Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC189A1A4V9 AC021231.2-201ENST00000594613 730 ntBASIC24.56■■□□□ 1.52
CCDC189A1A4V9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CCDC189A1A4V9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.56■■□□□ 1.52
CCDC189A1A4V9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC189A1A4V9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC189A1A4V9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC189A1A4V9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC189A1A4V9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC189A1A4V9 AC093323.1-202ENST00000635031 2045 ntBASIC24.53■■□□□ 1.52
CCDC189A1A4V9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CCDC189A1A4V9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC189A1A4V9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC189A1A4V9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC189A1A4V9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.53■■□□□ 1.52
CCDC189A1A4V9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CCDC189A1A4V9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
CCDC189A1A4V9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
CCDC189A1A4V9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.52■■□□□ 1.52
CCDC189A1A4V9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.52■■□□□ 1.52
CCDC189A1A4V9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC189A1A4V9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC189A1A4V9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC189A1A4V9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CCDC189A1A4V9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC189A1A4V9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC189A1A4V9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC189A1A4V9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC189A1A4V9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.5■■□□□ 1.51
CCDC189A1A4V9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC189A1A4V9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.49■■□□□ 1.51
CCDC189A1A4V9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.49■■□□□ 1.51
CCDC189A1A4V9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC189A1A4V9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CCDC189A1A4V9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.48■■□□□ 1.51
CCDC189A1A4V9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC189A1A4V9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CCDC189A1A4V9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CCDC189A1A4V9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CCDC189A1A4V9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC189A1A4V9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC189A1A4V9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC189A1A4V9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC189A1A4V9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.46■■□□□ 1.51
CCDC189A1A4V9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC189A1A4V9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC189A1A4V9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC189A1A4V9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CCDC189A1A4V9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC189A1A4V9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CCDC189A1A4V9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CCDC189A1A4V9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.45■■□□□ 1.5
CCDC189A1A4V9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CCDC189A1A4V9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC189A1A4V9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC189A1A4V9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC189A1A4V9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC189A1A4V9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.44■■□□□ 1.5
CCDC189A1A4V9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
CCDC189A1A4V9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.43■■□□□ 1.5
CCDC189A1A4V9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC189A1A4V9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC189A1A4V9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC189A1A4V9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC189A1A4V9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.43■■□□□ 1.5
CCDC189A1A4V9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC189A1A4V9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC189A1A4V9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.43■■□□□ 1.5
CCDC189A1A4V9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC189A1A4V9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.42■■□□□ 1.5
CCDC189A1A4V9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CCDC189A1A4V9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC189A1A4V9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CCDC189A1A4V9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.42■■□□□ 1.5
CCDC189A1A4V9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC189A1A4V9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC189A1A4V9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.42■■□□□ 1.5
CCDC189A1A4V9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC189A1A4V9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.41■■□□□ 1.5
CCDC189A1A4V9 LINC01971-201ENST00000617888 1048 ntBASIC24.41■■□□□ 1.5
CCDC189A1A4V9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC189A1A4V9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC189A1A4V9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC189A1A4V9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC189A1A4V9 AL449106.1-201ENST00000608517 1980 ntBASIC24.39■■□□□ 1.49
CCDC189A1A4V9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC189A1A4V9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.38■■□□□ 1.49
CCDC189A1A4V9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.37■■□□□ 1.49
CCDC189A1A4V9 CLDN5-201ENST00000403084 2357 ntBASIC24.37■■□□□ 1.49
CCDC189A1A4V9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC189A1A4V9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.37■■□□□ 1.49
CCDC189A1A4V9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC189A1A4V9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.37■■□□□ 1.49
CCDC189A1A4V9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.36■■□□□ 1.49
CCDC189A1A4V9 WHAMMP3-201ENST00000611636 1609 ntBASIC24.36■■□□□ 1.49
CCDC189A1A4V9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.36■■□□□ 1.49
CCDC189A1A4V9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC189A1A4V9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC189A1A4V9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CCDC189A1A4V9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms