Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CSNK1G3Q9Y6M4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CSNK1G3Q9Y6M4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.33■■□□□ 1.49
CSNK1G3Q9Y6M4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CSNK1G3Q9Y6M4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CSNK1G3Q9Y6M4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CSNK1G3Q9Y6M4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CSNK1G3Q9Y6M4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CSNK1G3Q9Y6M4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.32■■□□□ 1.48
CSNK1G3Q9Y6M4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CSNK1G3Q9Y6M4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CSNK1G3Q9Y6M4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CSNK1G3Q9Y6M4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CSNK1G3Q9Y6M4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CSNK1G3Q9Y6M4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CSNK1G3Q9Y6M4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
CSNK1G3Q9Y6M4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.31■■□□□ 1.48
CSNK1G3Q9Y6M4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.3■■□□□ 1.48
CSNK1G3Q9Y6M4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.3■■□□□ 1.48
CSNK1G3Q9Y6M4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CSNK1G3Q9Y6M4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CSNK1G3Q9Y6M4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.29■■□□□ 1.48
CSNK1G3Q9Y6M4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CSNK1G3Q9Y6M4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CSNK1G3Q9Y6M4 MIR3960-201ENST00000583311 91 ntBASIC24.29■■□□□ 1.48
CSNK1G3Q9Y6M4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.29■■□□□ 1.48
CSNK1G3Q9Y6M4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CSNK1G3Q9Y6M4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CSNK1G3Q9Y6M4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.28■■□□□ 1.48
CSNK1G3Q9Y6M4 AC093536.1-201ENST00000569153 554 ntBASIC24.28■■□□□ 1.48
CSNK1G3Q9Y6M4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.28■■□□□ 1.48
CSNK1G3Q9Y6M4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.28■■□□□ 1.48
CSNK1G3Q9Y6M4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.28■■□□□ 1.48
CSNK1G3Q9Y6M4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CSNK1G3Q9Y6M4 RAP2CP1-202ENST00000605179 643 ntBASIC24.27■■□□□ 1.48
CSNK1G3Q9Y6M4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CSNK1G3Q9Y6M4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.25■■□□□ 1.47
CSNK1G3Q9Y6M4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSNK1G3Q9Y6M4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSNK1G3Q9Y6M4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSNK1G3Q9Y6M4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.25■■□□□ 1.47
CSNK1G3Q9Y6M4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.25■■□□□ 1.47
CSNK1G3Q9Y6M4 DUX4L18-201ENST00000553347 1267 ntBASIC24.25■■□□□ 1.47
CSNK1G3Q9Y6M4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSNK1G3Q9Y6M4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CSNK1G3Q9Y6M4 RARRES2P1-201ENST00000474487 481 ntBASIC24.23■■□□□ 1.47
CSNK1G3Q9Y6M4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.23■■□□□ 1.47
CSNK1G3Q9Y6M4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
CSNK1G3Q9Y6M4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSNK1G3Q9Y6M4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
CSNK1G3Q9Y6M4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSNK1G3Q9Y6M4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CSNK1G3Q9Y6M4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSNK1G3Q9Y6M4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.21■■□□□ 1.47
CSNK1G3Q9Y6M4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSNK1G3Q9Y6M4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
CSNK1G3Q9Y6M4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.2■■□□□ 1.46
CSNK1G3Q9Y6M4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CSNK1G3Q9Y6M4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CSNK1G3Q9Y6M4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSNK1G3Q9Y6M4 DUX4L9-201ENST00000449051 1259 ntBASIC24.19■■□□□ 1.46
CSNK1G3Q9Y6M4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.18■■□□□ 1.46
CSNK1G3Q9Y6M4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.18■■□□□ 1.46
CSNK1G3Q9Y6M4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CSNK1G3Q9Y6M4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSNK1G3Q9Y6M4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSNK1G3Q9Y6M4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSNK1G3Q9Y6M4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSNK1G3Q9Y6M4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CSNK1G3Q9Y6M4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CSNK1G3Q9Y6M4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CSNK1G3Q9Y6M4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CSNK1G3Q9Y6M4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.17■■□□□ 1.46
CSNK1G3Q9Y6M4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.17■■□□□ 1.46
CSNK1G3Q9Y6M4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CSNK1G3Q9Y6M4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
CSNK1G3Q9Y6M4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSNK1G3Q9Y6M4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSNK1G3Q9Y6M4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CSNK1G3Q9Y6M4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSNK1G3Q9Y6M4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CSNK1G3Q9Y6M4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.16■■□□□ 1.46
CSNK1G3Q9Y6M4 AC074183.2-201ENST00000623112 922 ntBASIC24.16■■□□□ 1.46
CSNK1G3Q9Y6M4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CSNK1G3Q9Y6M4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CSNK1G3Q9Y6M4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CSNK1G3Q9Y6M4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.15■■□□□ 1.46
CSNK1G3Q9Y6M4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CSNK1G3Q9Y6M4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.15■■□□□ 1.46
CSNK1G3Q9Y6M4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.14■■□□□ 1.45
CSNK1G3Q9Y6M4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CSNK1G3Q9Y6M4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
CSNK1G3Q9Y6M4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CSNK1G3Q9Y6M4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G3Q9Y6M4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.13■■□□□ 1.45
CSNK1G3Q9Y6M4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G3Q9Y6M4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.13■■□□□ 1.45
CSNK1G3Q9Y6M4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G3Q9Y6M4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G3Q9Y6M4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms