Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DENND1BQ6P3S1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DENND1BQ6P3S1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DENND1BQ6P3S1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DENND1BQ6P3S1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
DENND1BQ6P3S1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DENND1BQ6P3S1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
DENND1BQ6P3S1 MIR4449-201ENST00000578365 66 ntBASIC26.28■■□□□ 1.8
DENND1BQ6P3S1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
DENND1BQ6P3S1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DENND1BQ6P3S1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.28■■□□□ 1.8
DENND1BQ6P3S1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
DENND1BQ6P3S1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.27■■□□□ 1.8
DENND1BQ6P3S1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
DENND1BQ6P3S1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.27■■□□□ 1.8
DENND1BQ6P3S1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
DENND1BQ6P3S1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.27■■□□□ 1.8
DENND1BQ6P3S1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DENND1BQ6P3S1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
DENND1BQ6P3S1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
DENND1BQ6P3S1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DENND1BQ6P3S1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
DENND1BQ6P3S1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DENND1BQ6P3S1 AL359258.2-201ENST00000564063 1566 ntBASIC26.25■■□□□ 1.79
DENND1BQ6P3S1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DENND1BQ6P3S1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DENND1BQ6P3S1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
DENND1BQ6P3S1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.25■■□□□ 1.79
DENND1BQ6P3S1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.25■■□□□ 1.79
DENND1BQ6P3S1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.25■■□□□ 1.79
DENND1BQ6P3S1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DENND1BQ6P3S1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DENND1BQ6P3S1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DENND1BQ6P3S1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.24■■□□□ 1.79
DENND1BQ6P3S1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.24■■□□□ 1.79
DENND1BQ6P3S1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DENND1BQ6P3S1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DENND1BQ6P3S1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DENND1BQ6P3S1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
DENND1BQ6P3S1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DENND1BQ6P3S1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DENND1BQ6P3S1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.22■■□□□ 1.79
DENND1BQ6P3S1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.22■■□□□ 1.79
DENND1BQ6P3S1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DENND1BQ6P3S1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.21■■□□□ 1.79
DENND1BQ6P3S1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.21■■□□□ 1.79
DENND1BQ6P3S1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DENND1BQ6P3S1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.79
DENND1BQ6P3S1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.2■■□□□ 1.78
DENND1BQ6P3S1 AP004609.3-201ENST00000610705 1884 ntBASIC26.2■■□□□ 1.78
DENND1BQ6P3S1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DENND1BQ6P3S1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.2■■□□□ 1.78
DENND1BQ6P3S1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.2■■□□□ 1.78
DENND1BQ6P3S1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DENND1BQ6P3S1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DENND1BQ6P3S1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DENND1BQ6P3S1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
DENND1BQ6P3S1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DENND1BQ6P3S1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DENND1BQ6P3S1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DENND1BQ6P3S1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.18■■□□□ 1.78
DENND1BQ6P3S1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DENND1BQ6P3S1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DENND1BQ6P3S1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DENND1BQ6P3S1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DENND1BQ6P3S1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DENND1BQ6P3S1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.17■■□□□ 1.78
DENND1BQ6P3S1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.17■■□□□ 1.78
DENND1BQ6P3S1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
DENND1BQ6P3S1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.16■■□□□ 1.78
DENND1BQ6P3S1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DENND1BQ6P3S1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
DENND1BQ6P3S1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
DENND1BQ6P3S1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DENND1BQ6P3S1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DENND1BQ6P3S1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
DENND1BQ6P3S1 AC142472.1-201ENST00000612013 1741 ntBASIC26.14■■□□□ 1.78
DENND1BQ6P3S1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.14■■□□□ 1.77
DENND1BQ6P3S1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DENND1BQ6P3S1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DENND1BQ6P3S1 AC060814.1-201ENST00000554326 538 ntBASIC26.13■■□□□ 1.77
DENND1BQ6P3S1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.13■■□□□ 1.77
DENND1BQ6P3S1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.13■■□□□ 1.77
DENND1BQ6P3S1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.12■■□□□ 1.77
DENND1BQ6P3S1 AC126177.7-201ENST00000547904 679 ntBASIC26.12■■□□□ 1.77
DENND1BQ6P3S1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DENND1BQ6P3S1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DENND1BQ6P3S1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.11■■□□□ 1.77
DENND1BQ6P3S1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
DENND1BQ6P3S1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.11■■□□□ 1.77
DENND1BQ6P3S1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
DENND1BQ6P3S1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
DENND1BQ6P3S1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.1■■□□□ 1.77
DENND1BQ6P3S1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
DENND1BQ6P3S1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DENND1BQ6P3S1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
DENND1BQ6P3S1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.09■■□□□ 1.77
DENND1BQ6P3S1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DENND1BQ6P3S1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
DENND1BQ6P3S1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms