Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV10A0A0B4J240 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV10A0A0B4J240 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV10A0A0B4J240 ATP5G2P3-201ENST00000429083 425 ntBASIC17.46■□□□□ 0.39
TRAV10A0A0B4J240 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV10A0A0B4J240 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV10A0A0B4J240 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV10A0A0B4J240 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV10A0A0B4J240 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV10A0A0B4J240 AC009831.1-201ENST00000580420 1582 ntBASIC17.45■□□□□ 0.38
TRAV10A0A0B4J240 AC139426.1-201ENST00000568218 2529 ntBASIC17.45■□□□□ 0.38
TRAV10A0A0B4J240 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRAV10A0A0B4J240 AC004987.1-201ENST00000428627 508 ntBASIC17.45■□□□□ 0.38
TRAV10A0A0B4J240 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.45■□□□□ 0.38
TRAV10A0A0B4J240 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV10A0A0B4J240 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV10A0A0B4J240 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV10A0A0B4J240 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV10A0A0B4J240 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV10A0A0B4J240 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV10A0A0B4J240 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV10A0A0B4J240 AL592293.1-201ENST00000502889 1188 ntBASIC17.44■□□□□ 0.38
TRAV10A0A0B4J240 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRAV10A0A0B4J240 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV10A0A0B4J240 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV10A0A0B4J240 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV10A0A0B4J240 AC093536.1-201ENST00000569153 554 ntBASIC17.43■□□□□ 0.38
TRAV10A0A0B4J240 AC026202.3-201ENST00000600805 1127 ntBASIC17.43■□□□□ 0.38
TRAV10A0A0B4J240 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV10A0A0B4J240 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV10A0A0B4J240 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAV10A0A0B4J240 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRAV10A0A0B4J240 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV10A0A0B4J240 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV10A0A0B4J240 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV10A0A0B4J240 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV10A0A0B4J240 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAV10A0A0B4J240 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRAV10A0A0B4J240 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV10A0A0B4J240 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV10A0A0B4J240 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV10A0A0B4J240 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV10A0A0B4J240 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV10A0A0B4J240 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV10A0A0B4J240 WHAMMP3-201ENST00000611636 1609 ntBASIC17.41■□□□□ 0.38
TRAV10A0A0B4J240 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV10A0A0B4J240 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV10A0A0B4J240 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV10A0A0B4J240 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV10A0A0B4J240 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV10A0A0B4J240 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV10A0A0B4J240 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV10A0A0B4J240 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV10A0A0B4J240 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV10A0A0B4J240 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV10A0A0B4J240 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV10A0A0B4J240 AC129492.7-201ENST00000622992 756 ntBASIC17.4■□□□□ 0.38
TRAV10A0A0B4J240 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRAV10A0A0B4J240 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV10A0A0B4J240 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV10A0A0B4J240 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV10A0A0B4J240 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV10A0A0B4J240 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV10A0A0B4J240 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV10A0A0B4J240 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV10A0A0B4J240 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV10A0A0B4J240 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV10A0A0B4J240 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV10A0A0B4J240 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAV10A0A0B4J240 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV10A0A0B4J240 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV10A0A0B4J240 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV10A0A0B4J240 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV10A0A0B4J240 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV10A0A0B4J240 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV10A0A0B4J240 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV10A0A0B4J240 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV10A0A0B4J240 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV10A0A0B4J240 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.36■□□□□ 0.37
TRAV10A0A0B4J240 RAP2CP1-202ENST00000605179 643 ntBASIC17.36■□□□□ 0.37
TRAV10A0A0B4J240 DUX4L18-201ENST00000553347 1267 ntBASIC17.35■□□□□ 0.37
TRAV10A0A0B4J240 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV10A0A0B4J240 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV10A0A0B4J240 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV10A0A0B4J240 AL359504.2-201ENST00000605506 1601 ntBASIC17.35■□□□□ 0.37
TRAV10A0A0B4J240 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV10A0A0B4J240 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV10A0A0B4J240 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms