Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SHROOM1Q2M3G4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.29■■■□□ 2.28
SHROOM1Q2M3G4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SHROOM1Q2M3G4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SHROOM1Q2M3G4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
SHROOM1Q2M3G4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.29■■■□□ 2.28
SHROOM1Q2M3G4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.29■■■□□ 2.28
SHROOM1Q2M3G4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
SHROOM1Q2M3G4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SHROOM1Q2M3G4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SHROOM1Q2M3G4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
SHROOM1Q2M3G4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SHROOM1Q2M3G4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
SHROOM1Q2M3G4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
SHROOM1Q2M3G4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SHROOM1Q2M3G4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
SHROOM1Q2M3G4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.26■■■□□ 2.27
SHROOM1Q2M3G4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
SHROOM1Q2M3G4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.26■■■□□ 2.27
SHROOM1Q2M3G4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
SHROOM1Q2M3G4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
SHROOM1Q2M3G4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
SHROOM1Q2M3G4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SHROOM1Q2M3G4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
SHROOM1Q2M3G4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SHROOM1Q2M3G4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
SHROOM1Q2M3G4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC29.23■■■□□ 2.27
SHROOM1Q2M3G4 RARRES2P1-201ENST00000474487 481 ntBASIC29.23■■■□□ 2.27
SHROOM1Q2M3G4 SPCS2P3-201ENST00000500401 656 ntBASIC29.23■■■□□ 2.27
SHROOM1Q2M3G4 AC093536.1-201ENST00000569153 554 ntBASIC29.23■■■□□ 2.27
SHROOM1Q2M3G4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.23■■■□□ 2.27
SHROOM1Q2M3G4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC29.23■■■□□ 2.27
SHROOM1Q2M3G4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.22■■■□□ 2.27
SHROOM1Q2M3G4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SHROOM1Q2M3G4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SHROOM1Q2M3G4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.22■■■□□ 2.27
SHROOM1Q2M3G4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.22■■■□□ 2.27
SHROOM1Q2M3G4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SHROOM1Q2M3G4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
SHROOM1Q2M3G4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
SHROOM1Q2M3G4 RAP2CP1-202ENST00000605179 643 ntBASIC29.21■■■□□ 2.27
SHROOM1Q2M3G4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.2■■■□□ 2.27
SHROOM1Q2M3G4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
SHROOM1Q2M3G4 RP9P-202ENST00000450133 1212 ntBASIC29.2■■■□□ 2.26
SHROOM1Q2M3G4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
SHROOM1Q2M3G4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SHROOM1Q2M3G4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.2■■■□□ 2.26
SHROOM1Q2M3G4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.2■■■□□ 2.26
SHROOM1Q2M3G4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
SHROOM1Q2M3G4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
SHROOM1Q2M3G4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
SHROOM1Q2M3G4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.18■■■□□ 2.26
SHROOM1Q2M3G4 DUX4L9-201ENST00000449051 1259 ntBASIC29.18■■■□□ 2.26
SHROOM1Q2M3G4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SHROOM1Q2M3G4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SHROOM1Q2M3G4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SHROOM1Q2M3G4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
SHROOM1Q2M3G4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.16■■■□□ 2.26
SHROOM1Q2M3G4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
SHROOM1Q2M3G4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SHROOM1Q2M3G4 DRD5P2-201ENST00000421395 2012 ntBASIC29.16■■■□□ 2.26
SHROOM1Q2M3G4 AL359504.2-201ENST00000605506 1601 ntBASIC29.16■■■□□ 2.26
SHROOM1Q2M3G4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.15■■■□□ 2.26
SHROOM1Q2M3G4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.15■■■□□ 2.26
SHROOM1Q2M3G4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.14■■■□□ 2.26
SHROOM1Q2M3G4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.13■■■□□ 2.25
SHROOM1Q2M3G4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
SHROOM1Q2M3G4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
SHROOM1Q2M3G4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SHROOM1Q2M3G4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
SHROOM1Q2M3G4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SHROOM1Q2M3G4 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.12■■■□□ 2.25
SHROOM1Q2M3G4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SHROOM1Q2M3G4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
SHROOM1Q2M3G4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
SHROOM1Q2M3G4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
SHROOM1Q2M3G4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.11■■■□□ 2.25
SHROOM1Q2M3G4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC29.11■■■□□ 2.25
SHROOM1Q2M3G4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC29.11■■■□□ 2.25
SHROOM1Q2M3G4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SHROOM1Q2M3G4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SHROOM1Q2M3G4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SHROOM1Q2M3G4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SHROOM1Q2M3G4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.1■■■□□ 2.25
SHROOM1Q2M3G4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
SHROOM1Q2M3G4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
SHROOM1Q2M3G4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SHROOM1Q2M3G4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.1■■■□□ 2.25
SHROOM1Q2M3G4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
SHROOM1Q2M3G4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
SHROOM1Q2M3G4 WHAMMP3-201ENST00000611636 1609 ntBASIC29.09■■■□□ 2.25
SHROOM1Q2M3G4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
SHROOM1Q2M3G4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.08■■■□□ 2.25
SHROOM1Q2M3G4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
SHROOM1Q2M3G4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SHROOM1Q2M3G4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
SHROOM1Q2M3G4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
SHROOM1Q2M3G4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
SHROOM1Q2M3G4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SHROOM1Q2M3G4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms