Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHGC3Q9UN70 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHGC3Q9UN70 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGC3Q9UN70 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGC3Q9UN70 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGC3Q9UN70 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.27■■□□□ 1.8
PCDHGC3Q9UN70 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGC3Q9UN70 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHGC3Q9UN70 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGC3Q9UN70 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHGC3Q9UN70 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGC3Q9UN70 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.25■■□□□ 1.79
PCDHGC3Q9UN70 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGC3Q9UN70 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGC3Q9UN70 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGC3Q9UN70 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
PCDHGC3Q9UN70 AP004609.3-201ENST00000610705 1884 ntBASIC26.24■■□□□ 1.79
PCDHGC3Q9UN70 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGC3Q9UN70 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHGC3Q9UN70 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PCDHGC3Q9UN70 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGC3Q9UN70 AC142472.1-201ENST00000612013 1741 ntBASIC26.23■■□□□ 1.79
PCDHGC3Q9UN70 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.23■■□□□ 1.79
PCDHGC3Q9UN70 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGC3Q9UN70 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGC3Q9UN70 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGC3Q9UN70 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGC3Q9UN70 AL359258.2-201ENST00000564063 1566 ntBASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
PCDHGC3Q9UN70 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.21■■□□□ 1.79
PCDHGC3Q9UN70 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHGC3Q9UN70 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.2■■□□□ 1.78
PCDHGC3Q9UN70 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGC3Q9UN70 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGC3Q9UN70 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHGC3Q9UN70 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGC3Q9UN70 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGC3Q9UN70 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGC3Q9UN70 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
PCDHGC3Q9UN70 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGC3Q9UN70 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGC3Q9UN70 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
PCDHGC3Q9UN70 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGC3Q9UN70 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.18■■□□□ 1.78
PCDHGC3Q9UN70 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGC3Q9UN70 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGC3Q9UN70 AC126177.7-201ENST00000547904 679 ntBASIC26.17■■□□□ 1.78
PCDHGC3Q9UN70 MIR4449-201ENST00000578365 66 ntBASIC26.17■■□□□ 1.78
PCDHGC3Q9UN70 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGC3Q9UN70 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGC3Q9UN70 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGC3Q9UN70 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.16■■□□□ 1.78
PCDHGC3Q9UN70 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.16■■□□□ 1.78
PCDHGC3Q9UN70 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGC3Q9UN70 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.16■■□□□ 1.78
PCDHGC3Q9UN70 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGC3Q9UN70 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.15■■□□□ 1.78
PCDHGC3Q9UN70 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGC3Q9UN70 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.15■■□□□ 1.78
PCDHGC3Q9UN70 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHGC3Q9UN70 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDHGC3Q9UN70 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGC3Q9UN70 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.14■■□□□ 1.78
PCDHGC3Q9UN70 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGC3Q9UN70 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGC3Q9UN70 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGC3Q9UN70 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGC3Q9UN70 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
PCDHGC3Q9UN70 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.13■■□□□ 1.77
PCDHGC3Q9UN70 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHGC3Q9UN70 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHGC3Q9UN70 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHGC3Q9UN70 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHGC3Q9UN70 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGC3Q9UN70 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGC3Q9UN70 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.1■■□□□ 1.77
PCDHGC3Q9UN70 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.1■■□□□ 1.77
PCDHGC3Q9UN70 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGC3Q9UN70 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGC3Q9UN70 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.08■■□□□ 1.77
PCDHGC3Q9UN70 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGC3Q9UN70 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGC3Q9UN70 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.08■■□□□ 1.76
PCDHGC3Q9UN70 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
PCDHGC3Q9UN70 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHGC3Q9UN70 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGC3Q9UN70 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGC3Q9UN70 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHGC3Q9UN70 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.07■■□□□ 1.76
PCDHGC3Q9UN70 AC060814.1-201ENST00000554326 538 ntBASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms