Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.17■■□□□ 1.3
PRICKLE4Q2TBC4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE4Q2TBC4 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.17■■□□□ 1.3
PRICKLE4Q2TBC4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE4Q2TBC4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PRICKLE4Q2TBC4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE4Q2TBC4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE4Q2TBC4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE4Q2TBC4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
PRICKLE4Q2TBC4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE4Q2TBC4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRICKLE4Q2TBC4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.16■■□□□ 1.3
PRICKLE4Q2TBC4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.15■■□□□ 1.3
PRICKLE4Q2TBC4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.15■■□□□ 1.3
PRICKLE4Q2TBC4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRICKLE4Q2TBC4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
PRICKLE4Q2TBC4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRICKLE4Q2TBC4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.14■■□□□ 1.29
PRICKLE4Q2TBC4 AL359258.2-201ENST00000564063 1566 ntBASIC23.14■■□□□ 1.29
PRICKLE4Q2TBC4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PRICKLE4Q2TBC4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PRICKLE4Q2TBC4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PRICKLE4Q2TBC4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.12■■□□□ 1.29
PRICKLE4Q2TBC4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRICKLE4Q2TBC4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRICKLE4Q2TBC4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PRICKLE4Q2TBC4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PRICKLE4Q2TBC4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRICKLE4Q2TBC4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.12■■□□□ 1.29
PRICKLE4Q2TBC4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRICKLE4Q2TBC4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.11■■□□□ 1.29
PRICKLE4Q2TBC4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRICKLE4Q2TBC4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PRICKLE4Q2TBC4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.11■■□□□ 1.29
PRICKLE4Q2TBC4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.11■■□□□ 1.29
PRICKLE4Q2TBC4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PRICKLE4Q2TBC4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRICKLE4Q2TBC4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRICKLE4Q2TBC4 AC126177.7-201ENST00000547904 679 ntBASIC23.1■■□□□ 1.29
PRICKLE4Q2TBC4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRICKLE4Q2TBC4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRICKLE4Q2TBC4 AP004609.3-201ENST00000610705 1884 ntBASIC23.09■■□□□ 1.29
PRICKLE4Q2TBC4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.09■■□□□ 1.29
PRICKLE4Q2TBC4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.09■■□□□ 1.29
PRICKLE4Q2TBC4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.08■■□□□ 1.29
PRICKLE4Q2TBC4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.08■■□□□ 1.29
PRICKLE4Q2TBC4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
PRICKLE4Q2TBC4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PRICKLE4Q2TBC4 AC142472.1-201ENST00000612013 1741 ntBASIC23.07■■□□□ 1.28
PRICKLE4Q2TBC4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PRICKLE4Q2TBC4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PRICKLE4Q2TBC4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PRICKLE4Q2TBC4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PRICKLE4Q2TBC4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.05■■□□□ 1.28
PRICKLE4Q2TBC4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PRICKLE4Q2TBC4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PRICKLE4Q2TBC4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRICKLE4Q2TBC4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PRICKLE4Q2TBC4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRICKLE4Q2TBC4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PRICKLE4Q2TBC4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PRICKLE4Q2TBC4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PRICKLE4Q2TBC4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PRICKLE4Q2TBC4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.04■■□□□ 1.28
PRICKLE4Q2TBC4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PRICKLE4Q2TBC4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.04■■□□□ 1.28
PRICKLE4Q2TBC4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.04■■□□□ 1.28
PRICKLE4Q2TBC4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PRICKLE4Q2TBC4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PRICKLE4Q2TBC4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PRICKLE4Q2TBC4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PRICKLE4Q2TBC4 AC060814.1-201ENST00000554326 538 ntBASIC23.03■■□□□ 1.28
PRICKLE4Q2TBC4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.03■■□□□ 1.28
PRICKLE4Q2TBC4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PRICKLE4Q2TBC4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PRICKLE4Q2TBC4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.02■■□□□ 1.28
PRICKLE4Q2TBC4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PRICKLE4Q2TBC4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.02■■□□□ 1.28
PRICKLE4Q2TBC4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PRICKLE4Q2TBC4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
PRICKLE4Q2TBC4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PRICKLE4Q2TBC4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PRICKLE4Q2TBC4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PRICKLE4Q2TBC4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.01■■□□□ 1.27
PRICKLE4Q2TBC4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PRICKLE4Q2TBC4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PRICKLE4Q2TBC4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23■■□□□ 1.27
PRICKLE4Q2TBC4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PRICKLE4Q2TBC4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PRICKLE4Q2TBC4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23■■□□□ 1.27
PRICKLE4Q2TBC4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23■■□□□ 1.27
PRICKLE4Q2TBC4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PRICKLE4Q2TBC4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PRICKLE4Q2TBC4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23■■□□□ 1.27
PRICKLE4Q2TBC4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PRICKLE4Q2TBC4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PRICKLE4Q2TBC4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PRICKLE4Q2TBC4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.98■■□□□ 1.27
PRICKLE4Q2TBC4 AL359504.2-201ENST00000605506 1601 ntBASIC22.98■■□□□ 1.27
PRICKLE4Q2TBC4 AC022413.1-201ENST00000624602 984 ntBASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms