Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
ARHGEF28Q8N1W1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
ARHGEF28Q8N1W1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
ARHGEF28Q8N1W1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC34.92■■■■□ 3.18
ARHGEF28Q8N1W1 RP9P-202ENST00000450133 1212 ntBASIC34.92■■■■□ 3.18
ARHGEF28Q8N1W1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC34.92■■■■□ 3.18
ARHGEF28Q8N1W1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
ARHGEF28Q8N1W1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC34.92■■■■□ 3.18
ARHGEF28Q8N1W1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
ARHGEF28Q8N1W1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC34.92■■■■□ 3.18
ARHGEF28Q8N1W1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC34.91■■■■□ 3.18
ARHGEF28Q8N1W1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC34.91■■■■□ 3.18
ARHGEF28Q8N1W1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC34.91■■■■□ 3.18
ARHGEF28Q8N1W1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC34.91■■■■□ 3.18
ARHGEF28Q8N1W1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC34.91■■■■□ 3.18
ARHGEF28Q8N1W1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC34.91■■■■□ 3.18
ARHGEF28Q8N1W1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC34.91■■■■□ 3.18
ARHGEF28Q8N1W1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC34.9■■■■□ 3.18
ARHGEF28Q8N1W1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
ARHGEF28Q8N1W1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
ARHGEF28Q8N1W1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC34.9■■■■□ 3.18
ARHGEF28Q8N1W1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
ARHGEF28Q8N1W1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
ARHGEF28Q8N1W1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
ARHGEF28Q8N1W1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
ARHGEF28Q8N1W1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
ARHGEF28Q8N1W1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
ARHGEF28Q8N1W1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
ARHGEF28Q8N1W1 WHAMMP3-201ENST00000611636 1609 ntBASIC34.88■■■■□ 3.17
ARHGEF28Q8N1W1 RARRES2P1-201ENST00000474487 481 ntBASIC34.87■■■■□ 3.17
ARHGEF28Q8N1W1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC34.87■■■■□ 3.17
ARHGEF28Q8N1W1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
ARHGEF28Q8N1W1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC34.87■■■■□ 3.17
ARHGEF28Q8N1W1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC34.85■■■■□ 3.17
ARHGEF28Q8N1W1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC34.85■■■■□ 3.17
ARHGEF28Q8N1W1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC34.84■■■■□ 3.17
ARHGEF28Q8N1W1 MIR3960-201ENST00000583311 91 ntBASIC34.84■■■■□ 3.17
ARHGEF28Q8N1W1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
ARHGEF28Q8N1W1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
ARHGEF28Q8N1W1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC34.83■■■■□ 3.17
ARHGEF28Q8N1W1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
ARHGEF28Q8N1W1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
ARHGEF28Q8N1W1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC34.81■■■■□ 3.16
ARHGEF28Q8N1W1 AL359504.2-201ENST00000605506 1601 ntBASIC34.81■■■■□ 3.16
ARHGEF28Q8N1W1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
ARHGEF28Q8N1W1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
ARHGEF28Q8N1W1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
ARHGEF28Q8N1W1 DRD5P2-201ENST00000421395 2012 ntBASIC34.8■■■■□ 3.16
ARHGEF28Q8N1W1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
ARHGEF28Q8N1W1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC34.8■■■■□ 3.16
ARHGEF28Q8N1W1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC34.8■■■■□ 3.16
ARHGEF28Q8N1W1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC34.8■■■■□ 3.16
ARHGEF28Q8N1W1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
ARHGEF28Q8N1W1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC34.79■■■■□ 3.16
ARHGEF28Q8N1W1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
ARHGEF28Q8N1W1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
ARHGEF28Q8N1W1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC34.79■■■■□ 3.16
ARHGEF28Q8N1W1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC34.79■■■■□ 3.16
ARHGEF28Q8N1W1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC34.79■■■■□ 3.16
ARHGEF28Q8N1W1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC34.79■■■■□ 3.16
ARHGEF28Q8N1W1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
ARHGEF28Q8N1W1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC34.78■■■■□ 3.16
ARHGEF28Q8N1W1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
ARHGEF28Q8N1W1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
ARHGEF28Q8N1W1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC34.78■■■■□ 3.16
ARHGEF28Q8N1W1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC34.77■■■■□ 3.16
ARHGEF28Q8N1W1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC34.77■■■■□ 3.16
ARHGEF28Q8N1W1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC34.77■■■■□ 3.16
ARHGEF28Q8N1W1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC34.77■■■■□ 3.16
ARHGEF28Q8N1W1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC34.76■■■■□ 3.15
ARHGEF28Q8N1W1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC34.75■■■■□ 3.15
ARHGEF28Q8N1W1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC34.75■■■■□ 3.15
ARHGEF28Q8N1W1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC34.75■■■■□ 3.15
ARHGEF28Q8N1W1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC34.75■■■■□ 3.15
ARHGEF28Q8N1W1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
ARHGEF28Q8N1W1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
ARHGEF28Q8N1W1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
ARHGEF28Q8N1W1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
ARHGEF28Q8N1W1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
ARHGEF28Q8N1W1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
ARHGEF28Q8N1W1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
ARHGEF28Q8N1W1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
ARHGEF28Q8N1W1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
ARHGEF28Q8N1W1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC34.72■■■■□ 3.15
ARHGEF28Q8N1W1 DUX4L18-201ENST00000553347 1267 ntBASIC34.72■■■■□ 3.15
ARHGEF28Q8N1W1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
ARHGEF28Q8N1W1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC34.71■■■■□ 3.15
ARHGEF28Q8N1W1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC34.71■■■■□ 3.15
ARHGEF28Q8N1W1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
ARHGEF28Q8N1W1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
ARHGEF28Q8N1W1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
ARHGEF28Q8N1W1 AL451085.2-201ENST00000605085 799 ntBASIC34.7■■■■□ 3.15
ARHGEF28Q8N1W1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC34.7■■■■□ 3.15
ARHGEF28Q8N1W1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
ARHGEF28Q8N1W1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
ARHGEF28Q8N1W1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC34.69■■■■□ 3.14
ARHGEF28Q8N1W1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
ARHGEF28Q8N1W1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
ARHGEF28Q8N1W1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
ARHGEF28Q8N1W1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC34.67■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms