Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRRM4A7MD48 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRRM4A7MD48 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SRRM4A7MD48 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRRM4A7MD48 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRRM4A7MD48 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRRM4A7MD48 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRRM4A7MD48 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
SRRM4A7MD48 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.89■□□□□ 0.77
SRRM4A7MD48 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.89■□□□□ 0.77
SRRM4A7MD48 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.89■□□□□ 0.77
SRRM4A7MD48 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRRM4A7MD48 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRRM4A7MD48 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SRRM4A7MD48 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRRM4A7MD48 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRRM4A7MD48 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.88■□□□□ 0.77
SRRM4A7MD48 AC008813.1-201ENST00000536597 885 ntBASIC19.88■□□□□ 0.77
SRRM4A7MD48 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.87■□□□□ 0.77
SRRM4A7MD48 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRRM4A7MD48 AC142472.1-201ENST00000612013 1741 ntBASIC19.87■□□□□ 0.77
SRRM4A7MD48 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM4A7MD48 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM4A7MD48 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM4A7MD48 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM4A7MD48 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.86■□□□□ 0.77
SRRM4A7MD48 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SRRM4A7MD48 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM4A7MD48 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.86■□□□□ 0.77
SRRM4A7MD48 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM4A7MD48 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.85■□□□□ 0.77
SRRM4A7MD48 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM4A7MD48 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM4A7MD48 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM4A7MD48 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM4A7MD48 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM4A7MD48 MIR219A2-201ENST00000608502 1504 ntBASIC19.85■□□□□ 0.77
SRRM4A7MD48 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.84■□□□□ 0.77
SRRM4A7MD48 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM4A7MD48 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM4A7MD48 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.84■□□□□ 0.77
SRRM4A7MD48 HLA-V-202ENST00000446817 847 ntBASIC19.84■□□□□ 0.77
SRRM4A7MD48 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM4A7MD48 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SRRM4A7MD48 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.84■□□□□ 0.77
SRRM4A7MD48 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.84■□□□□ 0.77
SRRM4A7MD48 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM4A7MD48 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRRM4A7MD48 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SRRM4A7MD48 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRRM4A7MD48 AC148477.6-201ENST00000623746 465 ntBASIC19.83■□□□□ 0.77
SRRM4A7MD48 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.83■□□□□ 0.77
SRRM4A7MD48 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SRRM4A7MD48 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SRRM4A7MD48 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SRRM4A7MD48 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SRRM4A7MD48 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRRM4A7MD48 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
SRRM4A7MD48 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRRM4A7MD48 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.82■□□□□ 0.76
SRRM4A7MD48 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.82■□□□□ 0.76
SRRM4A7MD48 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.82■□□□□ 0.76
SRRM4A7MD48 CR559946.2-201ENST00000623684 991 ntBASIC19.82■□□□□ 0.76
SRRM4A7MD48 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRRM4A7MD48 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.82■□□□□ 0.76
SRRM4A7MD48 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRRM4A7MD48 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRRM4A7MD48 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.81■□□□□ 0.76
SRRM4A7MD48 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.81■□□□□ 0.76
SRRM4A7MD48 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.81■□□□□ 0.76
SRRM4A7MD48 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SRRM4A7MD48 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SRRM4A7MD48 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.8■□□□□ 0.76
SRRM4A7MD48 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRRM4A7MD48 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SRRM4A7MD48 AC145676.1-201ENST00000514988 2004 ntBASIC19.8■□□□□ 0.76
SRRM4A7MD48 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SRRM4A7MD48 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRRM4A7MD48 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SRRM4A7MD48 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SRRM4A7MD48 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SRRM4A7MD48 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRRM4A7MD48 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRRM4A7MD48 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SRRM4A7MD48 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.79■□□□□ 0.76
SRRM4A7MD48 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.78■□□□□ 0.76
SRRM4A7MD48 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRRM4A7MD48 AC092803.2-201ENST00000564287 1899 ntBASIC19.78■□□□□ 0.76
SRRM4A7MD48 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRRM4A7MD48 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SRRM4A7MD48 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SRRM4A7MD48 MIR3648-2-201ENST00000581792 180 ntBASIC19.78■□□□□ 0.76
SRRM4A7MD48 MIR3648-1-201ENST00000615959 180 ntBASIC19.78■□□□□ 0.76
SRRM4A7MD48 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.77■□□□□ 0.76
SRRM4A7MD48 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SRRM4A7MD48 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SRRM4A7MD48 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.76■□□□□ 0.75
SRRM4A7MD48 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.76■□□□□ 0.75
SRRM4A7MD48 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SRRM4A7MD48 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms