Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TMEM40Q8WWA1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TMEM40Q8WWA1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TMEM40Q8WWA1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TMEM40Q8WWA1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TMEM40Q8WWA1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TMEM40Q8WWA1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TMEM40Q8WWA1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TMEM40Q8WWA1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TMEM40Q8WWA1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
TMEM40Q8WWA1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TMEM40Q8WWA1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TMEM40Q8WWA1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.47■■□□□ 1.99
TMEM40Q8WWA1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
TMEM40Q8WWA1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TMEM40Q8WWA1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
TMEM40Q8WWA1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TMEM40Q8WWA1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TMEM40Q8WWA1 AC007029.1-201ENST00000604183 313 ntBASIC27.46■■□□□ 1.99
TMEM40Q8WWA1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
TMEM40Q8WWA1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TMEM40Q8WWA1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
TMEM40Q8WWA1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.45■■□□□ 1.99
TMEM40Q8WWA1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TMEM40Q8WWA1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.44■■□□□ 1.98
TMEM40Q8WWA1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
TMEM40Q8WWA1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.44■■□□□ 1.98
TMEM40Q8WWA1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
TMEM40Q8WWA1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.43■■□□□ 1.98
TMEM40Q8WWA1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TMEM40Q8WWA1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
TMEM40Q8WWA1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.43■■□□□ 1.98
TMEM40Q8WWA1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TMEM40Q8WWA1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TMEM40Q8WWA1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.42■■□□□ 1.98
TMEM40Q8WWA1 AC004987.1-201ENST00000428627 508 ntBASIC27.42■■□□□ 1.98
TMEM40Q8WWA1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
TMEM40Q8WWA1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TMEM40Q8WWA1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
TMEM40Q8WWA1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
TMEM40Q8WWA1 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.41■■□□□ 1.98
TMEM40Q8WWA1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.41■■□□□ 1.98
TMEM40Q8WWA1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TMEM40Q8WWA1 SMPD5-203ENST00000639008 1464 ntBASIC27.39■■□□□ 1.98
TMEM40Q8WWA1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
TMEM40Q8WWA1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.97
TMEM40Q8WWA1 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.39■■□□□ 1.97
TMEM40Q8WWA1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TMEM40Q8WWA1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.38■■□□□ 1.97
TMEM40Q8WWA1 ATP5G2P3-201ENST00000429083 425 ntBASIC27.38■■□□□ 1.97
TMEM40Q8WWA1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.38■■□□□ 1.97
TMEM40Q8WWA1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TMEM40Q8WWA1 AC009831.1-201ENST00000580420 1582 ntBASIC27.38■■□□□ 1.97
TMEM40Q8WWA1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
TMEM40Q8WWA1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TMEM40Q8WWA1 AC025884.2-201ENST00000553429 711 ntBASIC27.37■■□□□ 1.97
TMEM40Q8WWA1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TMEM40Q8WWA1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.37■■□□□ 1.97
TMEM40Q8WWA1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
TMEM40Q8WWA1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TMEM40Q8WWA1 TSPY13P-201ENST00000338964 914 ntBASIC27.36■■□□□ 1.97
TMEM40Q8WWA1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TMEM40Q8WWA1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.36■■□□□ 1.97
TMEM40Q8WWA1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
TMEM40Q8WWA1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
TMEM40Q8WWA1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TMEM40Q8WWA1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.35■■□□□ 1.97
TMEM40Q8WWA1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TMEM40Q8WWA1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
TMEM40Q8WWA1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TMEM40Q8WWA1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
TMEM40Q8WWA1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
TMEM40Q8WWA1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TMEM40Q8WWA1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.34■■□□□ 1.97
TMEM40Q8WWA1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
TMEM40Q8WWA1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
TMEM40Q8WWA1 AC139426.1-201ENST00000568218 2529 ntBASIC27.33■■□□□ 1.97
TMEM40Q8WWA1 AL592293.1-201ENST00000502889 1188 ntBASIC27.33■■□□□ 1.97
TMEM40Q8WWA1 AC133552.2-201ENST00000619106 1032 ntBASIC27.33■■□□□ 1.97
TMEM40Q8WWA1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
TMEM40Q8WWA1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TMEM40Q8WWA1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TMEM40Q8WWA1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.32■■□□□ 1.96
TMEM40Q8WWA1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TMEM40Q8WWA1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.32■■□□□ 1.96
TMEM40Q8WWA1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
TMEM40Q8WWA1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.31■■□□□ 1.96
TMEM40Q8WWA1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TMEM40Q8WWA1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.31■■□□□ 1.96
TMEM40Q8WWA1 AC129492.7-201ENST00000622992 756 ntBASIC27.31■■□□□ 1.96
TMEM40Q8WWA1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.31■■□□□ 1.96
TMEM40Q8WWA1 AC026202.3-201ENST00000600805 1127 ntBASIC27.3■■□□□ 1.96
TMEM40Q8WWA1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
TMEM40Q8WWA1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMEM40Q8WWA1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMEM40Q8WWA1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMEM40Q8WWA1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
TMEM40Q8WWA1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
TMEM40Q8WWA1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TMEM40Q8WWA1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms