Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARFGEF3Q5TH69 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARFGEF3Q5TH69 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARFGEF3Q5TH69 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ARFGEF3Q5TH69 RAP2CP1-202ENST00000605179 643 ntBASIC21.13■□□□□ 0.97
ARFGEF3Q5TH69 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARFGEF3Q5TH69 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.12■□□□□ 0.97
ARFGEF3Q5TH69 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARFGEF3Q5TH69 WHAMMP3-201ENST00000611636 1609 ntBASIC21.12■□□□□ 0.97
ARFGEF3Q5TH69 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ARFGEF3Q5TH69 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARFGEF3Q5TH69 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARFGEF3Q5TH69 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.11■□□□□ 0.97
ARFGEF3Q5TH69 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARFGEF3Q5TH69 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARFGEF3Q5TH69 TSPY13P-201ENST00000338964 914 ntBASIC21.11■□□□□ 0.97
ARFGEF3Q5TH69 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ARFGEF3Q5TH69 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ARFGEF3Q5TH69 AC133552.2-201ENST00000619106 1032 ntBASIC21.11■□□□□ 0.97
ARFGEF3Q5TH69 AL033527.3-201ENST00000566366 1196 ntBASIC21.1■□□□□ 0.97
ARFGEF3Q5TH69 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARFGEF3Q5TH69 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARFGEF3Q5TH69 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ARFGEF3Q5TH69 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARFGEF3Q5TH69 LINC01003-201ENST00000564834 1764 ntBASIC21.09■□□□□ 0.97
ARFGEF3Q5TH69 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.09■□□□□ 0.97
ARFGEF3Q5TH69 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARFGEF3Q5TH69 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ARFGEF3Q5TH69 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ARFGEF3Q5TH69 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ARFGEF3Q5TH69 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ARFGEF3Q5TH69 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ARFGEF3Q5TH69 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
ARFGEF3Q5TH69 SMPD5-203ENST00000639008 1464 ntBASIC21.07■□□□□ 0.96
ARFGEF3Q5TH69 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.07■□□□□ 0.96
ARFGEF3Q5TH69 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARFGEF3Q5TH69 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.07■□□□□ 0.96
ARFGEF3Q5TH69 AL592293.1-201ENST00000502889 1188 ntBASIC21.07■□□□□ 0.96
ARFGEF3Q5TH69 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ARFGEF3Q5TH69 AC129492.7-201ENST00000622992 756 ntBASIC21.07■□□□□ 0.96
ARFGEF3Q5TH69 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARFGEF3Q5TH69 AC009831.1-201ENST00000580420 1582 ntBASIC21.07■□□□□ 0.96
ARFGEF3Q5TH69 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ARFGEF3Q5TH69 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF3Q5TH69 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.06■□□□□ 0.96
ARFGEF3Q5TH69 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF3Q5TH69 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF3Q5TH69 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ARFGEF3Q5TH69 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARFGEF3Q5TH69 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.05■□□□□ 0.96
ARFGEF3Q5TH69 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARFGEF3Q5TH69 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARFGEF3Q5TH69 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARFGEF3Q5TH69 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ARFGEF3Q5TH69 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.04■□□□□ 0.96
ARFGEF3Q5TH69 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARFGEF3Q5TH69 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARFGEF3Q5TH69 AC004987.1-201ENST00000428627 508 ntBASIC21.04■□□□□ 0.96
ARFGEF3Q5TH69 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARFGEF3Q5TH69 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARFGEF3Q5TH69 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ARFGEF3Q5TH69 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARFGEF3Q5TH69 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARFGEF3Q5TH69 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARFGEF3Q5TH69 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ARFGEF3Q5TH69 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARFGEF3Q5TH69 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARFGEF3Q5TH69 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.02■□□□□ 0.96
ARFGEF3Q5TH69 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARFGEF3Q5TH69 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.02■□□□□ 0.95
ARFGEF3Q5TH69 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARFGEF3Q5TH69 ATP5G2P3-201ENST00000429083 425 ntBASIC21.01■□□□□ 0.95
ARFGEF3Q5TH69 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARFGEF3Q5TH69 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ARFGEF3Q5TH69 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.01■□□□□ 0.95
ARFGEF3Q5TH69 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ARFGEF3Q5TH69 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21■□□□□ 0.95
ARFGEF3Q5TH69 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21■□□□□ 0.95
ARFGEF3Q5TH69 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ARFGEF3Q5TH69 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARFGEF3Q5TH69 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ARFGEF3Q5TH69 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARFGEF3Q5TH69 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ARFGEF3Q5TH69 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.99■□□□□ 0.95
ARFGEF3Q5TH69 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ARFGEF3Q5TH69 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARFGEF3Q5TH69 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.98■□□□□ 0.95
ARFGEF3Q5TH69 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARFGEF3Q5TH69 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ARFGEF3Q5TH69 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ARFGEF3Q5TH69 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ARFGEF3Q5TH69 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ARFGEF3Q5TH69 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ARFGEF3Q5TH69 AL359504.2-201ENST00000605506 1601 ntBASIC20.97■□□□□ 0.95
ARFGEF3Q5TH69 DUX4L9-201ENST00000449051 1259 ntBASIC20.97■□□□□ 0.95
ARFGEF3Q5TH69 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF3Q5TH69 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF3Q5TH69 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF3Q5TH69 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ARFGEF3Q5TH69 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms