
SUN1-220ENST00000457378 GOLGA3Q08378 1498 aa32.87■■■□□ 2.85
SUN1-220ENST00000457378 CEP170Q5SW79 1584 aa32.8■■■□□ 2.84
SUN1-220ENST00000457378 UBTFP17480 764 aaKnown RBP32.78■■■□□ 2.84
SUN1-220ENST00000457378 EHMT2Q96KQ7 1210 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms