RNA–Protein interactions for RNA: ENST00000484380.2

ABCD4-212, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-212ENST00000484380 NISCHQ9Y2I1 1504 aa30.89■■■□□ 2.54
ABCD4-212ENST00000484380 CCDC180Q9P1Z9 1646 aa26.71■■□□□ 1.87
ABCD4-212ENST00000484380 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
ABCD4-212ENST00000484380 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
ABCD4-212ENST00000484380 DCAF1Q9Y4B6 1507 aa25.59■■□□□ 1.69
ABCD4-212ENST00000484380 SHROOM4Q9ULL8 1493 aa25.52■■□□□ 1.68
ABCD4-212ENST00000484380 AEBP2Q6ZN18 517 aaPredicted RBP25.16■■□□□ 1.62
ABCD4-212ENST00000484380 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
ABCD4-212ENST00000484380 MYO15BQ96JP2 1530 aa25.05■■□□□ 1.6
ABCD4-212ENST00000484380 ABCC9O60706 1549 aa24.9■■□□□ 1.58
ABCD4-212ENST00000484380 SUPT5HO00267 1087 aaKnown RBP24.82■■□□□ 1.56
ABCD4-212ENST00000484380 NACADO15069 1562 aa24.68■■□□□ 1.54
ABCD4-212ENST00000484380 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
ABCD4-212ENST00000484380 RB1CC1Q8TDY2 1594 aa24.31■■□□□ 1.48
ABCD4-212ENST00000484380 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
ABCD4-212ENST00000484380 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
ABCD4-212ENST00000484380 CECR2Q9BXF3 1484 aa23.92■■□□□ 1.42
ABCD4-212ENST00000484380 MROH2BQ7Z745 1585 aa23.88■■□□□ 1.41
ABCD4-212ENST00000484380 BAZ1AQ9NRL2 1556 aaPredicted RBP23.8■■□□□ 1.4
ABCD4-212ENST00000484380 WIZO95785 1651 aa23.73■■□□□ 1.39
ABCD4-212ENST00000484380 SMARCA4P51532 1647 aa23.64■■□□□ 1.37
ABCD4-212ENST00000484380 BICRAQ9NZM4 1560 aa23.6■■□□□ 1.37
ABCD4-212ENST00000484380 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.36
ABCD4-212ENST00000484380 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
ABCD4-212ENST00000484380 EIF4G1Q04637 1599 aaKnown RBP23.45■■□□□ 1.35
ABCD4-212ENST00000484380 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
ABCD4-212ENST00000484380 SMARCA2P51531 1590 aa23.32■■□□□ 1.32
ABCD4-212ENST00000484380 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
ABCD4-212ENST00000484380 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
ABCD4-212ENST00000484380 LOC105371045A0A1W2PR82 267 aa23.19■■□□□ 1.3
ABCD4-212ENST00000484380 ATAD2BQ9ULI0 1458 aa23.06■■□□□ 1.28
ABCD4-212ENST00000484380 ABCC8Q09428 1581 aa22.96■■□□□ 1.27
ABCD4-212ENST00000484380 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.26
ABCD4-212ENST00000484380 FAM9AQ8IZU1 332 aaPredicted RBP22.87■■□□□ 1.25
ABCD4-212ENST00000484380 HMGXB3Q12766 1538 aa22.83■■□□□ 1.24
ABCD4-212ENST00000484380 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
ABCD4-212ENST00000484380 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
ABCD4-212ENST00000484380 EEA1Q15075 1411 aa22.76■■□□□ 1.23
ABCD4-212ENST00000484380 NCAPD3P42695 1498 aa22.75■■□□□ 1.23
ABCD4-212ENST00000484380 WRNQ14191 1432 aaPredicted RBP eCLIP22.73■■□□□ 1.23
ABCD4-212ENST00000484380 HRCP23327 699 aa22.71■■□□□ 1.23
ABCD4-212ENST00000484380 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
ABCD4-212ENST00000484380 SYNJ1O43426 1573 aa22.66■■□□□ 1.22
ABCD4-212ENST00000484380 SOGA1O94964 1423 aa22.63■■□□□ 1.21
ABCD4-212ENST00000484380 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
ABCD4-212ENST00000484380 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
ABCD4-212ENST00000484380 RUSC2Q8N2Y8 1516 aa22.52■■□□□ 1.2
ABCD4-212ENST00000484380 TNIKQ9UKE5 1360 aa22.5■■□□□ 1.19
ABCD4-212ENST00000484380 CSRNP3Q8WYN3 585 aa22.48■■□□□ 1.19
ABCD4-212ENST00000484380 EHMT2Q96KQ7 1210 aa22.48■■□□□ 1.19
ABCD4-212ENST00000484380 CC2D2AQ9P2K1 1620 aa22.48■■□□□ 1.19
ABCD4-212ENST00000484380 KIF21BO75037 1637 aa22.47■■□□□ 1.19
ABCD4-212ENST00000484380 GOLGA3Q08378 1498 aa22.47■■□□□ 1.19
ABCD4-212ENST00000484380 PRDM2Q13029 1718 aa22.46■■□□□ 1.19
ABCD4-212ENST00000484380 CFTRP13569 1480 aa22.43■■□□□ 1.18
ABCD4-212ENST00000484380 CEP162Q5TB80 1403 aa22.42■■□□□ 1.18
ABCD4-212ENST00000484380 CEP164Q9UPV0 1460 aa22.4■■□□□ 1.18
ABCD4-212ENST00000484380 CUX1P39880 1505 aa22.3■■□□□ 1.16
ABCD4-212ENST00000484380 DNAJC5BQ9UF47 199 aa22.22■■□□□ 1.15
ABCD4-212ENST00000484380 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
ABCD4-212ENST00000484380 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
ABCD4-212ENST00000484380 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
ABCD4-212ENST00000484380 RAPGEF2Q9Y4G8 1499 aa22.16■■□□□ 1.14
ABCD4-212ENST00000484380 PRXQ9BXM0 1461 aa22.14■■□□□ 1.13
ABCD4-212ENST00000484380 ZEB1P37275 1124 aaPredicted RBP22.1■■□□□ 1.13
ABCD4-212ENST00000484380 CLIP1P30622 1438 aa22.09■■□□□ 1.13
ABCD4-212ENST00000484380 KIF27Q86VH2 1401 aa22.08■■□□□ 1.13
ABCD4-212ENST00000484380 PPARGC1BQ86YN6 1023 aaKnown RBP22.03■■□□□ 1.12
ABCD4-212ENST00000484380 VPS8Q8N3P4 1428 aa22.02■■□□□ 1.12
ABCD4-212ENST00000484380 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
ABCD4-212ENST00000484380 FGD5Q6ZNL6 1462 aa21.93■■□□□ 1.1
ABCD4-212ENST00000484380 DNMBPQ6XZF7 1577 aa21.92■■□□□ 1.1
ABCD4-212ENST00000484380 LAMC3Q9Y6N6 1575 aa21.9■■□□□ 1.1
ABCD4-212ENST00000484380 CUX2O14529 1486 aa21.89■■□□□ 1.1
ABCD4-212ENST00000484380 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
ABCD4-212ENST00000484380 IGF1RP08069 1367 aa21.81■■□□□ 1.08
ABCD4-212ENST00000484380 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
ABCD4-212ENST00000484380 NESP48681 1621 aa21.79■■□□□ 1.08
ABCD4-212ENST00000484380 ABCA10Q8WWZ4 1543 aa21.78■■□□□ 1.08
ABCD4-212ENST00000484380 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
ABCD4-212ENST00000484380 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
ABCD4-212ENST00000484380 ARHGAP35Q9NRY4 1499 aa21.72■■□□□ 1.07
ABCD4-212ENST00000484380 CARMIL1Q5VZK9 1371 aa21.71■■□□□ 1.07
ABCD4-212ENST00000484380 TTBK1Q5TCY1 1321 aaPredicted RBP21.71■■□□□ 1.07
ABCD4-212ENST00000484380 CUL7Q14999 1698 aa21.69■■□□□ 1.06
ABCD4-212ENST00000484380 APLP2Q06481 763 aa21.69■■□□□ 1.06
ABCD4-212ENST00000484380 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
ABCD4-212ENST00000484380 PDS5BQ9NTI5 1447 aa21.65■■□□□ 1.06
ABCD4-212ENST00000484380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.65■■□□□ 1.06
ABCD4-212ENST00000484380 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
ABCD4-212ENST00000484380 CCER1Q8TC90 406 aaPredicted RBP21.64■■□□□ 1.05
ABCD4-212ENST00000484380 RANGAP1P46060 587 aaPredicted RBP21.61■■□□□ 1.05
ABCD4-212ENST00000484380 KIF21AQ7Z4S6 1674 aa21.6■■□□□ 1.05
ABCD4-212ENST00000484380 ABCA5Q8WWZ7 1642 aa21.6■■□□□ 1.05
ABCD4-212ENST00000484380 MAP3K1Q13233 1512 aa21.57■■□□□ 1.04
ABCD4-212ENST00000484380 CTTNBP2Q8WZ74 1663 aa21.55■■□□□ 1.04
ABCD4-212ENST00000484380 EFCAB5A4FU69 1503 aa21.52■■□□□ 1.04
ABCD4-212ENST00000484380 TIAM1Q13009 1591 aa21.49■■□□□ 1.03
ABCD4-212ENST00000484380 RRBP1Q9P2E9 1410 aaKnown RBP21.48■■□□□ 1.03
ABCD4-212ENST00000484380 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms