Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ATP6AP1LQ52LC2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24■■□□□ 1.43
ATP6AP1LQ52LC2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24■■□□□ 1.43
ATP6AP1LQ52LC2 AC110285.7-201ENST00000624417 1536 ntBASIC24■■□□□ 1.43
ATP6AP1LQ52LC2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ATP6AP1LQ52LC2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.99■■□□□ 1.43
ATP6AP1LQ52LC2 AL162393.1-201ENST00000437852 946 ntBASIC23.99■■□□□ 1.43
ATP6AP1LQ52LC2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6AP1LQ52LC2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
ATP6AP1LQ52LC2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.98■■□□□ 1.43
ATP6AP1LQ52LC2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6AP1LQ52LC2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.98■■□□□ 1.43
ATP6AP1LQ52LC2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATP6AP1LQ52LC2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
ATP6AP1LQ52LC2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATP6AP1LQ52LC2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP6AP1LQ52LC2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATP6AP1LQ52LC2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP6AP1LQ52LC2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP6AP1LQ52LC2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
ATP6AP1LQ52LC2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ATP6AP1LQ52LC2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ATP6AP1LQ52LC2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
ATP6AP1LQ52LC2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
ATP6AP1LQ52LC2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
ATP6AP1LQ52LC2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ATP6AP1LQ52LC2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ATP6AP1LQ52LC2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.94■■□□□ 1.42
ATP6AP1LQ52LC2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ATP6AP1LQ52LC2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ATP6AP1LQ52LC2 AP004609.3-201ENST00000610705 1884 ntBASIC23.94■■□□□ 1.42
ATP6AP1LQ52LC2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
ATP6AP1LQ52LC2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
ATP6AP1LQ52LC2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ATP6AP1LQ52LC2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.93■■□□□ 1.42
ATP6AP1LQ52LC2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ATP6AP1LQ52LC2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
ATP6AP1LQ52LC2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.93■■□□□ 1.42
ATP6AP1LQ52LC2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ATP6AP1LQ52LC2 AC145676.1-201ENST00000514988 2004 ntBASIC23.93■■□□□ 1.42
ATP6AP1LQ52LC2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
ATP6AP1LQ52LC2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
ATP6AP1LQ52LC2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.92■■□□□ 1.42
ATP6AP1LQ52LC2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.92■■□□□ 1.42
ATP6AP1LQ52LC2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ATP6AP1LQ52LC2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
ATP6AP1LQ52LC2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ATP6AP1LQ52LC2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6AP1LQ52LC2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.9■■□□□ 1.42
ATP6AP1LQ52LC2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6AP1LQ52LC2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
ATP6AP1LQ52LC2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.9■■□□□ 1.42
ATP6AP1LQ52LC2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.9■■□□□ 1.42
ATP6AP1LQ52LC2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
ATP6AP1LQ52LC2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ATP6AP1LQ52LC2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.89■■□□□ 1.41
ATP6AP1LQ52LC2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ATP6AP1LQ52LC2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ATP6AP1LQ52LC2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP6AP1LQ52LC2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.87■■□□□ 1.41
ATP6AP1LQ52LC2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ATP6AP1LQ52LC2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
ATP6AP1LQ52LC2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ATP6AP1LQ52LC2 AC021231.2-201ENST00000594613 730 ntBASIC23.86■■□□□ 1.41
ATP6AP1LQ52LC2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.86■■□□□ 1.41
ATP6AP1LQ52LC2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
ATP6AP1LQ52LC2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ATP6AP1LQ52LC2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
ATP6AP1LQ52LC2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.85■■□□□ 1.41
ATP6AP1LQ52LC2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ATP6AP1LQ52LC2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ATP6AP1LQ52LC2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ATP6AP1LQ52LC2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ATP6AP1LQ52LC2 AC135731.1-201ENST00000569415 2548 ntBASIC23.84■■□□□ 1.41
ATP6AP1LQ52LC2 DUX4L29-201ENST00000425409 679 ntBASIC23.83■■□□□ 1.41
ATP6AP1LQ52LC2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.83■■□□□ 1.41
ATP6AP1LQ52LC2 WHAMMP3-201ENST00000611636 1609 ntBASIC23.83■■□□□ 1.41
ATP6AP1LQ52LC2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ATP6AP1LQ52LC2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ATP6AP1LQ52LC2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ATP6AP1LQ52LC2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.82■■□□□ 1.4
ATP6AP1LQ52LC2 AC092803.2-201ENST00000564287 1899 ntBASIC23.82■■□□□ 1.4
ATP6AP1LQ52LC2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.82■■□□□ 1.4
ATP6AP1LQ52LC2 AC142472.1-201ENST00000612013 1741 ntBASIC23.81■■□□□ 1.4
ATP6AP1LQ52LC2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.81■■□□□ 1.4
ATP6AP1LQ52LC2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP6AP1LQ52LC2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP6AP1LQ52LC2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP6AP1LQ52LC2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ATP6AP1LQ52LC2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
ATP6AP1LQ52LC2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.79■■□□□ 1.4
ATP6AP1LQ52LC2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.79■■□□□ 1.4
ATP6AP1LQ52LC2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP6AP1LQ52LC2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.79■■□□□ 1.4
ATP6AP1LQ52LC2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP6AP1LQ52LC2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP6AP1LQ52LC2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.79■■□□□ 1.4
ATP6AP1LQ52LC2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP6AP1LQ52LC2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ATP6AP1LQ52LC2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms