RNA–Protein interactions for RNA: ENST00000571378.5

SRRM2-208, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 2,870 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-208ENST00000571378 NISCHQ9Y2I1 1504 aa31.45■■■□□ 2.63
SRRM2-208ENST00000571378 CCDC180Q9P1Z9 1646 aa27.17■■□□□ 1.94
SRRM2-208ENST00000571378 ZCCHC6Q5VYS8 1495 aaKnown RBP26.61■■□□□ 1.85
SRRM2-208ENST00000571378 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
SRRM2-208ENST00000571378 SHROOM4Q9ULL8 1493 aa26.06■■□□□ 1.76
SRRM2-208ENST00000571378 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
SRRM2-208ENST00000571378 MYO15BQ96JP2 1530 aa25.48■■□□□ 1.67
SRRM2-208ENST00000571378 SUPT5HO00267 1087 aaKnown RBP25.45■■□□□ 1.66
SRRM2-208ENST00000571378 ABCC9O60706 1549 aa25.11■■□□□ 1.61
SRRM2-208ENST00000571378 NACADO15069 1562 aa25.05■■□□□ 1.6
SRRM2-208ENST00000571378 SCRIBQ14160 1630 aa24.99■■□□□ 1.59
SRRM2-208ENST00000571378 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
SRRM2-208ENST00000571378 RSF1Q96T23 1441 aaPredicted RBP24.66■■□□□ 1.54
SRRM2-208ENST00000571378 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.53
SRRM2-208ENST00000571378 CECR2Q9BXF3 1484 aa24.31■■□□□ 1.48
SRRM2-208ENST00000571378 MROH2BQ7Z745 1585 aa24.3■■□□□ 1.48
SRRM2-208ENST00000571378 UNC13AQ9UPW8 1703 aa24.25■■□□□ 1.47
SRRM2-208ENST00000571378 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
SRRM2-208ENST00000571378 WIZO95785 1651 aa24.19■■□□□ 1.46
SRRM2-208ENST00000571378 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
SRRM2-208ENST00000571378 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
SRRM2-208ENST00000571378 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
SRRM2-208ENST00000571378 TRIM41Q8WV44 630 aa23.92■■□□□ 1.42
SRRM2-208ENST00000571378 BICRAQ9NZM4 1560 aa23.88■■□□□ 1.41
SRRM2-208ENST00000571378 LOC105371045A0A1W2PR82 267 aa23.86■■□□□ 1.41
SRRM2-208ENST00000571378 SMARCA2P51531 1590 aa23.77■■□□□ 1.4
SRRM2-208ENST00000571378 PEG3Q9GZU2 1588 aa23.76■■□□□ 1.39
SRRM2-208ENST00000571378 HRCP23327 699 aa23.69■■□□□ 1.38
SRRM2-208ENST00000571378 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
SRRM2-208ENST00000571378 PCGF6Q9BYE7 350 aa23.63■■□□□ 1.37
SRRM2-208ENST00000571378 TRIM26Q12899 539 aaPredicted RBP23.51■■□□□ 1.35
SRRM2-208ENST00000571378 PABPN1Q86U42 306 aaKnown RBP eCLIP23.46■■□□□ 1.35
SRRM2-208ENST00000571378 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
SRRM2-208ENST00000571378 FAM9AQ8IZU1 332 aaPredicted RBP23.43■■□□□ 1.34
SRRM2-208ENST00000571378 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.34
SRRM2-208ENST00000571378 EEA1Q15075 1411 aa23.36■■□□□ 1.33
SRRM2-208ENST00000571378 BAZ1BQ9UIG0 1483 aaKnown RBP23.31■■□□□ 1.32
SRRM2-208ENST00000571378 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
SRRM2-208ENST00000571378 HMGXB3Q12766 1538 aa23.17■■□□□ 1.3
SRRM2-208ENST00000571378 SOGA1O94964 1423 aa23.13■■□□□ 1.29
SRRM2-208ENST00000571378 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
SRRM2-208ENST00000571378 TNIKQ9UKE5 1360 aa23.1■■□□□ 1.29
SRRM2-208ENST00000571378 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
SRRM2-208ENST00000571378 ZEB1P37275 1124 aaPredicted RBP23.05■■□□□ 1.28
SRRM2-208ENST00000571378 KIF21BO75037 1637 aa23.05■■□□□ 1.28
SRRM2-208ENST00000571378 GOLGA3Q08378 1498 aa23.04■■□□□ 1.28
SRRM2-208ENST00000571378 CSRNP3Q8WYN3 585 aa23.03■■□□□ 1.28
SRRM2-208ENST00000571378 CEP162Q5TB80 1403 aa23.02■■□□□ 1.28
SRRM2-208ENST00000571378 EHMT2Q96KQ7 1210 aa23.01■■□□□ 1.27
SRRM2-208ENST00000571378 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
SRRM2-208ENST00000571378 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
SRRM2-208ENST00000571378 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
SRRM2-208ENST00000571378 CEP164Q9UPV0 1460 aa22.95■■□□□ 1.27
SRRM2-208ENST00000571378 PPARGC1BQ86YN6 1023 aaKnown RBP22.9■■□□□ 1.26
SRRM2-208ENST00000571378 PRDM2Q13029 1718 aa22.89■■□□□ 1.25
SRRM2-208ENST00000571378 CFTRP13569 1480 aa22.78■■□□□ 1.24
SRRM2-208ENST00000571378 UBTFP17480 764 aaKnown RBP22.75■■□□□ 1.23
SRRM2-208ENST00000571378 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
SRRM2-208ENST00000571378 CUX1P39880 1505 aa22.69■■□□□ 1.22
SRRM2-208ENST00000571378 RAPGEF2Q9Y4G8 1499 aa22.65■■□□□ 1.22
SRRM2-208ENST00000571378 CLIP1P30622 1438 aa22.65■■□□□ 1.22
SRRM2-208ENST00000571378 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
SRRM2-208ENST00000571378 VPS8Q8N3P4 1428 aa22.6■■□□□ 1.21
SRRM2-208ENST00000571378 KIF27Q86VH2 1401 aa22.55■■□□□ 1.2
SRRM2-208ENST00000571378 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
SRRM2-208ENST00000571378 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
SRRM2-208ENST00000571378 CCER1Q8TC90 406 aaPredicted RBP22.4■■□□□ 1.18
SRRM2-208ENST00000571378 ARAP1Q96P48 1450 aa22.37■■□□□ 1.17
SRRM2-208ENST00000571378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.36■■□□□ 1.17
SRRM2-208ENST00000571378 APLP2Q06481 763 aa22.3■■□□□ 1.16
SRRM2-208ENST00000571378 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
SRRM2-208ENST00000571378 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
SRRM2-208ENST00000571378 CUX2O14529 1486 aa22.28■■□□□ 1.16
SRRM2-208ENST00000571378 TTBK1Q5TCY1 1321 aaPredicted RBP22.28■■□□□ 1.16
SRRM2-208ENST00000571378 FANCD2Q9BXW9 1451 aa22.27■■□□□ 1.16
SRRM2-208ENST00000571378 DNAJC5BQ9UF47 199 aa22.24■■□□□ 1.15
SRRM2-208ENST00000571378 IGF1RP08069 1367 aa22.22■■□□□ 1.15
SRRM2-208ENST00000571378 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.15
SRRM2-208ENST00000571378 ARHGAP35Q9NRY4 1499 aa22.2■■□□□ 1.14
SRRM2-208ENST00000571378 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
SRRM2-208ENST00000571378 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
SRRM2-208ENST00000571378 TOPBP1Q92547 1522 aa22.14■■□□□ 1.13
SRRM2-208ENST00000571378 CUL7Q14999 1698 aa22.13■■□□□ 1.13
SRRM2-208ENST00000571378 CARMIL1Q5VZK9 1371 aa22.13■■□□□ 1.13
SRRM2-208ENST00000571378 WDR97A6NE52 1622 aa22.11■■□□□ 1.13
SRRM2-208ENST00000571378 RRBP1Q9P2E9 1410 aaKnown RBP22.08■■□□□ 1.12
SRRM2-208ENST00000571378 POLA1P09884 1462 aaPredicted RBP22.08■■□□□ 1.12
SRRM2-208ENST00000571378 RANGAP1P46060 587 aaPredicted RBP22.06■■□□□ 1.12
SRRM2-208ENST00000571378 CTTNBP2Q8WZ74 1663 aa22.02■■□□□ 1.12
SRRM2-208ENST00000571378 TIAM1Q13009 1591 aa22.02■■□□□ 1.12
SRRM2-208ENST00000571378 NESP48681 1621 aa22.02■■□□□ 1.12
SRRM2-208ENST00000571378 EFCAB5A4FU69 1503 aa22.01■■□□□ 1.11
SRRM2-208ENST00000571378 HNRNPUL2Q1KMD3 747 aaKnown RBP22.01■■□□□ 1.11
SRRM2-208ENST00000571378 CFAP43Q8NDM7 1665 aa22■■□□□ 1.11
SRRM2-208ENST00000571378 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
SRRM2-208ENST00000571378 RAD54L2Q9Y4B4 1467 aa21.97■■□□□ 1.11
SRRM2-208ENST00000571378 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
SRRM2-208ENST00000571378 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
SRRM2-208ENST00000571378 ABCA5Q8WWZ7 1642 aa21.96■■□□□ 1.11
SRRM2-208ENST00000571378 KANK4Q5T7N3 995 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms