Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 HLA-V-202ENST00000446817 847 ntBASIC29.71■■■□□ 2.35
UPF3BQ9BZI7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
UPF3BQ9BZI7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.71■■■□□ 2.35
UPF3BQ9BZI7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.71■■■□□ 2.35
UPF3BQ9BZI7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
UPF3BQ9BZI7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
UPF3BQ9BZI7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.69■■■□□ 2.34
UPF3BQ9BZI7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
UPF3BQ9BZI7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
UPF3BQ9BZI7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 AL449106.1-201ENST00000608517 1980 ntBASIC29.68■■■□□ 2.34
UPF3BQ9BZI7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
UPF3BQ9BZI7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
UPF3BQ9BZI7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
UPF3BQ9BZI7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
UPF3BQ9BZI7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.67■■■□□ 2.34
UPF3BQ9BZI7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
UPF3BQ9BZI7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.65■■■□□ 2.34
UPF3BQ9BZI7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.65■■■□□ 2.34
UPF3BQ9BZI7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
UPF3BQ9BZI7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.65■■■□□ 2.34
UPF3BQ9BZI7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.64■■■□□ 2.34
UPF3BQ9BZI7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
UPF3BQ9BZI7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.63■■■□□ 2.33
UPF3BQ9BZI7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.63■■■□□ 2.33
UPF3BQ9BZI7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
UPF3BQ9BZI7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
UPF3BQ9BZI7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
UPF3BQ9BZI7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.61■■■□□ 2.33
UPF3BQ9BZI7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
UPF3BQ9BZI7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
UPF3BQ9BZI7 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.6■■■□□ 2.33
UPF3BQ9BZI7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.59■■■□□ 2.33
UPF3BQ9BZI7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
UPF3BQ9BZI7 LINC01971-201ENST00000617888 1048 ntBASIC29.59■■■□□ 2.33
UPF3BQ9BZI7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.59■■■□□ 2.33
UPF3BQ9BZI7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
UPF3BQ9BZI7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
UPF3BQ9BZI7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.57■■■□□ 2.32
UPF3BQ9BZI7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
UPF3BQ9BZI7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
UPF3BQ9BZI7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.56■■■□□ 2.32
UPF3BQ9BZI7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
UPF3BQ9BZI7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.55■■■□□ 2.32
UPF3BQ9BZI7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
UPF3BQ9BZI7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.55■■■□□ 2.32
UPF3BQ9BZI7 AP004609.3-201ENST00000610705 1884 ntBASIC29.55■■■□□ 2.32
UPF3BQ9BZI7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.54■■■□□ 2.32
UPF3BQ9BZI7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
UPF3BQ9BZI7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
UPF3BQ9BZI7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.52■■■□□ 2.32
UPF3BQ9BZI7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.52■■■□□ 2.32
UPF3BQ9BZI7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
UPF3BQ9BZI7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.52■■■□□ 2.32
UPF3BQ9BZI7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
UPF3BQ9BZI7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC29.51■■■□□ 2.32
UPF3BQ9BZI7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L13-201ENST00000554103 1267 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L15-201ENST00000611059 1267 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L23-201ENST00000615195 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L24-201ENST00000617576 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L22-201ENST00000618238 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L20-201ENST00000619712 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L21-201ENST00000622058 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L10-201ENST00000622460 1267 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 DUX4L25-201ENST00000624915 1269 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 AC091060.1-201ENST00000623524 1766 ntBASIC29.51■■■□□ 2.31
UPF3BQ9BZI7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
UPF3BQ9BZI7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.5■■■□□ 2.31
UPF3BQ9BZI7 WHAMMP3-201ENST00000611636 1609 ntBASIC29.49■■■□□ 2.31
UPF3BQ9BZI7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
UPF3BQ9BZI7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 DUX4L11-201ENST00000611504 1267 ntBASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 DUX4L12-201ENST00000614593 1267 ntBASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 DUX4L14-201ENST00000621227 1267 ntBASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
UPF3BQ9BZI7 ZNRF2P2-203ENST00000454624 420 ntBASIC29.47■■■□□ 2.31
UPF3BQ9BZI7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
UPF3BQ9BZI7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.46■■■□□ 2.31
UPF3BQ9BZI7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.45■■■□□ 2.31
UPF3BQ9BZI7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
UPF3BQ9BZI7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.45■■■□□ 2.31
UPF3BQ9BZI7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms