Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.81■□□□□ 0.92
SIRPB1O00241 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIRPB1O00241 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.81■□□□□ 0.92
SIRPB1O00241 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SIRPB1O00241 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.8■□□□□ 0.92
SIRPB1O00241 AC008813.1-201ENST00000536597 885 ntBASIC20.8■□□□□ 0.92
SIRPB1O00241 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SIRPB1O00241 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIRPB1O00241 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIRPB1O00241 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.79■□□□□ 0.92
SIRPB1O00241 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIRPB1O00241 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.79■□□□□ 0.92
SIRPB1O00241 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIRPB1O00241 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPB1O00241 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPB1O00241 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.78■□□□□ 0.92
SIRPB1O00241 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPB1O00241 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPB1O00241 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SIRPB1O00241 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPB1O00241 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIRPB1O00241 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.77■□□□□ 0.92
SIRPB1O00241 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIRPB1O00241 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SIRPB1O00241 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIRPB1O00241 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIRPB1O00241 CR559946.2-201ENST00000623684 991 ntBASIC20.77■□□□□ 0.92
SIRPB1O00241 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.77■□□□□ 0.92
SIRPB1O00241 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.77■□□□□ 0.92
SIRPB1O00241 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.76■□□□□ 0.91
SIRPB1O00241 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIRPB1O00241 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIRPB1O00241 HLA-V-202ENST00000446817 847 ntBASIC20.76■□□□□ 0.91
SIRPB1O00241 MIR219A2-201ENST00000608502 1504 ntBASIC20.76■□□□□ 0.91
SIRPB1O00241 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIRPB1O00241 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIRPB1O00241 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIRPB1O00241 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.75■□□□□ 0.91
SIRPB1O00241 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SIRPB1O00241 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.74■□□□□ 0.91
SIRPB1O00241 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIRPB1O00241 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIRPB1O00241 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.74■□□□□ 0.91
SIRPB1O00241 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.74■□□□□ 0.91
SIRPB1O00241 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.74■□□□□ 0.91
SIRPB1O00241 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIRPB1O00241 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIRPB1O00241 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIRPB1O00241 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.73■□□□□ 0.91
SIRPB1O00241 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SIRPB1O00241 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIRPB1O00241 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SIRPB1O00241 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIRPB1O00241 AC142472.1-201ENST00000612013 1741 ntBASIC20.73■□□□□ 0.91
SIRPB1O00241 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.72■□□□□ 0.91
SIRPB1O00241 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIRPB1O00241 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.72■□□□□ 0.91
SIRPB1O00241 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SIRPB1O00241 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SIRPB1O00241 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIRPB1O00241 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.72■□□□□ 0.91
SIRPB1O00241 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIRPB1O00241 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.72■□□□□ 0.91
SIRPB1O00241 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SIRPB1O00241 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.72■□□□□ 0.91
SIRPB1O00241 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.72■□□□□ 0.91
SIRPB1O00241 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIRPB1O00241 AC148477.6-201ENST00000623746 465 ntBASIC20.72■□□□□ 0.91
SIRPB1O00241 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.72■□□□□ 0.91
SIRPB1O00241 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SIRPB1O00241 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIRPB1O00241 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIRPB1O00241 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIRPB1O00241 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.7■□□□□ 0.9
SIRPB1O00241 MIR3648-2-201ENST00000581792 180 ntBASIC20.7■□□□□ 0.9
SIRPB1O00241 MIR3648-1-201ENST00000615959 180 ntBASIC20.7■□□□□ 0.9
SIRPB1O00241 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIRPB1O00241 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIRPB1O00241 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIRPB1O00241 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SIRPB1O00241 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SIRPB1O00241 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SIRPB1O00241 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SIRPB1O00241 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIRPB1O00241 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SIRPB1O00241 AC091060.1-201ENST00000623524 1766 ntBASIC20.68■□□□□ 0.9
SIRPB1O00241 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.68■□□□□ 0.9
SIRPB1O00241 AC016575.1-201ENST00000607026 382 ntBASIC20.68■□□□□ 0.9
SIRPB1O00241 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SIRPB1O00241 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SIRPB1O00241 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SIRPB1O00241 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.67■□□□□ 0.9
SIRPB1O00241 MIR7108-201ENST00000614319 87 ntBASIC20.67■□□□□ 0.9
SIRPB1O00241 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.67■□□□□ 0.9
SIRPB1O00241 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SIRPB1O00241 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SIRPB1O00241 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.66■□□□□ 0.9
SIRPB1O00241 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIRPB1O00241 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.66■□□□□ 0.9
SIRPB1O00241 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms