RNA–Protein interactions for RNA: ENST00000381989.3

PARP4-201, Transcript of poly(ADP-ribose) polymerase family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP4, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP4-201ENST00000381989 NISCHQ9Y2I1 1504 aa16.13■□□□□ 0.17
PARP4-201ENST00000381989 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
PARP4-201ENST00000381989 FAM9AQ8IZU1 332 aaPredicted RBP13.75□□□□□ -0.21
PARP4-201ENST00000381989 CCDC180Q9P1Z9 1646 aa13.74□□□□□ -0.21
PARP4-201ENST00000381989 ZCCHC6Q5VYS8 1495 aaKnown RBP13.73□□□□□ -0.21
PARP4-201ENST00000381989 SHROOM4Q9ULL8 1493 aa13.49□□□□□ -0.25
PARP4-201ENST00000381989 MYO15BQ96JP2 1530 aa13.37□□□□□ -0.27
PARP4-201ENST00000381989 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
PARP4-201ENST00000381989 DCAF1Q9Y4B6 1507 aa13.28□□□□□ -0.28
PARP4-201ENST00000381989 APLP2Q06481 763 aa13.23□□□□□ -0.29
PARP4-201ENST00000381989 SUPT5HO00267 1087 aaKnown RBP13.06□□□□□ -0.32
PARP4-201ENST00000381989 CHIC1Q5VXU3 224 aa13.01□□□□□ -0.33
PARP4-201ENST00000381989 ABCC9O60706 1549 aa12.98□□□□□ -0.33
PARP4-201ENST00000381989 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
PARP4-201ENST00000381989 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
PARP4-201ENST00000381989 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.36
PARP4-201ENST00000381989 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
PARP4-201ENST00000381989 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
PARP4-201ENST00000381989 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
PARP4-201ENST00000381989 NACADO15069 1562 aa12.7□□□□□ -0.38
PARP4-201ENST00000381989 CECR2Q9BXF3 1484 aa12.67□□□□□ -0.38
PARP4-201ENST00000381989 MROH2BQ7Z745 1585 aa12.63□□□□□ -0.39
PARP4-201ENST00000381989 LOC105371045A0A1W2PR82 267 aa12.62□□□□□ -0.39
PARP4-201ENST00000381989 UNC13AQ9UPW8 1703 aa12.62□□□□□ -0.39
PARP4-201ENST00000381989 WIZO95785 1651 aa12.6□□□□□ -0.39
PARP4-201ENST00000381989 HRCP23327 699 aa12.57□□□□□ -0.4
PARP4-201ENST00000381989 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
PARP4-201ENST00000381989 TRIM41Q8WV44 630 aa12.47□□□□□ -0.41
PARP4-201ENST00000381989 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
PARP4-201ENST00000381989 CENPBP07199 599 aaPredicted RBP12.43□□□□□ -0.42
PARP4-201ENST00000381989 PCGF6Q9BYE7 350 aa12.41□□□□□ -0.42
PARP4-201ENST00000381989 BICRAQ9NZM4 1560 aa12.35□□□□□ -0.43
PARP4-201ENST00000381989 SMARCA4P51532 1647 aa12.31□□□□□ -0.44
PARP4-201ENST00000381989 UBTFP17480 764 aaKnown RBP12.31□□□□□ -0.44
PARP4-201ENST00000381989 SMARCA2P51531 1590 aa12.31□□□□□ -0.44
PARP4-201ENST00000381989 NEFLP07196 543 aa12.29□□□□□ -0.44
PARP4-201ENST00000381989 ERICH6Q7L0X2 663 aa12.28□□□□□ -0.44
PARP4-201ENST00000381989 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
PARP4-201ENST00000381989 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
PARP4-201ENST00000381989 MYT1Q01538 1121 aa12.25□□□□□ -0.45
PARP4-201ENST00000381989 ATP1B4Q9UN42 357 aaPredicted RBP12.22□□□□□ -0.45
PARP4-201ENST00000381989 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
PARP4-201ENST00000381989 TRIM26Q12899 539 aaPredicted RBP12.21□□□□□ -0.45
PARP4-201ENST00000381989 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
PARP4-201ENST00000381989 YTHDC1Q96MU7 727 aaKnown RBP12.17□□□□□ -0.46
PARP4-201ENST00000381989 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
PARP4-201ENST00000381989 MYT1LQ9UL68 1186 aa12.1□□□□□ -0.47
PARP4-201ENST00000381989 ACIN1Q9UKV3 1341 aaKnown RBP12.1□□□□□ -0.47
PARP4-201ENST00000381989 EEA1Q15075 1411 aa12.09□□□□□ -0.47
PARP4-201ENST00000381989 SOGA1O94964 1423 aa12.09□□□□□ -0.47
PARP4-201ENST00000381989 SYNJ1O43426 1573 aa12.06□□□□□ -0.48
PARP4-201ENST00000381989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
PARP4-201ENST00000381989 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
PARP4-201ENST00000381989 WRNQ14191 1432 aaPredicted RBP eCLIP12.01□□□□□ -0.49
PARP4-201ENST00000381989 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
PARP4-201ENST00000381989 DAXXQ9UER7 740 aaPredicted RBP11.99□□□□□ -0.49
PARP4-201ENST00000381989 NEFMP07197 916 aa11.95□□□□□ -0.5
PARP4-201ENST00000381989 CDK11AQ9UQ88 783 aaPredicted RBP11.92□□□□□ -0.5
PARP4-201ENST00000381989 ATAD2BQ9ULI0 1458 aa11.91□□□□□ -0.5
PARP4-201ENST00000381989 CEP162Q5TB80 1403 aa11.9□□□□□ -0.5
PARP4-201ENST00000381989 BAZ1BQ9UIG0 1483 aaKnown RBP11.89□□□□□ -0.51
PARP4-201ENST00000381989 KIF21BO75037 1637 aa11.87□□□□□ -0.51
PARP4-201ENST00000381989 RANGAP1P46060 587 aaPredicted RBP11.86□□□□□ -0.51
PARP4-201ENST00000381989 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
PARP4-201ENST00000381989 PABPN1Q86U42 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
PARP4-201ENST00000381989 TNIKQ9UKE5 1360 aa11.84□□□□□ -0.51
PARP4-201ENST00000381989 GOLGA3Q08378 1498 aa11.83□□□□□ -0.52
PARP4-201ENST00000381989 TOP2BQ02880 1626 aa11.82□□□□□ -0.52
PARP4-201ENST00000381989 CSRNP3Q8WYN3 585 aa11.82□□□□□ -0.52
PARP4-201ENST00000381989 CEP164Q9UPV0 1460 aa11.78□□□□□ -0.52
PARP4-201ENST00000381989 RAPGEF2Q9Y4G8 1499 aa11.78□□□□□ -0.52
PARP4-201ENST00000381989 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
PARP4-201ENST00000381989 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
PARP4-201ENST00000381989 SCAF1Q9H7N4 1312 aaKnown RBP11.75□□□□□ -0.53
PARP4-201ENST00000381989 CUX1P39880 1505 aa11.73□□□□□ -0.53
PARP4-201ENST00000381989 ESF1Q9H501 851 aaKnown RBP11.73□□□□□ -0.53
PARP4-201ENST00000381989 PRXQ9BXM0 1461 aa11.7□□□□□ -0.54
PARP4-201ENST00000381989 TTBK1Q5TCY1 1321 aaPredicted RBP11.7□□□□□ -0.54
PARP4-201ENST00000381989 CLIP1P30622 1438 aa11.69□□□□□ -0.54
PARP4-201ENST00000381989 PRDM2Q13029 1718 aa11.69□□□□□ -0.54
PARP4-201ENST00000381989 HMGXB3Q12766 1538 aa11.68□□□□□ -0.54
PARP4-201ENST00000381989 ARAP1Q96P48 1450 aa11.68□□□□□ -0.54
PARP4-201ENST00000381989 CLSPNQ9HAW4 1339 aa11.65□□□□□ -0.54
PARP4-201ENST00000381989 NCAPD3P42695 1498 aa11.64□□□□□ -0.55
PARP4-201ENST00000381989 KIF27Q86VH2 1401 aa11.62□□□□□ -0.55
PARP4-201ENST00000381989 TRIM52Q96A61 297 aa11.61□□□□□ -0.55
PARP4-201ENST00000381989 ERICH3Q5RHP9 1530 aa11.61□□□□□ -0.55
PARP4-201ENST00000381989 VPS8Q8N3P4 1428 aa11.61□□□□□ -0.55
PARP4-201ENST00000381989 ZNF316A6NFI3 1004 aaPredicted RBP11.6□□□□□ -0.55
PARP4-201ENST00000381989 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
PARP4-201ENST00000381989 CFTRP13569 1480 aa11.6□□□□□ -0.55
PARP4-201ENST00000381989 EIF5BO60841 1220 aaKnown RBP11.59□□□□□ -0.55
PARP4-201ENST00000381989 FAM50AQ14320 339 aaKnown RBP11.58□□□□□ -0.56
PARP4-201ENST00000381989 POLR3GLQ9BT43 218 aa11.54□□□□□ -0.56
PARP4-201ENST00000381989 LRRIQ1Q96JM4 1722 aa11.53□□□□□ -0.56
PARP4-201ENST00000381989 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
PARP4-201ENST00000381989 ARHGAP35Q9NRY4 1499 aa11.52□□□□□ -0.56
PARP4-201ENST00000381989 ANP32CO43423 234 aa11.52□□□□□ -0.57
PARP4-201ENST00000381989 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
PARP4-201ENST00000381989 SLC24A1O60721 1099 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms