RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 NISCHQ9Y2I1 1504 aa51.77■■■■■ 5.88
TMEM50B-204ENST00000442441 ABCC9O60706 1549 aa46.96■■■■■ 5.11
TMEM50B-204ENST00000442441 CCDC180Q9P1Z9 1646 aa46.6■■■■■ 5.05
TMEM50B-204ENST00000442441 RB1CC1Q8TDY2 1594 aa44.54■■■■■ 4.72
TMEM50B-204ENST00000442441 DNAJC5BQ9UF47 199 aa44.38■■■■■ 4.7
TMEM50B-204ENST00000442441 NACADO15069 1562 aa44.15■■■■■ 4.66
TMEM50B-204ENST00000442441 DCAF8L2P0C7V8 631 aa43.86■■■■■ 4.61
TMEM50B-204ENST00000442441 PABPN1Q86U42 306 aaKnown RBP eCLIP43.67■■■■■ 4.58
TMEM50B-204ENST00000442441 UNC13AQ9UPW8 1703 aa43.5■■■■■ 4.55
TMEM50B-204ENST00000442441 MYO15BQ96JP2 1530 aa43.44■■■■■ 4.54
TMEM50B-204ENST00000442441 BICRAQ9NZM4 1560 aa43.25■■■■■ 4.51
TMEM50B-204ENST00000442441 ZCCHC6Q5VYS8 1495 aaKnown RBP42.82■■■■■ 4.45
TMEM50B-204ENST00000442441 DCAF1Q9Y4B6 1507 aa42.75■■■■■ 4.43
TMEM50B-204ENST00000442441 SHROOM4Q9ULL8 1493 aa42.66■■■■■ 4.42
TMEM50B-204ENST00000442441 SCRIBQ14160 1630 aa42.43■■■■■ 4.38
TMEM50B-204ENST00000442441 CC2D2AQ9P2K1 1620 aa42.39■■■■■ 4.38
TMEM50B-204ENST00000442441 CECR2Q9BXF3 1484 aa42.35■■■■■ 4.37
TMEM50B-204ENST00000442441 EIF4G1Q04637 1599 aaKnown RBP42.22■■■■■ 4.35
TMEM50B-204ENST00000442441 DNAJC5Q9H3Z4 198 aa41.04■■■■■ 4.16
TMEM50B-204ENST00000442441 NCAPD3P42695 1498 aa40.78■■■■■ 4.12
TMEM50B-204ENST00000442441 CUX2O14529 1486 aa40.63■■■■■ 4.09
TMEM50B-204ENST00000442441 ATAD2BQ9ULI0 1458 aa40.59■■■■■ 4.09
TMEM50B-204ENST00000442441 ERCC6Q03468 1493 aa40.58■■■■■ 4.09
TMEM50B-204ENST00000442441 SMARCA2P51531 1590 aa40.46■■■■■ 4.07
TMEM50B-204ENST00000442441 SMARCA4P51532 1647 aa40.45■■■■■ 4.07
TMEM50B-204ENST00000442441 HMGXB3Q12766 1538 aa40.43■■■■■ 4.06
TMEM50B-204ENST00000442441 NESP48681 1621 aa40.24■■■■■ 4.03
TMEM50B-204ENST00000442441 BAZ1AQ9NRL2 1556 aaPredicted RBP40.21■■■■■ 4.03
TMEM50B-204ENST00000442441 BAZ1BQ9UIG0 1483 aaKnown RBP40.19■■■■■ 4.02
TMEM50B-204ENST00000442441 PEG3Q9GZU2 1588 aa40.07■■■■■ 4.01
TMEM50B-204ENST00000442441 LAMC3Q9Y6N6 1575 aa39.9■■■■□ 3.98
TMEM50B-204ENST00000442441 THOC2Q8NI27 1593 aaKnown RBP39.89■■■■□ 3.98
TMEM50B-204ENST00000442441 MROH2BQ7Z745 1585 aa39.88■■■■□ 3.97
TMEM50B-204ENST00000442441 PDS5BQ9NTI5 1447 aa39.7■■■■□ 3.95
TMEM50B-204ENST00000442441 KIF21AQ7Z4S6 1674 aa39.69■■■■□ 3.94
TMEM50B-204ENST00000442441 CADPSQ9ULU8 1353 aa39.53■■■■□ 3.92
TMEM50B-204ENST00000442441 MRC2Q9UBG0 1479 aa39.37■■■■□ 3.89
TMEM50B-204ENST00000442441 WIZO95785 1651 aa39.37■■■■□ 3.89
TMEM50B-204ENST00000442441 WDR62O43379 1518 aa39.28■■■■□ 3.88
TMEM50B-204ENST00000442441 CEP164Q9UPV0 1460 aa39.14■■■■□ 3.86
TMEM50B-204ENST00000442441 FANCD2Q9BXW9 1451 aa39.07■■■■□ 3.85
TMEM50B-204ENST00000442441 TRIM41Q8WV44 630 aa39.07■■■■□ 3.85
TMEM50B-204ENST00000442441 CFTRP13569 1480 aa38.99■■■■□ 3.83
TMEM50B-204ENST00000442441 RSF1Q96T23 1441 aaPredicted RBP38.94■■■■□ 3.82
TMEM50B-204ENST00000442441 TOP2AP11388 1531 aaKnown RBP38.86■■■■□ 3.81
TMEM50B-204ENST00000442441 URB2Q14146 1524 aaKnown RBP38.77■■■■□ 3.8
TMEM50B-204ENST00000442441 OSCARQ8IYS5 282 aa38.74■■■■□ 3.79
TMEM50B-204ENST00000442441 PRDM2Q13029 1718 aa38.53■■■■□ 3.76
TMEM50B-204ENST00000442441 CCDC88BA6NC98 1476 aa38.44■■■■□ 3.74
TMEM50B-204ENST00000442441 IFT140Q96RY7 1462 aa38.38■■■■□ 3.73
TMEM50B-204ENST00000442441 ZNF608Q9ULD9 1512 aaPredicted RBP38.35■■■■□ 3.73
TMEM50B-204ENST00000442441 TOPBP1Q92547 1522 aa38.28■■■■□ 3.72
TMEM50B-204ENST00000442441 RIMBP3CA6NJZ7 1639 aa38.23■■■■□ 3.71
TMEM50B-204ENST00000442441 RIMBP3BA6NNM3 1639 aa38.23■■■■□ 3.71
TMEM50B-204ENST00000442441 RIMBP3Q9UFD9 1639 aa38.23■■■■□ 3.71
TMEM50B-204ENST00000442441 ABCC8Q09428 1581 aa38.19■■■■□ 3.7
TMEM50B-204ENST00000442441 EIF4G3O43432 1585 aaKnown RBP38.1■■■■□ 3.69
TMEM50B-204ENST00000442441 DNMBPQ6XZF7 1577 aa38.1■■■■□ 3.69
TMEM50B-204ENST00000442441 ARHGEF11O15085 1522 aa38.09■■■■□ 3.69
TMEM50B-204ENST00000442441 TARBP1Q13395 1621 aaKnown RBP37.97■■■■□ 3.67
TMEM50B-204ENST00000442441 AQRO60306 1485 aaKnown RBP eCLIP37.96■■■■□ 3.671e-9■■■□□ 17.5
TMEM50B-204ENST00000442441 CHD1O14646 1710 aa37.88■■■■□ 3.65
TMEM50B-204ENST00000442441 POLA1P09884 1462 aaPredicted RBP37.87■■■■□ 3.65
TMEM50B-204ENST00000442441 CYB5RLQ6IPT4 315 aa37.85■■■■□ 3.65
TMEM50B-204ENST00000442441 FBLN2P98095 1184 aa37.79■■■■□ 3.64
TMEM50B-204ENST00000442441 RAD54L2Q9Y4B4 1467 aa37.74■■■■□ 3.63
TMEM50B-204ENST00000442441 SOGA1O94964 1423 aa37.7■■■■□ 3.63
TMEM50B-204ENST00000442441 ARAP1Q96P48 1450 aa37.69■■■■□ 3.62
TMEM50B-204ENST00000442441 TDRD9Q8NDG6 1382 aaKnown RBP37.68■■■■□ 3.62
TMEM50B-204ENST00000442441 FGD5Q6ZNL6 1462 aa37.58■■■■□ 3.61
TMEM50B-204ENST00000442441 WDR97A6NE52 1622 aa37.56■■■■□ 3.6
TMEM50B-204ENST00000442441 SNAPC4Q5SXM2 1469 aa37.55■■■■□ 3.6
TMEM50B-204ENST00000442441 TRHP20396 242 aaPredicted RBP37.54■■■■□ 3.6
TMEM50B-204ENST00000442441 CUX1P39880 1505 aa37.49■■■■□ 3.59
TMEM50B-204ENST00000442441 CHMP7Q8WUX9 453 aaPredicted RBP37.46■■■■□ 3.59
TMEM50B-204ENST00000442441 CLASP1Q7Z460 1538 aa37.46■■■■□ 3.59
TMEM50B-204ENST00000442441 MAGI1Q96QZ7 1491 aaPredicted RBP37.45■■■■□ 3.59
TMEM50B-204ENST00000442441 GRIN2BQ13224 1484 aa37.41■■■■□ 3.58
TMEM50B-204ENST00000442441 SYNJ1O43426 1573 aa37.4■■■■□ 3.58
TMEM50B-204ENST00000442441 SYNJ2O15056 1496 aa37.33■■■■□ 3.57
TMEM50B-204ENST00000442441 GAPVD1Q14C86 1478 aa37.24■■■■□ 3.55
TMEM50B-204ENST00000442441 PBRM1Q86U86 1689 aa37.21■■■■□ 3.55
TMEM50B-204ENST00000442441 ABCA10Q8WWZ4 1543 aa37.14■■■■□ 3.54
TMEM50B-204ENST00000442441 ABCA5Q8WWZ7 1642 aa37.1■■■■□ 3.53
TMEM50B-204ENST00000442441 SUPT5HO00267 1087 aaKnown RBP36.95■■■■□ 3.51
TMEM50B-204ENST00000442441 WRNQ14191 1432 aaPredicted RBP eCLIP36.93■■■■□ 3.5
TMEM50B-204ENST00000442441 GRIN2AQ12879 1464 aa36.93■■■■□ 3.5
TMEM50B-204ENST00000442441 ADAMTS12P58397 1594 aa36.85■■■■□ 3.49
TMEM50B-204ENST00000442441 ERCC6L2Q5T890 1561 aa36.84■■■■□ 3.49
TMEM50B-204ENST00000442441 NUP160Q12769 1436 aa36.83■■■■□ 3.49
TMEM50B-204ENST00000442441 CEP170Q5SW79 1584 aa36.8■■■■□ 3.48
TMEM50B-204ENST00000442441 TOP2BQ02880 1626 aa36.79■■■■□ 3.48
TMEM50B-204ENST00000442441 BIVM-ERCC5R4GMW8 1640 aa36.79■■■■□ 3.48
TMEM50B-204ENST00000442441 FHAD1B1AJZ9 1412 aa36.76■■■■□ 3.47
TMEM50B-204ENST00000442441 AEBP2Q6ZN18 517 aaPredicted RBP36.71■■■■□ 3.47
TMEM50B-204ENST00000442441 SHROOM2Q13796 1616 aa36.69■■■■□ 3.46
TMEM50B-204ENST00000442441 ERICH3Q5RHP9 1530 aa36.67■■■■□ 3.46
TMEM50B-204ENST00000442441 PRG4Q92954 1404 aaPredicted RBP36.51■■■■□ 3.43
TMEM50B-204ENST00000442441 JPH4Q96JJ6 628 aa36.46■■■■□ 3.43
TMEM50B-204ENST00000442441 KIF13AQ9H1H9 1805 aa36.38■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms