Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.14■■□□□ 1.78
TRIM11Q96F44 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM11Q96F44 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM11Q96F44 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM11Q96F44 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.14■■□□□ 1.78
TRIM11Q96F44 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM11Q96F44 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM11Q96F44 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM11Q96F44 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM11Q96F44 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM11Q96F44 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM11Q96F44 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM11Q96F44 AC091060.1-201ENST00000623524 1766 ntBASIC26.13■■□□□ 1.77
TRIM11Q96F44 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM11Q96F44 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
TRIM11Q96F44 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.12■■□□□ 1.77
TRIM11Q96F44 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM11Q96F44 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM11Q96F44 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.12■■□□□ 1.77
TRIM11Q96F44 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM11Q96F44 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM11Q96F44 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM11Q96F44 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.11■■□□□ 1.77
TRIM11Q96F44 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM11Q96F44 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM11Q96F44 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM11Q96F44 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM11Q96F44 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
TRIM11Q96F44 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
TRIM11Q96F44 MIR219A2-201ENST00000608502 1504 ntBASIC26.1■■□□□ 1.77
TRIM11Q96F44 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.1■■□□□ 1.77
TRIM11Q96F44 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.1■■□□□ 1.77
TRIM11Q96F44 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.1■■□□□ 1.77
TRIM11Q96F44 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TRIM11Q96F44 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TRIM11Q96F44 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRIM11Q96F44 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.09■■□□□ 1.77
TRIM11Q96F44 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TRIM11Q96F44 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.09■■□□□ 1.77
TRIM11Q96F44 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRIM11Q96F44 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.09■■□□□ 1.77
TRIM11Q96F44 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
TRIM11Q96F44 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRIM11Q96F44 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRIM11Q96F44 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.08■■□□□ 1.77
TRIM11Q96F44 ABHD17AP4-201ENST00000411545 909 ntBASIC26.08■■□□□ 1.77
TRIM11Q96F44 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.08■■□□□ 1.77
TRIM11Q96F44 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.08■■□□□ 1.77
TRIM11Q96F44 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.08■■□□□ 1.77
TRIM11Q96F44 AC145676.1-201ENST00000514988 2004 ntBASIC26.07■■□□□ 1.76
TRIM11Q96F44 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TRIM11Q96F44 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.07■■□□□ 1.76
TRIM11Q96F44 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TRIM11Q96F44 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRIM11Q96F44 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.06■■□□□ 1.76
TRIM11Q96F44 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRIM11Q96F44 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRIM11Q96F44 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TRIM11Q96F44 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.05■■□□□ 1.76
TRIM11Q96F44 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRIM11Q96F44 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.04■■□□□ 1.76
TRIM11Q96F44 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TRIM11Q96F44 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TRIM11Q96F44 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRIM11Q96F44 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.04■■□□□ 1.76
TRIM11Q96F44 CR559946.2-201ENST00000623684 991 ntBASIC26.03■■□□□ 1.76
TRIM11Q96F44 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TRIM11Q96F44 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
TRIM11Q96F44 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TRIM11Q96F44 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TRIM11Q96F44 AC092803.2-201ENST00000564287 1899 ntBASIC26.02■■□□□ 1.76
TRIM11Q96F44 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TRIM11Q96F44 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
TRIM11Q96F44 HLA-V-202ENST00000446817 847 ntBASIC26.02■■□□□ 1.76
TRIM11Q96F44 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TRIM11Q96F44 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TRIM11Q96F44 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TRIM11Q96F44 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.02■■□□□ 1.76
TRIM11Q96F44 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TRIM11Q96F44 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TRIM11Q96F44 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
TRIM11Q96F44 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TRIM11Q96F44 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
TRIM11Q96F44 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26■■□□□ 1.75
TRIM11Q96F44 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26■■□□□ 1.75
TRIM11Q96F44 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26■■□□□ 1.75
TRIM11Q96F44 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
TRIM11Q96F44 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
TRIM11Q96F44 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.99■■□□□ 1.75
TRIM11Q96F44 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
TRIM11Q96F44 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TRIM11Q96F44 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TRIM11Q96F44 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TRIM11Q96F44 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.98■■□□□ 1.75
TRIM11Q96F44 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
TRIM11Q96F44 DUSP8P4-201ENST00000399538 1761 ntBASIC25.97■■□□□ 1.75
TRIM11Q96F44 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TRIM11Q96F44 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TRIM11Q96F44 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TRIM11Q96F44 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms