Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
NDUFB3O43676 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDUFB3O43676 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NDUFB3O43676 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NDUFB3O43676 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.63■□□□□ 0.89
NDUFB3O43676 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFB3O43676 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.63■□□□□ 0.89
NDUFB3O43676 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFB3O43676 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFB3O43676 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NDUFB3O43676 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFB3O43676 GPX1-201ENST00000419349 1106 ntBASIC20.62■□□□□ 0.89
NDUFB3O43676 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFB3O43676 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFB3O43676 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFB3O43676 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.61■□□□□ 0.89
NDUFB3O43676 AC060814.1-201ENST00000554326 538 ntBASIC20.61■□□□□ 0.89
NDUFB3O43676 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFB3O43676 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFB3O43676 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.6■□□□□ 0.89
NDUFB3O43676 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.6■□□□□ 0.89
NDUFB3O43676 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.6■□□□□ 0.89
NDUFB3O43676 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.6■□□□□ 0.89
NDUFB3O43676 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFB3O43676 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.6■□□□□ 0.89
NDUFB3O43676 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFB3O43676 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NDUFB3O43676 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NDUFB3O43676 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NDUFB3O43676 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
NDUFB3O43676 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
NDUFB3O43676 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.58■□□□□ 0.88
NDUFB3O43676 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
NDUFB3O43676 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFB3O43676 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NDUFB3O43676 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.57■□□□□ 0.88
NDUFB3O43676 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFB3O43676 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFB3O43676 AL449106.1-201ENST00000608517 1980 ntBASIC20.56■□□□□ 0.88
NDUFB3O43676 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFB3O43676 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFB3O43676 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.56■□□□□ 0.88
NDUFB3O43676 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDUFB3O43676 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NDUFB3O43676 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFB3O43676 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDUFB3O43676 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.55■□□□□ 0.88
NDUFB3O43676 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.55■□□□□ 0.88
NDUFB3O43676 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NDUFB3O43676 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NDUFB3O43676 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NDUFB3O43676 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFB3O43676 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFB3O43676 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFB3O43676 HSD17B1P1-201ENST00000590052 955 ntBASIC20.54■□□□□ 0.88
NDUFB3O43676 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFB3O43676 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NDUFB3O43676 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDUFB3O43676 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFB3O43676 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFB3O43676 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFB3O43676 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDUFB3O43676 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDUFB3O43676 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDUFB3O43676 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDUFB3O43676 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDUFB3O43676 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NDUFB3O43676 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
NDUFB3O43676 AC092296.2-201ENST00000589470 999 ntBASIC20.51■□□□□ 0.87
NDUFB3O43676 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NDUFB3O43676 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFB3O43676 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.5■□□□□ 0.87
NDUFB3O43676 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFB3O43676 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NDUFB3O43676 ECEL1P2-201ENST00000461596 1295 ntBASIC20.5■□□□□ 0.87
NDUFB3O43676 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.5■□□□□ 0.87
NDUFB3O43676 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NDUFB3O43676 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NDUFB3O43676 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NDUFB3O43676 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.49■□□□□ 0.87
NDUFB3O43676 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDUFB3O43676 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDUFB3O43676 RNF126P1-201ENST00000567452 1320 ntBASIC20.49■□□□□ 0.87
NDUFB3O43676 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NDUFB3O43676 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFB3O43676 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFB3O43676 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFB3O43676 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.47■□□□□ 0.87
NDUFB3O43676 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFB3O43676 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.47■□□□□ 0.87
NDUFB3O43676 AL157400.5-201ENST00000507624 621 ntBASIC20.47■□□□□ 0.87
NDUFB3O43676 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFB3O43676 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFB3O43676 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.47■□□□□ 0.87
NDUFB3O43676 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.47■□□□□ 0.87
NDUFB3O43676 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NDUFB3O43676 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFB3O43676 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.46■□□□□ 0.87
NDUFB3O43676 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.46■□□□□ 0.87
NDUFB3O43676 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms