Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.99■■□□□ 1.43
HMGCS1Q01581 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HMGCS1Q01581 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HMGCS1Q01581 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.99■■□□□ 1.43
HMGCS1Q01581 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
HMGCS1Q01581 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.98■■□□□ 1.43
HMGCS1Q01581 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
HMGCS1Q01581 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.98■■□□□ 1.43
HMGCS1Q01581 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
HMGCS1Q01581 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HMGCS1Q01581 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
HMGCS1Q01581 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
HMGCS1Q01581 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.96■■□□□ 1.43
HMGCS1Q01581 AL449106.1-201ENST00000608517 1980 ntBASIC23.96■■□□□ 1.43
HMGCS1Q01581 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.96■■□□□ 1.43
HMGCS1Q01581 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
HMGCS1Q01581 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
HMGCS1Q01581 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.95■■□□□ 1.43
HMGCS1Q01581 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
HMGCS1Q01581 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.95■■□□□ 1.42
HMGCS1Q01581 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
HMGCS1Q01581 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.95■■□□□ 1.42
HMGCS1Q01581 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.95■■□□□ 1.42
HMGCS1Q01581 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
HMGCS1Q01581 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
HMGCS1Q01581 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
HMGCS1Q01581 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HMGCS1Q01581 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HMGCS1Q01581 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
HMGCS1Q01581 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
HMGCS1Q01581 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.93■■□□□ 1.42
HMGCS1Q01581 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.93■■□□□ 1.42
HMGCS1Q01581 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.93■■□□□ 1.42
HMGCS1Q01581 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.93■■□□□ 1.42
HMGCS1Q01581 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
HMGCS1Q01581 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.92■■□□□ 1.42
HMGCS1Q01581 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.92■■□□□ 1.42
HMGCS1Q01581 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.92■■□□□ 1.42
HMGCS1Q01581 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
HMGCS1Q01581 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.91■■□□□ 1.42
HMGCS1Q01581 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HMGCS1Q01581 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
HMGCS1Q01581 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
HMGCS1Q01581 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
HMGCS1Q01581 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HMGCS1Q01581 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HMGCS1Q01581 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.89■■□□□ 1.41
HMGCS1Q01581 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.89■■□□□ 1.41
HMGCS1Q01581 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS1Q01581 AP004609.3-201ENST00000610705 1884 ntBASIC23.88■■□□□ 1.41
HMGCS1Q01581 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS1Q01581 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS1Q01581 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.88■■□□□ 1.41
HMGCS1Q01581 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
HMGCS1Q01581 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.88■■□□□ 1.41
HMGCS1Q01581 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.88■■□□□ 1.41
HMGCS1Q01581 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCS1Q01581 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCS1Q01581 LINC01971-201ENST00000617888 1048 ntBASIC23.87■■□□□ 1.41
HMGCS1Q01581 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCS1Q01581 AC091060.1-201ENST00000623524 1766 ntBASIC23.86■■□□□ 1.41
HMGCS1Q01581 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.86■■□□□ 1.41
HMGCS1Q01581 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS1Q01581 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCS1Q01581 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
HMGCS1Q01581 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.85■■□□□ 1.41
HMGCS1Q01581 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.85■■□□□ 1.41
HMGCS1Q01581 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.85■■□□□ 1.41
HMGCS1Q01581 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGCS1Q01581 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HMGCS1Q01581 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
HMGCS1Q01581 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HMGCS1Q01581 WHAMMP3-201ENST00000611636 1609 ntBASIC23.83■■□□□ 1.41
HMGCS1Q01581 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HMGCS1Q01581 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.82■■□□□ 1.4
HMGCS1Q01581 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.82■■□□□ 1.4
HMGCS1Q01581 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.81■■□□□ 1.4
HMGCS1Q01581 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HMGCS1Q01581 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.8■■□□□ 1.4
HMGCS1Q01581 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
HMGCS1Q01581 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMGCS1Q01581 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMGCS1Q01581 DUX4L13-201ENST00000554103 1267 ntBASIC23.79■■□□□ 1.4
HMGCS1Q01581 DUX4L15-201ENST00000611059 1267 ntBASIC23.79■■□□□ 1.4
HMGCS1Q01581 DUX4L23-201ENST00000615195 1269 ntBASIC23.79■■□□□ 1.4
HMGCS1Q01581 DUX4L24-201ENST00000617576 1269 ntBASIC23.79■■□□□ 1.4
HMGCS1Q01581 DUX4L22-201ENST00000618238 1269 ntBASIC23.79■■□□□ 1.4
HMGCS1Q01581 DUX4L20-201ENST00000619712 1269 ntBASIC23.79■■□□□ 1.4
HMGCS1Q01581 DUX4L21-201ENST00000622058 1269 ntBASIC23.79■■□□□ 1.4
HMGCS1Q01581 DUX4L10-201ENST00000622460 1267 ntBASIC23.79■■□□□ 1.4
HMGCS1Q01581 DUX4L25-201ENST00000624915 1269 ntBASIC23.79■■□□□ 1.4
HMGCS1Q01581 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
HMGCS1Q01581 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
HMGCS1Q01581 ABHD17AP4-201ENST00000411545 909 ntBASIC23.78■■□□□ 1.4
HMGCS1Q01581 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.78■■□□□ 1.4
HMGCS1Q01581 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMGCS1Q01581 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
HMGCS1Q01581 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HMGCS1Q01581 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HMGCS1Q01581 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms