Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.49■■■□□ 2.15
SH3TC2Q8TF17 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.49■■■□□ 2.15
SH3TC2Q8TF17 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.49■■■□□ 2.15
SH3TC2Q8TF17 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
SH3TC2Q8TF17 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.49■■■□□ 2.15
SH3TC2Q8TF17 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SH3TC2Q8TF17 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SH3TC2Q8TF17 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SH3TC2Q8TF17 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
SH3TC2Q8TF17 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.47■■■□□ 2.15
SH3TC2Q8TF17 AC103724.3-201ENST00000564481 992 ntBASIC28.47■■■□□ 2.15
SH3TC2Q8TF17 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.47■■■□□ 2.15
SH3TC2Q8TF17 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.46■■■□□ 2.15
SH3TC2Q8TF17 AL031848.2-201ENST00000607670 837 ntBASIC28.46■■■□□ 2.15
SH3TC2Q8TF17 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SH3TC2Q8TF17 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.45■■■□□ 2.15
SH3TC2Q8TF17 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
SH3TC2Q8TF17 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.45■■■□□ 2.14
SH3TC2Q8TF17 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
SH3TC2Q8TF17 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.45■■■□□ 2.14
SH3TC2Q8TF17 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.45■■■□□ 2.14
SH3TC2Q8TF17 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.44■■■□□ 2.14
SH3TC2Q8TF17 AC018755.3-202ENST00000596210 929 ntBASIC28.44■■■□□ 2.14
SH3TC2Q8TF17 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.44■■■□□ 2.14
SH3TC2Q8TF17 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.43■■■□□ 2.14
SH3TC2Q8TF17 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.43■■■□□ 2.14
SH3TC2Q8TF17 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.43■■■□□ 2.14
SH3TC2Q8TF17 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SH3TC2Q8TF17 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.43■■■□□ 2.14
SH3TC2Q8TF17 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SH3TC2Q8TF17 AC008406.3-201ENST00000620001 1374 ntBASIC28.42■■■□□ 2.14
SH3TC2Q8TF17 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.42■■■□□ 2.14
SH3TC2Q8TF17 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
SH3TC2Q8TF17 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SH3TC2Q8TF17 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.41■■■□□ 2.14
SH3TC2Q8TF17 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.41■■■□□ 2.14
SH3TC2Q8TF17 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SH3TC2Q8TF17 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.41■■■□□ 2.14
SH3TC2Q8TF17 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SH3TC2Q8TF17 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
SH3TC2Q8TF17 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SH3TC2Q8TF17 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.38■■■□□ 2.13
SH3TC2Q8TF17 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SH3TC2Q8TF17 AC239859.2-201ENST00000444165 318 ntBASIC28.38■■■□□ 2.13
SH3TC2Q8TF17 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.38■■■□□ 2.13
SH3TC2Q8TF17 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SH3TC2Q8TF17 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
SH3TC2Q8TF17 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.37■■■□□ 2.13
SH3TC2Q8TF17 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
SH3TC2Q8TF17 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SH3TC2Q8TF17 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
SH3TC2Q8TF17 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
SH3TC2Q8TF17 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.35■■■□□ 2.13
SH3TC2Q8TF17 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SH3TC2Q8TF17 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SH3TC2Q8TF17 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.34■■■□□ 2.13
SH3TC2Q8TF17 MIR3960-201ENST00000583311 91 ntBASIC28.34■■■□□ 2.13
SH3TC2Q8TF17 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SH3TC2Q8TF17 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
SH3TC2Q8TF17 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SH3TC2Q8TF17 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SH3TC2Q8TF17 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SH3TC2Q8TF17 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SH3TC2Q8TF17 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SH3TC2Q8TF17 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.33■■■□□ 2.13
SH3TC2Q8TF17 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SH3TC2Q8TF17 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
SH3TC2Q8TF17 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.33■■■□□ 2.13
SH3TC2Q8TF17 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
SH3TC2Q8TF17 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
SH3TC2Q8TF17 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
SH3TC2Q8TF17 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SH3TC2Q8TF17 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.32■■■□□ 2.12
SH3TC2Q8TF17 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.32■■■□□ 2.12
SH3TC2Q8TF17 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SH3TC2Q8TF17 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SH3TC2Q8TF17 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SH3TC2Q8TF17 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SH3TC2Q8TF17 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SH3TC2Q8TF17 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.29■■■□□ 2.12
SH3TC2Q8TF17 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.29■■■□□ 2.12
SH3TC2Q8TF17 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.28■■■□□ 2.12
SH3TC2Q8TF17 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.27■■■□□ 2.12
SH3TC2Q8TF17 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SH3TC2Q8TF17 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
SH3TC2Q8TF17 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SH3TC2Q8TF17 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SH3TC2Q8TF17 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.26■■■□□ 2.11
SH3TC2Q8TF17 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SH3TC2Q8TF17 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SH3TC2Q8TF17 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SH3TC2Q8TF17 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.25■■■□□ 2.11
SH3TC2Q8TF17 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
SH3TC2Q8TF17 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
SH3TC2Q8TF17 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.24■■■□□ 2.11
SH3TC2Q8TF17 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.24■■■□□ 2.11
SH3TC2Q8TF17 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
SH3TC2Q8TF17 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SH3TC2Q8TF17 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
SH3TC2Q8TF17 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms